Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 FGF7P4-201ENST00000509595 295 ntBASIC1.52□□□□□ -2.17
CDX1P47902 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.52□□□□□ -2.17
CDX1P47902 MIR8063-201ENST00000621930 81 ntBASIC1.52□□□□□ -2.17
CDX1P47902 MIR3674-201ENST00000636576 68 ntBASIC1.52□□□□□ -2.17
CDX1P47902 U6.108-201ENST00000637764 58 ntBASIC1.52□□□□□ -2.17
CDX1P47902 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CDX1P47902 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CDX1P47902 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
CDX1P47902 Y_RNA.67-201ENST00000362870 100 ntBASIC1.51□□□□□ -2.17
CDX1P47902 RNY3P11-201ENST00000364153 102 ntBASIC1.51□□□□□ -2.17
CDX1P47902 Y_RNA.263-201ENST00000364659 114 ntBASIC1.51□□□□□ -2.17
CDX1P47902 RNU6-926P-201ENST00000384075 107 ntBASIC1.51□□□□□ -2.17
CDX1P47902 RNU6-1310P-201ENST00000384153 107 ntBASIC1.51□□□□□ -2.17
CDX1P47902 SNORA20B-201ENST00000384220 132 ntBASIC1.51□□□□□ -2.17
CDX1P47902 MIR583-201ENST00000384846 75 ntBASIC1.51□□□□□ -2.17
CDX1P47902 U8.13-201ENST00000390842 128 ntBASIC1.51□□□□□ -2.17
CDX1P47902 MRPS18CP6-201ENST00000423587 223 ntBASIC1.51□□□□□ -2.17
CDX1P47902 RAB28P5-201ENST00000427490 651 ntBASIC1.51□□□□□ -2.17
CDX1P47902 AC099799.1-201ENST00000439809 192 ntBASIC1.51□□□□□ -2.17
CDX1P47902 AC007677.1-201ENST00000445757 515 ntBASIC1.51□□□□□ -2.17
CDX1P47902 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.51□□□□□ -2.17
CDX1P47902 AC027575.1-201ENST00000481064 460 ntBASIC1.51□□□□□ -2.17
CDX1P47902 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.51□□□□□ -2.17
CDX1P47902 RNU6-408P-201ENST00000515910 100 ntBASIC1.51□□□□□ -2.17
CDX1P47902 RNU6-699P-201ENST00000517081 110 ntBASIC1.51□□□□□ -2.17
CDX1P47902 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.51□□□□□ -2.17
CDX1P47902 SNORA77B-201ENST00000578179 125 ntBASIC1.51□□□□□ -2.17
CDX1P47902 MIR5089-201ENST00000580047 84 ntBASIC1.51□□□□□ -2.17
CDX1P47902 MIR4285-201ENST00000581001 85 ntBASIC1.51□□□□□ -2.17
CDX1P47902 AC095038.3-201ENST00000634439 195 ntBASIC1.51□□□□□ -2.17
CDX1P47902 MTND5P10-201ENST00000603719 1809 ntBASIC1.51□□□□□ -2.17
CDX1P47902 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CDX1P47902 ICE2P2-201ENST00000483823 2787 ntBASIC1.51□□□□□ -2.17
CDX1P47902 RNU6-407P-201ENST00000365280 104 ntBASIC1.5□□□□□ -2.17
CDX1P47902 RNY3P14-201ENST00000384309 102 ntBASIC1.5□□□□□ -2.17
CDX1P47902 RNU6-997P-201ENST00000384725 107 ntBASIC1.5□□□□□ -2.17
CDX1P47902 MIR628-201ENST00000385229 95 ntBASIC1.5□□□□□ -2.17
CDX1P47902 SNORA26.9-201ENST00000391322 122 ntBASIC1.5□□□□□ -2.17
CDX1P47902 AC236972.2-201ENST00000434979 310 ntBASIC1.5□□□□□ -2.17
CDX1P47902 MRPS10P1-201ENST00000448483 130 ntBASIC1.5□□□□□ -2.17
CDX1P47902 snoU13.23-201ENST00000458863 104 ntBASIC1.5□□□□□ -2.17
CDX1P47902 RPS26P45-201ENST00000471748 340 ntBASIC1.5□□□□□ -2.17
CDX1P47902 RNU6-295P-201ENST00000516901 104 ntBASIC1.5□□□□□ -2.17
CDX1P47902 CBX3P4-201ENST00000538909 354 ntBASIC1.5□□□□□ -2.17
CDX1P47902 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.5□□□□□ -2.17
CDX1P47902 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.5□□□□□ -2.17
CDX1P47902 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.5□□□□□ -2.17
CDX1P47902 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CDX1P47902 Y_RNA.146-201ENST00000363549 102 ntBASIC1.49□□□□□ -2.17
CDX1P47902 Y_RNA.187-201ENST00000363918 113 ntBASIC1.49□□□□□ -2.17
CDX1P47902 RNU4-42P-201ENST00000364738 142 ntBASIC1.49□□□□□ -2.17
CDX1P47902 RNU6-338P-201ENST00000383888 105 ntBASIC1.49□□□□□ -2.17
CDX1P47902 RNU6-1040P-201ENST00000383974 107 ntBASIC1.49□□□□□ -2.17
CDX1P47902 RNU6-203P-201ENST00000384038 104 ntBASIC1.49□□□□□ -2.17
CDX1P47902 MIR559-201ENST00000385188 96 ntBASIC1.49□□□□□ -2.17
CDX1P47902 AL355796.1-201ENST00000406706 323 ntBASIC1.49□□□□□ -2.17
CDX1P47902 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.49□□□□□ -2.17
CDX1P47902 AC010154.1-201ENST00000425857 269 ntBASIC1.49□□□□□ -2.17
CDX1P47902 AC245047.3-201ENST00000429428 127 ntBASIC1.49□□□□□ -2.17
CDX1P47902 AL606517.2-201ENST00000442855 241 ntBASIC1.49□□□□□ -2.17
CDX1P47902 RNU7-94P-201ENST00000459576 63 ntBASIC1.49□□□□□ -2.17
CDX1P47902 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.49□□□□□ -2.17
CDX1P47902 AC107393.1-201ENST00000512403 346 ntBASIC1.49□□□□□ -2.17
CDX1P47902 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.49□□□□□ -2.17
CDX1P47902 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.49□□□□□ -2.17
CDX1P47902 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.49□□□□□ -2.17
CDX1P47902 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.49□□□□□ -2.17
CDX1P47902 RPL21P9-201ENST00000556149 474 ntBASIC1.49□□□□□ -2.17
CDX1P47902 AP001094.1-201ENST00000579805 193 ntBASIC1.49□□□□□ -2.17
CDX1P47902 AL929325.1-201ENST00000603096 117 ntBASIC1.49□□□□□ -2.17
CDX1P47902 U2.1-201ENST00000618978 145 ntBASIC1.49□□□□□ -2.17
CDX1P47902 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.49□□□□□ -2.17
CDX1P47902 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
CDX1P47902 RNU6-271P-201ENST00000363858 105 ntBASIC1.48□□□□□ -2.17
CDX1P47902 Y_RNA.428-201ENST00000384078 102 ntBASIC1.48□□□□□ -2.17
CDX1P47902 RNU11-5P-201ENST00000391216 129 ntBASIC1.48□□□□□ -2.17
CDX1P47902 RN7SKP200-201ENST00000410564 320 ntBASIC1.48□□□□□ -2.17
CDX1P47902 AC096644.2-201ENST00000429278 159 ntBASIC1.48□□□□□ -2.17
CDX1P47902 AL591806.2-201ENST00000433122 173 ntBASIC1.48□□□□□ -2.17
CDX1P47902 RPS27P1-201ENST00000450552 247 ntBASIC1.48□□□□□ -2.17
CDX1P47902 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.48□□□□□ -2.17
CDX1P47902 SNORD19B-201ENST00000459623 84 ntBASIC1.48□□□□□ -2.17
CDX1P47902 RNA5SP20-201ENST00000515976 84 ntBASIC1.48□□□□□ -2.17
CDX1P47902 RNU7-172P-201ENST00000517125 64 ntBASIC1.48□□□□□ -2.17
CDX1P47902 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.48□□□□□ -2.17
CDX1P47902 AL442163.3-201ENST00000554110 156 ntBASIC1.48□□□□□ -2.17
CDX1P47902 AC110588.1-201ENST00000559699 137 ntBASIC1.48□□□□□ -2.17
CDX1P47902 MIR4524B-201ENST00000581569 115 ntBASIC1.48□□□□□ -2.17
CDX1P47902 AC022217.4-201ENST00000604389 163 ntBASIC1.48□□□□□ -2.17
CDX1P47902 Y_RNA.804-201ENST00000615262 101 ntBASIC1.48□□□□□ -2.17
CDX1P47902 MIR8054-201ENST00000620877 86 ntBASIC1.48□□□□□ -2.17
CDX1P47902 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.48□□□□□ -2.17
CDX1P47902 U6.115-201ENST00000636045 103 ntBASIC1.48□□□□□ -2.17
CDX1P47902 AC112487.2-201ENST00000637950 304 ntBASIC1.48□□□□□ -2.17
CDX1P47902 MIR410-201ENST00000362222 80 ntBASIC1.47□□□□□ -2.17
CDX1P47902 RNU1-78P-201ENST00000391248 165 ntBASIC1.47□□□□□ -2.17
CDX1P47902 MRPL42P3-201ENST00000401492 326 ntBASIC1.47□□□□□ -2.17
CDX1P47902 MTCO3P19-201ENST00000415864 321 ntBASIC1.47□□□□□ -2.17
CDX1P47902 FCF1P4-201ENST00000448326 183 ntBASIC1.47□□□□□ -2.17
CDX1P47902 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms