Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SMAD6O43541 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
SMAD6O43541 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SMAD6O43541 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.37□□□□□ -2.03
SMAD6O43541 Y_RNA.40-201ENST00000362645 93 ntBASIC2.37□□□□□ -2.03
SMAD6O43541 RNU6-529P-201ENST00000363383 104 ntBASIC2.37□□□□□ -2.03
SMAD6O43541 Y_RNA.308-201ENST00000365043 101 ntBASIC2.37□□□□□ -2.03
SMAD6O43541 RNU6-245P-201ENST00000384020 107 ntBASIC2.37□□□□□ -2.03
SMAD6O43541 CBX3P9-201ENST00000402326 552 ntBASIC2.37□□□□□ -2.03
SMAD6O43541 CYCSP48-201ENST00000417124 323 ntBASIC2.37□□□□□ -2.03
SMAD6O43541 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.37□□□□□ -2.03
SMAD6O43541 AL121594.1-201ENST00000475906 575 ntBASIC2.37□□□□□ -2.03
SMAD6O43541 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.37□□□□□ -2.03
SMAD6O43541 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.37□□□□□ -2.03
SMAD6O43541 RNU6-191P-201ENST00000516295 94 ntBASIC2.37□□□□□ -2.03
SMAD6O43541 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SMAD6O43541 AC105137.2-201ENST00000569073 466 ntBASIC2.37□□□□□ -2.03
SMAD6O43541 MIR4308-201ENST00000580634 81 ntBASIC2.37□□□□□ -2.03
SMAD6O43541 AC005520.5-201ENST00000613926 164 ntBASIC2.37□□□□□ -2.03
SMAD6O43541 U6.106-201ENST00000636360 105 ntBASIC2.37□□□□□ -2.03
SMAD6O43541 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.37□□□□□ -2.03
SMAD6O43541 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
SMAD6O43541 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SMAD6O43541 SNORA3A-201ENST00000364113 130 ntBASIC2.36□□□□□ -2.03
SMAD6O43541 Y_RNA.240-201ENST00000364469 95 ntBASIC2.36□□□□□ -2.03
SMAD6O43541 RNU1-51P-201ENST00000365345 176 ntBASIC2.36□□□□□ -2.03
SMAD6O43541 RNU6-748P-201ENST00000384648 107 ntBASIC2.36□□□□□ -2.03
SMAD6O43541 Z98742.3-201ENST00000418637 326 ntBASIC2.36□□□□□ -2.03
SMAD6O43541 AC024067.1-201ENST00000426199 223 ntBASIC2.36□□□□□ -2.03
SMAD6O43541 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.36□□□□□ -2.03
SMAD6O43541 RPS15AP28-201ENST00000435088 386 ntBASIC2.36□□□□□ -2.03
SMAD6O43541 AC018634.1-201ENST00000437554 401 ntBASIC2.36□□□□□ -2.03
SMAD6O43541 AC091021.1-201ENST00000468051 388 ntBASIC2.36□□□□□ -2.03
SMAD6O43541 TRBV12-1-201ENST00000479785 344 ntBASIC2.36□□□□□ -2.03
SMAD6O43541 RNU6-1219P-201ENST00000516143 112 ntBASIC2.36□□□□□ -2.03
SMAD6O43541 RNU6-155P-201ENST00000516347 100 ntBASIC2.36□□□□□ -2.03
SMAD6O43541 RNA5SP24-201ENST00000516478 95 ntBASIC2.36□□□□□ -2.03
SMAD6O43541 SNORD19.2-201ENST00000516978 73 ntBASIC2.36□□□□□ -2.03
SMAD6O43541 MIR3923-201ENST00000579521 83 ntBASIC2.36□□□□□ -2.03
SMAD6O43541 MIR3199-1-201ENST00000582434 88 ntBASIC2.36□□□□□ -2.03
SMAD6O43541 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.36□□□□□ -2.03
SMAD6O43541 DEFB117-201ENST00000602356 141 ntBASIC2.36□□□□□ -2.03
SMAD6O43541 AL034555.1-201ENST00000604816 211 ntBASIC2.36□□□□□ -2.03
SMAD6O43541 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.36□□□□□ -2.03
SMAD6O43541 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.36□□□□□ -2.03
SMAD6O43541 AC012640.5-201ENST00000623897 319 ntBASIC2.36□□□□□ -2.03
SMAD6O43541 snoU18.1-201ENST00000629629 71 ntBASIC2.36□□□□□ -2.03
SMAD6O43541 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.35□□□□□ -2.03
SMAD6O43541 RNU1-62P-201ENST00000362599 164 ntBASIC2.35□□□□□ -2.03
SMAD6O43541 RNU4-56P-201ENST00000364700 142 ntBASIC2.35□□□□□ -2.03
SMAD6O43541 RNU6-804P-201ENST00000384286 107 ntBASIC2.35□□□□□ -2.03
SMAD6O43541 RNA5SP181-201ENST00000410246 98 ntBASIC2.35□□□□□ -2.03
SMAD6O43541 RNU2-54P-201ENST00000410299 190 ntBASIC2.35□□□□□ -2.03
SMAD6O43541 RNU6-1328P-201ENST00000410938 106 ntBASIC2.35□□□□□ -2.03
SMAD6O43541 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.35□□□□□ -2.03
SMAD6O43541 OOSP1P1-201ENST00000423265 274 ntBASIC2.35□□□□□ -2.03
SMAD6O43541 EIF4EP4-201ENST00000424916 578 ntBASIC2.35□□□□□ -2.03
SMAD6O43541 RNU6-346P-201ENST00000516288 111 ntBASIC2.35□□□□□ -2.03
SMAD6O43541 SNORA31.11-201ENST00000516528 139 ntBASIC2.35□□□□□ -2.03
SMAD6O43541 RNA5SP402-201ENST00000517148 110 ntBASIC2.35□□□□□ -2.03
SMAD6O43541 MTND5P41-201ENST00000517498 206 ntBASIC2.35□□□□□ -2.03
SMAD6O43541 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.35□□□□□ -2.03
SMAD6O43541 MRPS18CP4-201ENST00000535821 231 ntBASIC2.35□□□□□ -2.03
SMAD6O43541 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.35□□□□□ -2.03
SMAD6O43541 AC104465.1-201ENST00000611365 139 ntBASIC2.35□□□□□ -2.03
SMAD6O43541 MIR3674-201ENST00000636576 68 ntBASIC2.35□□□□□ -2.03
SMAD6O43541 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SMAD6O43541 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.34□□□□□ -2.03
SMAD6O43541 Y_RNA.262-201ENST00000364641 102 ntBASIC2.34□□□□□ -2.03
SMAD6O43541 Y_RNA.304-201ENST00000365011 112 ntBASIC2.34□□□□□ -2.03
SMAD6O43541 Y_RNA.415-201ENST00000384012 112 ntBASIC2.34□□□□□ -2.03
SMAD6O43541 RNU6-211P-201ENST00000384047 107 ntBASIC2.34□□□□□ -2.03
SMAD6O43541 AC004866.1-201ENST00000411748 78 ntBASIC2.34□□□□□ -2.03
SMAD6O43541 AL606753.1-201ENST00000427435 87 ntBASIC2.34□□□□□ -2.03
SMAD6O43541 RNU7-200P-201ENST00000516105 62 ntBASIC2.34□□□□□ -2.03
SMAD6O43541 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.34□□□□□ -2.03
SMAD6O43541 MIR3945-201ENST00000581853 98 ntBASIC2.34□□□□□ -2.03
SMAD6O43541 MIR5007-201ENST00000583098 95 ntBASIC2.34□□□□□ -2.03
SMAD6O43541 MIR4298-201ENST00000584380 73 ntBASIC2.34□□□□□ -2.03
SMAD6O43541 SNRPGP20-201ENST00000604477 205 ntBASIC2.34□□□□□ -2.03
SMAD6O43541 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.34□□□□□ -2.03
SMAD6O43541 AL365265.1-201ENST00000621045 234 ntBASIC2.34□□□□□ -2.03
SMAD6O43541 AC132825.6-201ENST00000638861 357 ntBASIC2.34□□□□□ -2.03
SMAD6O43541 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SMAD6O43541 AC010889.1-201ENST00000566193 2666 ntBASIC2.34□□□□□ -2.04
SMAD6O43541 ZNF658B-202ENST00000615961 3375 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
SMAD6O43541 Y_RNA.8-201ENST00000362353 102 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 RNU4-15P-201ENST00000362613 141 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 RNU6-1010P-201ENST00000362757 107 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 RNU6-1272P-201ENST00000362776 107 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 RNU6-653P-201ENST00000363074 106 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 Y_RNA.435-201ENST00000384095 112 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 RNU6-1310P-201ENST00000384153 107 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 MIR147B-201ENST00000390185 80 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 AL355497.1-201ENST00000406262 551 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 SNORD23.1-201ENST00000408212 104 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 MIR320B2-201ENST00000408479 138 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 RNA5SP201-201ENST00000410316 124 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms