Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 RNU6-58P-201ENST00000517143 103 ntBASIC0.28□□□□□ -2.36
SCN2BO60939 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.28□□□□□ -2.36
SCN2BO60939 AC011195.1-201ENST00000578177 177 ntBASIC0.28□□□□□ -2.36
SCN2BO60939 CPDP1-201ENST00000579660 283 ntBASIC0.28□□□□□ -2.36
SCN2BO60939 AC131055.1-201ENST00000584626 316 ntBASIC0.28□□□□□ -2.36
SCN2BO60939 MIR4438-201ENST00000585271 93 ntBASIC0.28□□□□□ -2.36
SCN2BO60939 AL357078.3-201ENST00000607528 618 ntBASIC0.28□□□□□ -2.36
SCN2BO60939 AC007684.1-201ENST00000609671 477 ntBASIC0.28□□□□□ -2.36
SCN2BO60939 MIR6515-201ENST00000619843 57 ntBASIC0.28□□□□□ -2.36
SCN2BO60939 RNA5SP264-201ENST00000363115 107 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 Y_RNA.267-201ENST00000364679 109 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 Y_RNA.372-201ENST00000365599 102 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 RNU6-38P-201ENST00000384085 107 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 RNU6-1297P-201ENST00000384415 104 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 RNY3P9-201ENST00000384727 106 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 MIR32-201ENST00000384965 70 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 MIR1185-1-201ENST00000408598 86 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.27□□□□□ -2.37
SCN2BO60939 RPL30P16-201ENST00000419341 429 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 Z98949.2-201ENST00000440996 144 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 AL359672.1-201ENST00000442302 409 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.27□□□□□ -2.37
SCN2BO60939 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.27□□□□□ -2.37
SCN2BO60939 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.27□□□□□ -2.37
SCN2BO60939 RNU7-63P-201ENST00000459054 62 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 RPL30P10-201ENST00000488148 337 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 AC010469.2-201ENST00000496412 480 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 SNORA68.3-201ENST00000515906 83 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 RNU7-41P-201ENST00000515917 61 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 SNORA25.14-201ENST00000516481 132 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 SCARNA1-201ENST00000517138 166 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 MTND4P7-201ENST00000523876 130 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 RPL21P9-201ENST00000556149 474 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.27□□□□□ -2.37
SCN2BO60939 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.27□□□□□ -2.37
SCN2BO60939 AC040904.1-201ENST00000590850 223 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 AC093913.1-201ENST00000614178 329 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 SEPT14P17-201ENST00000617978 177 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 AC006435.5-201ENST00000624486 112 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 MIR6079-201ENST00000635807 62 ntBASIC0.27□□□□□ -2.37
SCN2BO60939 RNU6-1120P-201ENST00000362988 108 ntBASIC0.26□□□□□ -2.37
SCN2BO60939 Y_RNA.151-201ENST00000363566 112 ntBASIC0.26□□□□□ -2.37
SCN2BO60939 Y_RNA.354-201ENST00000365448 111 ntBASIC0.26□□□□□ -2.37
SCN2BO60939 VTRNA1-3-201ENST00000365645 89 ntBASIC0.26□□□□□ -2.37
SCN2BO60939 RNU6-784P-201ENST00000384330 106 ntBASIC0.26□□□□□ -2.37
SCN2BO60939 AL590002.1-201ENST00000406554 418 ntBASIC0.26□□□□□ -2.37
SCN2BO60939 AL606923.1-201ENST00000406616 190 ntBASIC0.26□□□□□ -2.37
SCN2BO60939 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.26□□□□□ -2.37
SCN2BO60939 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.26□□□□□ -2.37
SCN2BO60939 AC244098.3-201ENST00000424803 96 ntBASIC0.26□□□□□ -2.37
SCN2BO60939 MRPS10P2-201ENST00000431226 381 ntBASIC0.26□□□□□ -2.37
SCN2BO60939 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.26□□□□□ -2.37
SCN2BO60939 MRPS10P1-201ENST00000448483 130 ntBASIC0.26□□□□□ -2.37
SCN2BO60939 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.26□□□□□ -2.37
SCN2BO60939 MTCO2P18-201ENST00000457151 658 ntBASIC0.26□□□□□ -2.37
SCN2BO60939 RNU6-189P-201ENST00000516120 101 ntBASIC0.26□□□□□ -2.37
SCN2BO60939 RNU6-1332P-201ENST00000516666 104 ntBASIC0.26□□□□□ -2.37
SCN2BO60939 MTND4LP26-201ENST00000518144 282 ntBASIC0.26□□□□□ -2.37
SCN2BO60939 AP003716.2-201ENST00000528260 108 ntBASIC0.26□□□□□ -2.37
SCN2BO60939 AC023442.1-201ENST00000531247 422 ntBASIC0.26□□□□□ -2.37
SCN2BO60939 AC109810.1-201ENST00000534066 224 ntBASIC0.26□□□□□ -2.37
SCN2BO60939 AC091178.2-201ENST00000584401 117 ntBASIC0.26□□□□□ -2.37
SCN2BO60939 AC007014.2-201ENST00000615581 479 ntBASIC0.26□□□□□ -2.37
SCN2BO60939 AC103705.1-201ENST00000619013 241 ntBASIC0.26□□□□□ -2.37
SCN2BO60939 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
SCN2BO60939 MIR103A2-201ENST00000362154 78 ntBASIC0.25□□□□□ -2.37
SCN2BO60939 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.25□□□□□ -2.37
SCN2BO60939 Y_RNA.409-201ENST00000383990 98 ntBASIC0.25□□□□□ -2.37
SCN2BO60939 RNA5SP95-201ENST00000410319 137 ntBASIC0.25□□□□□ -2.37
SCN2BO60939 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.25□□□□□ -2.37
SCN2BO60939 AL590632.1-201ENST00000424289 371 ntBASIC0.25□□□□□ -2.37
SCN2BO60939 MTCYBP10-201ENST00000424905 650 ntBASIC0.25□□□□□ -2.37
SCN2BO60939 PIGPP3-201ENST00000425307 415 ntBASIC0.25□□□□□ -2.37
SCN2BO60939 AP000870.1-201ENST00000472927 406 ntBASIC0.25□□□□□ -2.37
SCN2BO60939 AC097462.1-201ENST00000514125 324 ntBASIC0.25□□□□□ -2.37
SCN2BO60939 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.25□□□□□ -2.37
SCN2BO60939 MTATP6P24-201ENST00000576835 677 ntBASIC0.25□□□□□ -2.37
SCN2BO60939 MIR4528-201ENST00000577763 90 ntBASIC0.25□□□□□ -2.37
SCN2BO60939 AC017083.3-201ENST00000609955 700 ntBASIC0.25□□□□□ -2.37
SCN2BO60939 AC009248.2-201ENST00000619826 254 ntBASIC0.25□□□□□ -2.37
SCN2BO60939 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
SCN2BO60939 RNU6-1252P-201ENST00000363054 104 ntBASIC0.24□□□□□ -2.37
SCN2BO60939 RNU6-654P-201ENST00000364373 107 ntBASIC0.24□□□□□ -2.37
SCN2BO60939 RNU4-41P-201ENST00000364426 143 ntBASIC0.24□□□□□ -2.37
SCN2BO60939 RNU6-136P-201ENST00000384663 107 ntBASIC0.24□□□□□ -2.37
SCN2BO60939 RNA5SP482-201ENST00000391269 118 ntBASIC0.24□□□□□ -2.37
SCN2BO60939 RNU6-994P-201ENST00000410507 111 ntBASIC0.24□□□□□ -2.37
SCN2BO60939 MTND4P18-201ENST00000447010 465 ntBASIC0.24□□□□□ -2.37
SCN2BO60939 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.24□□□□□ -2.37
SCN2BO60939 MTND3P7-201ENST00000474435 343 ntBASIC0.24□□□□□ -2.37
SCN2BO60939 AC083904.1-201ENST00000487828 231 ntBASIC0.24□□□□□ -2.37
SCN2BO60939 AC018710.1-201ENST00000506509 158 ntBASIC0.24□□□□□ -2.37
SCN2BO60939 RNU6-1198P-201ENST00000516904 67 ntBASIC0.24□□□□□ -2.37
SCN2BO60939 AC104383.1-201ENST00000530297 370 ntBASIC0.24□□□□□ -2.37
SCN2BO60939 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.24□□□□□ -2.37
SCN2BO60939 MIR3908-201ENST00000579798 126 ntBASIC0.24□□□□□ -2.37
SCN2BO60939 AC024933.1-201ENST00000608472 348 ntBASIC0.24□□□□□ -2.37
SCN2BO60939 AC092807.2-201ENST00000609367 243 ntBASIC0.24□□□□□ -2.37
SCN2BO60939 MIR8076-201ENST00000611401 83 ntBASIC0.24□□□□□ -2.37
SCN2BO60939 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 281.9 ms