Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RNU2-54P-201ENST00000410299 190 ntBASIC2.21□□□□□ -2.06
HMGB4Q8WW32 RNU2-20P-201ENST00000410425 191 ntBASIC2.21□□□□□ -2.06
HMGB4Q8WW32 ELOCP20-201ENST00000422460 345 ntBASIC2.21□□□□□ -2.06
HMGB4Q8WW32 ATP5J2P3-201ENST00000451550 258 ntBASIC2.21□□□□□ -2.06
HMGB4Q8WW32 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.21□□□□□ -2.06
HMGB4Q8WW32 RPL23AP42-201ENST00000471152 471 ntBASIC2.21□□□□□ -2.06
HMGB4Q8WW32 AC107222.1-201ENST00000510899 637 ntBASIC2.21□□□□□ -2.06
HMGB4Q8WW32 RNU6-1041P-201ENST00000516254 102 ntBASIC2.21□□□□□ -2.06
HMGB4Q8WW32 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.21□□□□□ -2.06
HMGB4Q8WW32 SUMO2P18-201ENST00000518873 252 ntBASIC2.21□□□□□ -2.06
HMGB4Q8WW32 AP005660.1-201ENST00000522972 293 ntBASIC2.21□□□□□ -2.06
HMGB4Q8WW32 MIR4529-201ENST00000578110 78 ntBASIC2.21□□□□□ -2.06
HMGB4Q8WW32 MIR3684-201ENST00000579779 74 ntBASIC2.21□□□□□ -2.06
HMGB4Q8WW32 AL049779.4-201ENST00000604500 156 ntBASIC2.21□□□□□ -2.06
HMGB4Q8WW32 AC022441.3-201ENST00000605737 136 ntBASIC2.21□□□□□ -2.06
HMGB4Q8WW32 AL353149.1-201ENST00000610667 244 ntBASIC2.21□□□□□ -2.06
HMGB4Q8WW32 AC012640.5-201ENST00000623897 319 ntBASIC2.21□□□□□ -2.06
HMGB4Q8WW32 U6.115-201ENST00000636045 103 ntBASIC2.21□□□□□ -2.06
HMGB4Q8WW32 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
HMGB4Q8WW32 AL356292.1-201ENST00000283110 373 ntBASIC2.2□□□□□ -2.06
HMGB4Q8WW32 RNU6-1266P-201ENST00000362794 105 ntBASIC2.2□□□□□ -2.06
HMGB4Q8WW32 RNA5SP450-201ENST00000411206 102 ntBASIC2.2□□□□□ -2.06
HMGB4Q8WW32 RNU6-1199P-201ENST00000411249 104 ntBASIC2.2□□□□□ -2.06
HMGB4Q8WW32 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.2□□□□□ -2.06
HMGB4Q8WW32 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.2□□□□□ -2.06
HMGB4Q8WW32 SNORD65B-201ENST00000459126 73 ntBASIC2.2□□□□□ -2.06
HMGB4Q8WW32 RNU6-966P-201ENST00000516479 104 ntBASIC2.2□□□□□ -2.06
HMGB4Q8WW32 SNORA40.15-201ENST00000516884 107 ntBASIC2.2□□□□□ -2.06
HMGB4Q8WW32 RNU2-19P-201ENST00000517288 84 ntBASIC2.2□□□□□ -2.06
HMGB4Q8WW32 MIR4300-201ENST00000581016 96 ntBASIC2.2□□□□□ -2.06
HMGB4Q8WW32 AC005786.1-201ENST00000588553 154 ntBASIC2.2□□□□□ -2.06
HMGB4Q8WW32 AC136443.5-201ENST00000603741 370 ntBASIC2.2□□□□□ -2.06
HMGB4Q8WW32 AC005828.6-201ENST00000606610 232 ntBASIC2.2□□□□□ -2.06
HMGB4Q8WW32 MIR203B-201ENST00000636080 86 ntBASIC2.2□□□□□ -2.06
HMGB4Q8WW32 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.2□□□□□ -2.06
HMGB4Q8WW32 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
HMGB4Q8WW32 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
HMGB4Q8WW32 snoU2-30.2-201ENST00000362805 70 ntBASIC2.19□□□□□ -2.06
HMGB4Q8WW32 Y_RNA.105-201ENST00000363182 111 ntBASIC2.19□□□□□ -2.06
HMGB4Q8WW32 RNU6-770P-201ENST00000363929 105 ntBASIC2.19□□□□□ -2.06
HMGB4Q8WW32 Y_RNA.243-201ENST00000364481 109 ntBASIC2.19□□□□□ -2.06
HMGB4Q8WW32 Y_RNA.446-201ENST00000384178 104 ntBASIC2.19□□□□□ -2.06
HMGB4Q8WW32 SNORD115-46-201ENST00000390982 71 ntBASIC2.19□□□□□ -2.06
HMGB4Q8WW32 AL117342.1-201ENST00000404861 406 ntBASIC2.19□□□□□ -2.06
HMGB4Q8WW32 AL355796.1-201ENST00000406706 323 ntBASIC2.19□□□□□ -2.06
HMGB4Q8WW32 MIR548F4-201ENST00000408515 105 ntBASIC2.19□□□□□ -2.06
HMGB4Q8WW32 RNU6-121P-201ENST00000410525 99 ntBASIC2.19□□□□□ -2.06
HMGB4Q8WW32 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGB4Q8WW32 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HMGB4Q8WW32 AL390729.2-201ENST00000416137 156 ntBASIC2.19□□□□□ -2.06
