Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MIR1262-201ENST00000408276 93 ntBASIC2.48□□□□□ -2.01
TRIM43Q96BQ3 Y_RNA.602-201ENST00000410535 92 ntBASIC2.48□□□□□ -2.01
TRIM43Q96BQ3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.48□□□□□ -2.01
TRIM43Q96BQ3 AC008134.1-201ENST00000420943 193 ntBASIC2.48□□□□□ -2.01
TRIM43Q96BQ3 MTCO1P44-201ENST00000441935 243 ntBASIC2.48□□□□□ -2.01
TRIM43Q96BQ3 RNU6-221P-201ENST00000459541 99 ntBASIC2.48□□□□□ -2.01
TRIM43Q96BQ3 SEPT14P8-201ENST00000508026 178 ntBASIC2.48□□□□□ -2.01
TRIM43Q96BQ3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.48□□□□□ -2.01
TRIM43Q96BQ3 RNA5SP82-201ENST00000516707 92 ntBASIC2.48□□□□□ -2.01
TRIM43Q96BQ3 AP002001.1-203ENST00000534002 267 ntBASIC2.48□□□□□ -2.01
TRIM43Q96BQ3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM43Q96BQ3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.48□□□□□ -2.01
TRIM43Q96BQ3 AC055872.1-201ENST00000570978 278 ntBASIC2.48□□□□□ -2.01
TRIM43Q96BQ3 MIR4498-201ENST00000577599 66 ntBASIC2.48□□□□□ -2.01
TRIM43Q96BQ3 SNORD113-5-201ENST00000607261 78 ntBASIC2.48□□□□□ -2.01
TRIM43Q96BQ3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.48□□□□□ -2.01
TRIM43Q96BQ3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
TRIM43Q96BQ3 ZNF271P-202ENST00000465539 1970 ntBASIC2.47□□□□□ -2.01
TRIM43Q96BQ3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
TRIM43Q96BQ3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
TRIM43Q96BQ3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TRIM43Q96BQ3 SNORD115-3-201ENST00000363100 82 ntBASIC2.47□□□□□ -2.01
TRIM43Q96BQ3 Y_RNA.144-201ENST00000363521 113 ntBASIC2.47□□□□□ -2.01
TRIM43Q96BQ3 Y_RNA.331-201ENST00000365267 102 ntBASIC2.47□□□□□ -2.01
TRIM43Q96BQ3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.47□□□□□ -2.01
TRIM43Q96BQ3 RNU6-196P-201ENST00000384315 107 ntBASIC2.47□□□□□ -2.01
TRIM43Q96BQ3 RNU6-121P-201ENST00000410525 99 ntBASIC2.47□□□□□ -2.01
TRIM43Q96BQ3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM43Q96BQ3 AC096920.1-201ENST00000423991 241 ntBASIC2.47□□□□□ -2.01
TRIM43Q96BQ3 AC005042.3-201ENST00000453230 174 ntBASIC2.47□□□□□ -2.01
TRIM43Q96BQ3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.47□□□□□ -2.01
TRIM43Q96BQ3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM43Q96BQ3 MIR3684-201ENST00000579779 74 ntBASIC2.47□□□□□ -2.01
TRIM43Q96BQ3 AL031274.2-201ENST00000599419 203 ntBASIC2.47□□□□□ -2.01
TRIM43Q96BQ3 AC022441.3-201ENST00000605737 136 ntBASIC2.47□□□□□ -2.01
TRIM43Q96BQ3 AC006001.4-201ENST00000622243 395 ntBASIC2.47□□□□□ -2.01
TRIM43Q96BQ3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.47□□□□□ -2.01
TRIM43Q96BQ3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
TRIM43Q96BQ3 Y_RNA.26-201ENST00000362539 101 ntBASIC2.46□□□□□ -2.02
TRIM43Q96BQ3 Y_RNA.101-201ENST00000363154 102 ntBASIC2.46□□□□□ -2.02
TRIM43Q96BQ3 Y_RNA.222-201ENST00000364264 102 ntBASIC2.46□□□□□ -2.02
TRIM43Q96BQ3 Y_RNA.512-201ENST00000384518 102 ntBASIC2.46□□□□□ -2.02
TRIM43Q96BQ3 MIR29C-201ENST00000385231 88 ntBASIC2.46□□□□□ -2.02
TRIM43Q96BQ3 RNU4-30P-201ENST00000410245 143 ntBASIC2.46□□□□□ -2.02
TRIM43Q96BQ3 RNU2-54P-201ENST00000410299 190 ntBASIC2.46□□□□□ -2.02
TRIM43Q96BQ3 RPL21P38-201ENST00000418090 167 ntBASIC2.46□□□□□ -2.02
TRIM43Q96BQ3 RNU6-155P-201ENST00000516347 100 ntBASIC2.46□□□□□ -2.02
TRIM43Q96BQ3 RNA5SP137-201ENST00000516833 135 ntBASIC2.46□□□□□ -2.02
TRIM43Q96BQ3 MYL12BP1-201ENST00000569826 507 ntBASIC2.46□□□□□ -2.02
TRIM43Q96BQ3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.46□□□□□ -2.02
TRIM43Q96BQ3 MIR8062-201ENST00000621515 85 ntBASIC2.46□□□□□ -2.02
TRIM43Q96BQ3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
TRIM43Q96BQ3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
TRIM43Q96BQ3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.45□□□□□ -2.02
TRIM43Q96BQ3 Y_RNA.446-201ENST00000384178 104 ntBASIC2.45□□□□□ -2.02
TRIM43Q96BQ3 MIR1302-6-201ENST00000408466 90 ntBASIC2.45□□□□□ -2.02
TRIM43Q96BQ3 SNORA11.4-201ENST00000408823 129 ntBASIC2.45□□□□□ -2.02
TRIM43Q96BQ3 RNU6-1053P-201ENST00000515930 101 ntBASIC2.45□□□□□ -2.02
TRIM43Q96BQ3 RNU6-856P-201ENST00000516959 98 ntBASIC2.45□□□□□ -2.02
TRIM43Q96BQ3 AC087441.2-201ENST00000529141 262 ntBASIC2.45□□□□□ -2.02
TRIM43Q96BQ3 AL161670.1-201ENST00000554348 137 ntBASIC2.45□□□□□ -2.02
TRIM43Q96BQ3 AC022202.1-201ENST00000613515 211 ntBASIC2.45□□□□□ -2.02
TRIM43Q96BQ3 7SK.10-201ENST00000621414 298 ntBASIC2.45□□□□□ -2.02
TRIM43Q96BQ3 RNU4-90P-201ENST00000362773 141 ntBASIC2.44□□□□□ -2.02
TRIM43Q96BQ3 RNU6-454P-201ENST00000364292 107 ntBASIC2.44□□□□□ -2.02
TRIM43Q96BQ3 Y_RNA.461-201ENST00000384263 103 ntBASIC2.44□□□□□ -2.02
TRIM43Q96BQ3 RNU6-463P-201ENST00000384340 107 ntBASIC2.44□□□□□ -2.02
TRIM43Q96BQ3 Y_RNA.556-201ENST00000384677 113 ntBASIC2.44□□□□□ -2.02
TRIM43Q96BQ3 Y_RNA.581-201ENST00000391017 97 ntBASIC2.44□□□□□ -2.02
TRIM43Q96BQ3 MIR1287-201ENST00000408492 90 ntBASIC2.44□□□□□ -2.02
TRIM43Q96BQ3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.44□□□□□ -2.02
TRIM43Q96BQ3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.44□□□□□ -2.02
TRIM43Q96BQ3 AC098869.1-201ENST00000481627 292 ntBASIC2.44□□□□□ -2.02
TRIM43Q96BQ3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TRIM43Q96BQ3 AC108729.3-201ENST00000513484 108 ntBASIC2.44□□□□□ -2.02
TRIM43Q96BQ3 RNU6-570P-201ENST00000517051 105 ntBASIC2.44□□□□□ -2.02
TRIM43Q96BQ3 RNU2-12P-201ENST00000517216 168 ntBASIC2.44□□□□□ -2.02
TRIM43Q96BQ3 AC025647.1-201ENST00000517879 253 ntBASIC2.44□□□□□ -2.02
TRIM43Q96BQ3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.44□□□□□ -2.02
TRIM43Q96BQ3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.44□□□□□ -2.02
TRIM43Q96BQ3 MIR6845-201ENST00000613182 61 ntBASIC2.44□□□□□ -2.02
TRIM43Q96BQ3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TRIM43Q96BQ3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
TRIM43Q96BQ3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
TRIM43Q96BQ3 MIR340-201ENST00000362125 95 ntBASIC2.43□□□□□ -2.02
TRIM43Q96BQ3 MIR568-201ENST00000385036 95 ntBASIC2.43□□□□□ -2.02
TRIM43Q96BQ3 SNORA40.19-201ENST00000390846 128 ntBASIC2.43□□□□□ -2.02
TRIM43Q96BQ3 RNA5SP270-201ENST00000411361 118 ntBASIC2.43□□□□□ -2.02
TRIM43Q96BQ3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.43□□□□□ -2.02
TRIM43Q96BQ3 SUMO1P2-201ENST00000452524 304 ntBASIC2.43□□□□□ -2.02
TRIM43Q96BQ3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.43□□□□□ -2.02
TRIM43Q96BQ3 RNU1-131P-201ENST00000458943 161 ntBASIC2.43□□□□□ -2.02
TRIM43Q96BQ3 RNU6-496P-201ENST00000516145 99 ntBASIC2.43□□□□□ -2.02
TRIM43Q96BQ3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.43□□□□□ -2.02
TRIM43Q96BQ3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.43□□□□□ -2.02
TRIM43Q96BQ3 MIR4781-201ENST00000585250 76 ntBASIC2.43□□□□□ -2.02
TRIM43Q96BQ3 SNORD14A-201ENST00000606526 91 ntBASIC2.43□□□□□ -2.02
TRIM43Q96BQ3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.43□□□□□ -2.02
TRIM43Q96BQ3 AC245884.12-201ENST00000615364 59 ntBASIC2.43□□□□□ -2.02
TRIM43Q96BQ3 AC245060.5-201ENST00000610778 3293 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms