Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 RNA5SP490-201ENST00000517141 136 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 NDUFA5P6-201ENST00000542110 379 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 RRN3P3-201ENST00000549207 578 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.54□□□□□ -2.16
HDAC3O15379 MIR4255-201ENST00000579351 72 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 AC136443.5-201ENST00000603741 370 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 AC025754.2-201ENST00000606491 432 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 AC103810.8-201ENST00000607347 118 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.54□□□□□ -2.16
HDAC3O15379 MIR6845-201ENST00000613182 61 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 AL161722.3-201ENST00000605789 2983 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 Y_RNA.27-201ENST00000362540 103 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 Y_RNA.105-201ENST00000363182 111 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 Y_RNA.145-201ENST00000363527 102 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 RNU6-137P-201ENST00000363680 108 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 RNU6-806P-201ENST00000365147 105 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 AC117470.1-201ENST00000381974 330 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 RNU6-245P-201ENST00000384020 107 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 Y_RNA.424-201ENST00000384063 103 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 Y_RNA.458-201ENST00000384240 102 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 Y_RNA.459-201ENST00000384251 102 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 Y_RNA.512-201ENST00000384518 102 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 MIR504-201ENST00000385065 83 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 MIR320A-201ENST00000385302 82 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 snosnR66.1-201ENST00000391095 99 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 MIR548F4-201ENST00000408515 105 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 BX510359.4-201ENST00000423750 193 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.53□□□□□ -2.16
HDAC3O15379 RPEP5-201ENST00000441137 268 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 AC016925.1-201ENST00000458303 298 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
HDAC3O15379 HMGN2P9-201ENST00000476875 229 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 RPL23AP63-201ENST00000498752 471 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 RNU6-1045P-201ENST00000516321 107 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 RNU6-1012P-201ENST00000516606 109 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 RNU6-295P-201ENST00000516901 104 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 RNU1-117P-201ENST00000517041 158 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 AC023442.1-201ENST00000531247 422 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
HDAC3O15379 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.53□□□□□ -2.16
HDAC3O15379 AC008873.1-201ENST00000625051 138 ntBASIC1.53□□□□□ -2.16
HDAC3O15379 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.53□□□□□ -2.16
HDAC3O15379 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HDAC3O15379 RNU6-961P-201ENST00000363893 105 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 Y_RNA.210-201ENST00000364161 110 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 Y_RNA.471-201ENST00000384312 102 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 RNU6-1105P-201ENST00000384774 107 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 MIR1252-201ENST00000408861 65 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 RNU6-101P-201ENST00000410323 104 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 SNORD12B-201ENST00000410433 91 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.52□□□□□ -2.17
HDAC3O15379 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.52□□□□□ -2.17
HDAC3O15379 MTCO3P19-201ENST00000415864 321 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.52□□□□□ -2.17
HDAC3O15379 ELOCP20-201ENST00000422460 345 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 AL358176.2-201ENST00000425769 204 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.52□□□□□ -2.17
HDAC3O15379 MTND5P22-201ENST00000458380 195 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 RPL26P26-201ENST00000480251 434 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 RPS23P5-201ENST00000495419 428 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 RN7SKP49-201ENST00000516675 260 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 AC131281.1-201ENST00000522984 164 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 AC022616.4-201ENST00000522985 181 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 AP002001.1-203ENST00000534002 267 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.52□□□□□ -2.17
HDAC3O15379 AC055872.1-201ENST00000570978 278 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 MIR4659A-201ENST00000580269 81 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 SNRPGP20-201ENST00000604477 205 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 AC010999.1-201ENST00000611856 324 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 AC240442.1-201ENST00000616055 283 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 AL138825.1-201ENST00000618587 192 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 MIR7843-201ENST00000622274 79 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HDAC3O15379 AP000648.3-201ENST00000623539 4507 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HDAC3O15379 MTND5P35-201ENST00000557537 1720 ntBASIC1.52□□□□□ -2.17
HDAC3O15379 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.51□□□□□ -2.17
HDAC3O15379 RNU6-1309P-201ENST00000363305 108 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 Y_RNA.133-201ENST00000363428 110 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 Y_RNA.179-201ENST00000363844 90 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 SNORD31B-201ENST00000364977 69 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 Y_RNA.332-201ENST00000365271 113 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 RNU6-793P-201ENST00000384233 104 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 MIR568-201ENST00000385036 95 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 MIR30A-201ENST00000385092 71 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 MIR764-201ENST00000390811 85 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 RNA5SP465-201ENST00000391195 109 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 MIR1283-1-201ENST00000408494 87 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 RNU6-121P-201ENST00000410525 99 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 ELOCP21-201ENST00000412558 336 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.51□□□□□ -2.17
HDAC3O15379 RPS29P23-201ENST00000458635 123 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 AC010531.2-201ENST00000465012 153 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 AC023790.1-201ENST00000482174 347 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 AC093852.1-201ENST00000503587 266 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 MRPS35P2-201ENST00000508242 191 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 AC067942.3-201ENST00000512025 362 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 SNORA40.9-201ENST00000515895 93 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 RNU6-344P-201ENST00000516635 111 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 215.2 ms