Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 MIR140-201ENST00000385282 100 ntBASIC0.16□□□□□ -2.38
UBBP0CG47 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.16□□□□□ -2.38
UBBP0CG47 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.16□□□□□ -2.38
UBBP0CG47 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.16□□□□□ -2.38
UBBP0CG47 MTCO2P19-201ENST00000427513 598 ntBASIC0.16□□□□□ -2.38
UBBP0CG47 TPTE2P5-203ENST00000458118 728 ntBASIC0.16□□□□□ -2.38
UBBP0CG47 MTCO1P29-201ENST00000496868 288 ntBASIC0.16□□□□□ -2.38
UBBP0CG47 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.16□□□□□ -2.38
UBBP0CG47 SNORA25.14-201ENST00000516481 132 ntBASIC0.16□□□□□ -2.38
UBBP0CG47 RNU7-172P-201ENST00000517125 64 ntBASIC0.16□□□□□ -2.38
UBBP0CG47 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.16□□□□□ -2.38
UBBP0CG47 AC016957.1-201ENST00000534895 309 ntBASIC0.16□□□□□ -2.38
UBBP0CG47 AC100830.2-201ENST00000581636 240 ntBASIC0.16□□□□□ -2.38
UBBP0CG47 MIR4452-201ENST00000583004 71 ntBASIC0.16□□□□□ -2.38
UBBP0CG47 AC092747.3-201ENST00000603769 301 ntBASIC0.16□□□□□ -2.38
UBBP0CG47 AC008536.2-201ENST00000607284 349 ntBASIC0.16□□□□□ -2.38
UBBP0CG47 AL158063.1-201ENST00000615349 536 ntBASIC0.16□□□□□ -2.38
UBBP0CG47 SNORD113-7-201ENST00000363762 77 ntBASIC0.15□□□□□ -2.39
UBBP0CG47 RNU4-41P-201ENST00000364426 143 ntBASIC0.15□□□□□ -2.39
UBBP0CG47 RNU6-117P-201ENST00000365415 107 ntBASIC0.15□□□□□ -2.39
UBBP0CG47 RNU6-38P-201ENST00000384085 107 ntBASIC0.15□□□□□ -2.39
UBBP0CG47 RNU6-1103P-201ENST00000384150 107 ntBASIC0.15□□□□□ -2.39
UBBP0CG47 RNU6-342P-201ENST00000384521 104 ntBASIC0.15□□□□□ -2.39
UBBP0CG47 MIR521-1-201ENST00000384902 87 ntBASIC0.15□□□□□ -2.39
UBBP0CG47 RNU6-159P-201ENST00000391080 106 ntBASIC0.15□□□□□ -2.39
UBBP0CG47 AL606923.1-201ENST00000406616 190 ntBASIC0.15□□□□□ -2.39
UBBP0CG47 AL392103.1-201ENST00000447000 198 ntBASIC0.15□□□□□ -2.39
UBBP0CG47 SNRPGP9-201ENST00000456025 225 ntBASIC0.15□□□□□ -2.39
UBBP0CG47 AC093303.1-201ENST00000514549 295 ntBASIC0.15□□□□□ -2.39
UBBP0CG47 SNORA40.12-201ENST00000516329 111 ntBASIC0.15□□□□□ -2.39
UBBP0CG47 RNU6-1038P-201ENST00000516516 104 ntBASIC0.15□□□□□ -2.39
UBBP0CG47 MTCO2P4-201ENST00000517968 247 ntBASIC0.15□□□□□ -2.39
UBBP0CG47 AF235103.2-201ENST00000525753 346 ntBASIC0.15□□□□□ -2.39
UBBP0CG47 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.15□□□□□ -2.39
UBBP0CG47 MIR4711-201ENST00000578274 70 ntBASIC0.15□□□□□ -2.39
UBBP0CG47 AL357078.3-201ENST00000607528 618 ntBASIC0.15□□□□□ -2.39
UBBP0CG47 AC068137.4-201ENST00000638485 296 ntBASIC0.15□□□□□ -2.39
UBBP0CG47 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
UBBP0CG47 AC090625.1-201ENST00000357130 210 ntBASIC0.14□□□□□ -2.39
UBBP0CG47 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
UBBP0CG47 Y_RNA.201-201ENST00000364052 96 ntBASIC0.14□□□□□ -2.39
UBBP0CG47 SNORA20B-201ENST00000384220 132 ntBASIC0.14□□□□□ -2.39
UBBP0CG47 RNU6-793P-201ENST00000384233 104 ntBASIC0.14□□□□□ -2.39
UBBP0CG47 MIR562-201ENST00000384894 95 ntBASIC0.14□□□□□ -2.39
UBBP0CG47 MIR216A-201ENST00000385063 110 ntBASIC0.14□□□□□ -2.39
UBBP0CG47 SNORD105-201ENST00000386910 85 ntBASIC0.14□□□□□ -2.39
UBBP0CG47 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.14□□□□□ -2.39
UBBP0CG47 RPL30P10-201ENST00000488148 337 ntBASIC0.14□□□□□ -2.39
UBBP0CG47 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.14□□□□□ -2.39
UBBP0CG47 AC091885.1-201ENST00000506658 268 ntBASIC0.14□□□□□ -2.39
UBBP0CG47 SNORA19.2-201ENST00000516013 114 ntBASIC0.14□□□□□ -2.39
UBBP0CG47 RNU6-1291P-201ENST00000516591 104 ntBASIC0.14□□□□□ -2.39
UBBP0CG47 AC104383.1-201ENST00000530297 370 ntBASIC0.14□□□□□ -2.39
UBBP0CG47 AC023442.1-201ENST00000531247 422 ntBASIC0.14□□□□□ -2.39
UBBP0CG47 UBL5P4-201ENST00000562584 236 ntBASIC0.14□□□□□ -2.39
UBBP0CG47 PIGPP4-201ENST00000584447 307 ntBASIC0.14□□□□□ -2.39
UBBP0CG47 AC009248.2-201ENST00000619826 254 ntBASIC0.14□□□□□ -2.39
UBBP0CG47 AC027279.3-201ENST00000625055 122 ntBASIC0.14□□□□□ -2.39
UBBP0CG47 Y_RNA.267-201ENST00000364679 109 ntBASIC0.13□□□□□ -2.39
UBBP0CG47 RNU4-9P-201ENST00000364951 139 ntBASIC0.13□□□□□ -2.39
UBBP0CG47 RNU6-1327P-201ENST00000365302 105 ntBASIC0.13□□□□□ -2.39
UBBP0CG47 Y_RNA.381-201ENST00000365666 102 ntBASIC0.13□□□□□ -2.39
UBBP0CG47 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.13□□□□□ -2.39
UBBP0CG47 RNY3P10-201ENST00000384764 102 ntBASIC0.13□□□□□ -2.39
UBBP0CG47 MIR32-201ENST00000384965 70 ntBASIC0.13□□□□□ -2.39
UBBP0CG47 SNORA26.8-201ENST00000391306 124 ntBASIC0.13□□□□□ -2.39
UBBP0CG47 MIR891A-201ENST00000401237 79 ntBASIC0.13□□□□□ -2.39
UBBP0CG47 RNA5SP222-201ENST00000411039 105 ntBASIC0.13□□□□□ -2.39
UBBP0CG47 ZNF885P-201ENST00000420174 1098 ntBASIC0.13□□□□□ -2.39
UBBP0CG47 AC018865.2-201ENST00000423631 129 ntBASIC0.13□□□□□ -2.39
UBBP0CG47 MRPS10P2-201ENST00000431226 381 ntBASIC0.13□□□□□ -2.39
UBBP0CG47 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.13□□□□□ -2.39
UBBP0CG47 Y_RNA.654-201ENST00000497848 106 ntBASIC0.13□□□□□ -2.39
UBBP0CG47 CYCTP-201ENST00000504253 315 ntBASIC0.13□□□□□ -2.39
UBBP0CG47 AC018710.1-201ENST00000506509 158 ntBASIC0.13□□□□□ -2.39
UBBP0CG47 AL358944.1-201ENST00000528537 144 ntBASIC0.13□□□□□ -2.39
UBBP0CG47 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.13□□□□□ -2.39
UBBP0CG47 AC120024.3-201ENST00000603167 156 ntBASIC0.13□□□□□ -2.39
UBBP0CG47 AC100812.1-201ENST00000607622 580 ntBASIC0.13□□□□□ -2.39
UBBP0CG47 AC109347.2-201ENST00000610220 349 ntBASIC0.13□□□□□ -2.39
UBBP0CG47 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.13□□□□□ -2.39
UBBP0CG47 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
UBBP0CG47 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.12□□□□□ -2.39
UBBP0CG47 RNU6-349P-201ENST00000362402 107 ntBASIC0.12□□□□□ -2.39
UBBP0CG47 SNORA27.1-201ENST00000362604 124 ntBASIC0.12□□□□□ -2.39
UBBP0CG47 RNU6-654P-201ENST00000364373 107 ntBASIC0.12□□□□□ -2.39
UBBP0CG47 U8.5-201ENST00000364528 136 ntBASIC0.12□□□□□ -2.39
UBBP0CG47 RNU1-133P-201ENST00000364867 167 ntBASIC0.12□□□□□ -2.39
UBBP0CG47 SNORA36.2-201ENST00000384004 127 ntBASIC0.12□□□□□ -2.39
UBBP0CG47 MIR573-201ENST00000384964 99 ntBASIC0.12□□□□□ -2.39
UBBP0CG47 MIR514A2-201ENST00000385131 88 ntBASIC0.12□□□□□ -2.39
UBBP0CG47 MIR514A3-201ENST00000385132 88 ntBASIC0.12□□□□□ -2.39
UBBP0CG47 MIR153-2-201ENST00000385225 87 ntBASIC0.12□□□□□ -2.39
UBBP0CG47 MT-TH-201ENST00000387441 69 ntBASIC0.12□□□□□ -2.39
UBBP0CG47 CALM2P3-201ENST00000400429 449 ntBASIC0.12□□□□□ -2.39
UBBP0CG47 SNORD111-201ENST00000408139 94 ntBASIC0.12□□□□□ -2.39
UBBP0CG47 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.12□□□□□ -2.39
UBBP0CG47 RNU7-187P-201ENST00000458985 68 ntBASIC0.12□□□□□ -2.39
UBBP0CG47 RNU6-1208P-201ENST00000459588 107 ntBASIC0.12□□□□□ -2.39
UBBP0CG47 SNORA74.3-201ENST00000517108 154 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 357 ms