Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 AL136360.1-201ENST00000503377 1900 ntBASIC3.85□□□□□ -1.79
PCDHB9Q9Y5E1 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHB9Q9Y5E1 MAPK10-322ENST00000641485 4530 ntBASIC3.84□□□□□ -1.79
PCDHB9Q9Y5E1 AL138878.1-201ENST00000405131 347 ntBASIC3.84□□□□□ -1.79
PCDHB9Q9Y5E1 Y_RNA.649-201ENST00000459077 103 ntBASIC3.84□□□□□ -1.79
PCDHB9Q9Y5E1 AL133162.1-201ENST00000463228 453 ntBASIC3.84□□□□□ -1.79
PCDHB9Q9Y5E1 AC106707.2-201ENST00000484182 374 ntBASIC3.84□□□□□ -1.79
PCDHB9Q9Y5E1 RNU6-856P-201ENST00000516959 98 ntBASIC3.84□□□□□ -1.79
PCDHB9Q9Y5E1 RNU6-1096P-201ENST00000517089 102 ntBASIC3.84□□□□□ -1.79
PCDHB9Q9Y5E1 AC087499.8-201ENST00000578406 226 ntBASIC3.84□□□□□ -1.79
PCDHB9Q9Y5E1 AC025166.1-201ENST00000612411 163 ntBASIC3.84□□□□□ -1.79
PCDHB9Q9Y5E1 MIR7157-201ENST00000635801 60 ntBASIC3.84□□□□□ -1.79
PCDHB9Q9Y5E1 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
PCDHB9Q9Y5E1 MAPK10-253ENST00000641010 4072 ntBASIC3.84□□□□□ -1.79
PCDHB9Q9Y5E1 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.84□□□□□ -1.79
PCDHB9Q9Y5E1 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PCDHB9Q9Y5E1 AC080128.1-201ENST00000474389 1917 ntBASIC3.83□□□□□ -1.8
PCDHB9Q9Y5E1 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHB9Q9Y5E1 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
PCDHB9Q9Y5E1 MIR520G-201ENST00000385064 90 ntBASIC3.83□□□□□ -1.8
PCDHB9Q9Y5E1 RNU2-32P-201ENST00000411193 191 ntBASIC3.83□□□□□ -1.8
PCDHB9Q9Y5E1 AL513477.1-202ENST00000417061 214 ntBASIC3.83□□□□□ -1.8
PCDHB9Q9Y5E1 MTATP6P21-201ENST00000440681 189 ntBASIC3.83□□□□□ -1.8
PCDHB9Q9Y5E1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHB9Q9Y5E1 SNORA59A-201ENST00000459326 152 ntBASIC3.83□□□□□ -1.8
PCDHB9Q9Y5E1 PHBP14-201ENST00000512887 367 ntBASIC3.83□□□□□ -1.8
PCDHB9Q9Y5E1 U2.20-201ENST00000613956 192 ntBASIC3.83□□□□□ -1.8
PCDHB9Q9Y5E1 U6.105-201ENST00000637379 88 ntBASIC3.83□□□□□ -1.8
PCDHB9Q9Y5E1 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHB9Q9Y5E1 AC093010.3-201ENST00000570269 15214 ntBASIC3.83□□□□□ -1.8
PCDHB9Q9Y5E1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHB9Q9Y5E1 AC008555.8-201ENST00000623602 2168 ntBASIC3.83□□□□□ -1.8
PCDHB9Q9Y5E1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHB9Q9Y5E1 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHB9Q9Y5E1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PCDHB9Q9Y5E1 AF228730.3-201ENST00000436691 102 ntBASIC3.82□□□□□ -1.8
PCDHB9Q9Y5E1 AC018634.1-201ENST00000437554 401 ntBASIC3.82□□□□□ -1.8
PCDHB9Q9Y5E1 RN7SL807P-201ENST00000470923 297 ntBASIC3.82□□□□□ -1.8
PCDHB9Q9Y5E1 NDUFA4P2-201ENST00000489989 244 ntBASIC3.82□□□□□ -1.8
PCDHB9Q9Y5E1 RNA5SP208-201ENST00000516156 78 ntBASIC3.82□□□□□ -1.8
PCDHB9Q9Y5E1 SCARNA3-201ENST00000517097 143 ntBASIC3.82□□□□□ -1.8
PCDHB9Q9Y5E1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHB9Q9Y5E1 AL137849.1-201ENST00000604767 169 ntBASIC3.82□□□□□ -1.8
PCDHB9Q9Y5E1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.82□□□□□ -1.8
PCDHB9Q9Y5E1 MIR7975-201ENST00000619350 68 ntBASIC3.82□□□□□ -1.8
PCDHB9Q9Y5E1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHB9Q9Y5E1 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHB9Q9Y5E1 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
PCDHB9Q9Y5E1 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDHB9Q9Y5E1 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHB9Q9Y5E1 RNVU1-14-201ENST00000384770 164 ntBASIC3.81□□□□□ -1.8
PCDHB9Q9Y5E1 MIR1253-201ENST00000408273 105 ntBASIC3.81□□□□□ -1.8
PCDHB9Q9Y5E1 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHB9Q9Y5E1 AC123900.1-201ENST00000420390 96 ntBASIC3.81□□□□□ -1.8
PCDHB9Q9Y5E1 AC093259.1-201ENST00000509755 300 ntBASIC3.81□□□□□ -1.8
PCDHB9Q9Y5E1 SNORA4.4-201ENST00000515921 135 ntBASIC3.81□□□□□ -1.8
PCDHB9Q9Y5E1 SNORA72.7-201ENST00000516349 94 ntBASIC3.81□□□□□ -1.8
PCDHB9Q9Y5E1 RNU6-504P-201ENST00000516568 104 ntBASIC3.81□□□□□ -1.8
PCDHB9Q9Y5E1 SNORD59.2-201ENST00000516873 68 ntBASIC3.81□□□□□ -1.8
PCDHB9Q9Y5E1 SNORA62.6-201ENST00000606322 83 ntBASIC3.81□□□□□ -1.8
PCDHB9Q9Y5E1 MTND5P18-201ENST00000445624 1801 ntBASIC3.81□□□□□ -1.8
PCDHB9Q9Y5E1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHB9Q9Y5E1 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHB9Q9Y5E1 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHB9Q9Y5E1 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PCDHB9Q9Y5E1 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHB9Q9Y5E1 Y_RNA.332-201ENST00000365271 113 ntBASIC3.8□□□□□ -1.8
PCDHB9Q9Y5E1 MIR218-1-201ENST00000384999 110 ntBASIC3.8□□□□□ -1.8
PCDHB9Q9Y5E1 MIR548A1-201ENST00000385041 97 ntBASIC3.8□□□□□ -1.8
PCDHB9Q9Y5E1 AL021397.1-201ENST00000451806 248 ntBASIC3.8□□□□□ -1.8
PCDHB9Q9Y5E1 TRBV12-2-201ENST00000489763 344 ntBASIC3.8□□□□□ -1.8
PCDHB9Q9Y5E1 RNA5SP236-201ENST00000516169 116 ntBASIC3.8□□□□□ -1.8
PCDHB9Q9Y5E1 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.8□□□□□ -1.8
PCDHB9Q9Y5E1 AC244505.7-201ENST00000599675 272 ntBASIC3.8□□□□□ -1.8
PCDHB9Q9Y5E1 SCARNA15.3-201ENST00000626315 122 ntBASIC3.8□□□□□ -1.8
PCDHB9Q9Y5E1 SCARNA4.1-201ENST00000628597 123 ntBASIC3.8□□□□□ -1.8
PCDHB9Q9Y5E1 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHB9Q9Y5E1 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDHB9Q9Y5E1 FAM35DP-201ENST00000323387 2712 ntBASIC3.8□□□□□ -1.8
PCDHB9Q9Y5E1 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.8□□□□□ -1.8
PCDHB9Q9Y5E1 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHB9Q9Y5E1 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHB9Q9Y5E1 CEP170P1-201ENST00000502249 4587 ntBASIC3.8□□□□□ -1.8
PCDHB9Q9Y5E1 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PCDHB9Q9Y5E1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHB9Q9Y5E1 RNU1-96P-201ENST00000364163 162 ntBASIC3.79□□□□□ -1.8
PCDHB9Q9Y5E1 RNU6-1292P-201ENST00000383856 107 ntBASIC3.79□□□□□ -1.8
PCDHB9Q9Y5E1 SNORA1-201ENST00000384107 130 ntBASIC3.79□□□□□ -1.8
PCDHB9Q9Y5E1 MIR95-201ENST00000385072 81 ntBASIC3.79□□□□□ -1.8
PCDHB9Q9Y5E1 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PCDHB9Q9Y5E1 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PCDHB9Q9Y5E1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHB9Q9Y5E1 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHB9Q9Y5E1 MRPS17P9-201ENST00000511924 393 ntBASIC3.79□□□□□ -1.8
PCDHB9Q9Y5E1 MIR2114-201ENST00000516645 80 ntBASIC3.79□□□□□ -1.8
PCDHB9Q9Y5E1 Y_RNA.694-201ENST00000516677 117 ntBASIC3.79□□□□□ -1.8
PCDHB9Q9Y5E1 IGKV1-22-201ENST00000524313 326 ntBASIC3.79□□□□□ -1.8
PCDHB9Q9Y5E1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
PCDHB9Q9Y5E1 AL360157.1-201ENST00000565962 87 ntBASIC3.79□□□□□ -1.8
PCDHB9Q9Y5E1 MIR3129-201ENST00000581095 76 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 193.1 ms