HMGB4Q8WW32 HMGN2P34-201ENST00000437647 269 ntBASIC2.19□□□□□ -2.06
HMGB4Q8WW32 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HMGB4Q8WW32 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
HMGB4Q8WW32 MTATP8P1-201ENST00000467115 207 ntBASIC2.19□□□□□ -2.06
HMGB4Q8WW32 AC055731.1-201ENST00000474387 401 ntBASIC2.19□□□□□ -2.06
HMGB4Q8WW32 AC010598.1-201ENST00000510378 103 ntBASIC2.19□□□□□ -2.06
HMGB4Q8WW32 AC025465.3-201ENST00000510570 311 ntBASIC2.19□□□□□ -2.06
HMGB4Q8WW32 RNU6-1045P-201ENST00000516321 107 ntBASIC2.19□□□□□ -2.06
HMGB4Q8WW32 RNU6-548P-201ENST00000517083 115 ntBASIC2.19□□□□□ -2.06
HMGB4Q8WW32 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.19□□□□□ -2.06
HMGB4Q8WW32 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGB4Q8WW32 MIR376A1-201ENST00000616574 68 ntBASIC2.19□□□□□ -2.06
HMGB4Q8WW32 AL353997.5-201ENST00000618886 171 ntBASIC2.19□□□□□ -2.06
HMGB4Q8WW32 MIR338-201ENST00000636369 67 ntBASIC2.19□□□□□ -2.06
HMGB4Q8WW32 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
HMGB4Q8WW32 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HMGB4Q8WW32 SNORD115-30-201ENST00000364117 82 ntBASIC2.18□□□□□ -2.06
HMGB4Q8WW32 Y_RNA.287-201ENST00000364853 94 ntBASIC2.18□□□□□ -2.06
HMGB4Q8WW32 RNU6-1109P-201ENST00000391187 107 ntBASIC2.18□□□□□ -2.06
HMGB4Q8WW32 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.18□□□□□ -2.06
HMGB4Q8WW32 RNU6-1146P-201ENST00000516282 102 ntBASIC2.18□□□□□ -2.06
HMGB4Q8WW32 RNA5SP200-201ENST00000516360 103 ntBASIC2.18□□□□□ -2.06
HMGB4Q8WW32 SCARNA16.3-201ENST00000516595 184 ntBASIC2.18□□□□□ -2.06
HMGB4Q8WW32 AC011373.1-201ENST00000607270 237 ntBASIC2.18□□□□□ -2.06
HMGB4Q8WW32 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HMGB4Q8WW32 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HMGB4Q8WW32 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HMGB4Q8WW32 Y_RNA.19-201ENST00000362462 99 ntBASIC2.17□□□□□ -2.06
HMGB4Q8WW32 Y_RNA.26-201ENST00000362539 101 ntBASIC2.17□□□□□ -2.06
HMGB4Q8WW32 RNU6-806P-201ENST00000365147 105 ntBASIC2.17□□□□□ -2.06
HMGB4Q8WW32 Y_RNA.361-201ENST00000365515 120 ntBASIC2.17□□□□□ -2.06
HMGB4Q8WW32 SNORA20B-201ENST00000384220 132 ntBASIC2.17□□□□□ -2.06
HMGB4Q8WW32 Y_RNA.459-201ENST00000384251 102 ntBASIC2.17□□□□□ -2.06
HMGB4Q8WW32 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
HMGB4Q8WW32 MIR1253-201ENST00000408273 105 ntBASIC2.17□□□□□ -2.06
HMGB4Q8WW32 RPL23AP36-201ENST00000413895 458 ntBASIC2.17□□□□□ -2.06
HMGB4Q8WW32 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.17□□□□□ -2.06
HMGB4Q8WW32 AC099677.2-201ENST00000436385 175 ntBASIC2.17□□□□□ -2.06
HMGB4Q8WW32 MTND2P29-201ENST00000438595 412 ntBASIC2.17□□□□□ -2.06
HMGB4Q8WW32 AL731563.1-201ENST00000442202 214 ntBASIC2.17□□□□□ -2.06
HMGB4Q8WW32 AC005042.3-201ENST00000453230 174 ntBASIC2.17□□□□□ -2.06
HMGB4Q8WW32 LINC01399-202ENST00000458450 244 ntBASIC2.17□□□□□ -2.06
HMGB4Q8WW32 RNY3P15-201ENST00000516297 97 ntBASIC2.17□□□□□ -2.06
HMGB4Q8WW32 RNU6-155P-201ENST00000516347 100 ntBASIC2.17□□□□□ -2.06
HMGB4Q8WW32 RNU7-110P-201ENST00000516891 62 ntBASIC2.17□□□□□ -2.06
HMGB4Q8WW32 AL117187.1-201ENST00000555482 181 ntBASIC2.17□□□□□ -2.06
HMGB4Q8WW32 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.17□□□□□ -2.06
HMGB4Q8WW32 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGB4Q8WW32 AC008749.1-201ENST00000597650 306 ntBASIC2.17□□□□□ -2.06
HMGB4Q8WW32 AC006380.1-201ENST00000603598 186 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 247 ms