Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 Y_RNA.310-201ENST00000365063 113 ntBASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 Y_RNA.341-201ENST00000365341 102 ntBASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 RNU4-17P-201ENST00000365598 141 ntBASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 RNU6-546P-201ENST00000383991 107 ntBASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 RNU6-1235P-201ENST00000384559 107 ntBASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 MIR128-1-201ENST00000384921 82 ntBASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 MIR181B1-201ENST00000385240 110 ntBASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 RNU6-855P-201ENST00000410395 104 ntBASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 AL135790.2-201ENST00000437701 267 ntBASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 MTND2P29-201ENST00000438595 412 ntBASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 AL161788.1-201ENST00000441805 169 ntBASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 RNU6-498P-201ENST00000459468 107 ntBASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 RNU6-948P-201ENST00000516374 107 ntBASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 AC022616.8-201ENST00000533569 253 ntBASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 MIR5688-201ENST00000580619 83 ntBASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 AC090616.3-201ENST00000582184 217 ntBASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 AC006435.5-201ENST00000624486 112 ntBASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PPARGC1AQ9UBK2 RNU1-109P-201ENST00000383960 147 ntBASIC3□□□□□ -1.93
PPARGC1AQ9UBK2 MIR218-1-201ENST00000384999 110 ntBASIC3□□□□□ -1.93
PPARGC1AQ9UBK2 AC022018.1-201ENST00000430685 241 ntBASIC3□□□□□ -1.93
PPARGC1AQ9UBK2 AL139132.1-201ENST00000431587 344 ntBASIC3□□□□□ -1.93
PPARGC1AQ9UBK2 ATP5EP1-201ENST00000510257 156 ntBASIC3□□□□□ -1.93
PPARGC1AQ9UBK2 MIR449C-201ENST00000516047 92 ntBASIC3□□□□□ -1.93
PPARGC1AQ9UBK2 RNY3P16-201ENST00000516338 101 ntBASIC3□□□□□ -1.93
PPARGC1AQ9UBK2 AC022559.1-201ENST00000520905 205 ntBASIC3□□□□□ -1.93
PPARGC1AQ9UBK2 AC100767.1-201ENST00000528178 123 ntBASIC3□□□□□ -1.93
PPARGC1AQ9UBK2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PPARGC1AQ9UBK2 AC025754.2-201ENST00000606491 432 ntBASIC3□□□□□ -1.93
PPARGC1AQ9UBK2 AC091953.5-201ENST00000622919 233 ntBASIC3□□□□□ -1.93
PPARGC1AQ9UBK2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3□□□□□ -1.93
PPARGC1AQ9UBK2 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3□□□□□ -1.93
PPARGC1AQ9UBK2 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.99□□□□□ -1.93
PPARGC1AQ9UBK2 AL161431.1-201ENST00000618966 4205 ntBASIC2.99□□□□□ -1.93
PPARGC1AQ9UBK2 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.99□□□□□ -1.93
PPARGC1AQ9UBK2 Y_RNA.7-201ENST00000362352 102 ntBASIC2.99□□□□□ -1.93
PPARGC1AQ9UBK2 SNORA26.5-201ENST00000391215 123 ntBASIC2.99□□□□□ -1.93
PPARGC1AQ9UBK2 RNU6-493P-201ENST00000391321 108 ntBASIC2.99□□□□□ -1.93
PPARGC1AQ9UBK2 EEF1A1P41-201ENST00000414667 207 ntBASIC2.99□□□□□ -1.93
PPARGC1AQ9UBK2 AC008134.1-201ENST00000420943 193 ntBASIC2.99□□□□□ -1.93
PPARGC1AQ9UBK2 AC010154.1-201ENST00000425857 269 ntBASIC2.99□□□□□ -1.93
PPARGC1AQ9UBK2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
PPARGC1AQ9UBK2 RPL23AP7-203ENST00000449021 469 ntBASIC2.99□□□□□ -1.93
PPARGC1AQ9UBK2 AC023141.11-201ENST00000508864 202 ntBASIC2.99□□□□□ -1.93
PPARGC1AQ9UBK2 AC010598.1-201ENST00000510378 103 ntBASIC2.99□□□□□ -1.93
PPARGC1AQ9UBK2 SCGB1D5P-201ENST00000515134 247 ntBASIC2.99□□□□□ -1.93
PPARGC1AQ9UBK2 Y_RNA.703-201ENST00000516846 111 ntBASIC2.99□□□□□ -1.93
PPARGC1AQ9UBK2 SUMO2P18-201ENST00000518873 252 ntBASIC2.99□□□□□ -1.93
PPARGC1AQ9UBK2 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.99□□□□□ -1.93
PPARGC1AQ9UBK2 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.99□□□□□ -1.93
PPARGC1AQ9UBK2 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PPARGC1AQ9UBK2 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PPARGC1AQ9UBK2 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.99□□□□□ -1.93
PPARGC1AQ9UBK2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.98□□□□□ -1.93
PPARGC1AQ9UBK2 RNU6-438P-201ENST00000365561 103 ntBASIC2.98□□□□□ -1.93
PPARGC1AQ9UBK2 Y_RNA.571-201ENST00000384753 98 ntBASIC2.98□□□□□ -1.93
PPARGC1AQ9UBK2 RNU2-63P-201ENST00000410792 194 ntBASIC2.98□□□□□ -1.93
PPARGC1AQ9UBK2 AL451074.5-201ENST00000415894 435 ntBASIC2.98□□□□□ -1.93
PPARGC1AQ9UBK2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.98□□□□□ -1.93
PPARGC1AQ9UBK2 EEF1B2P7-201ENST00000451177 676 ntBASIC2.98□□□□□ -1.93
PPARGC1AQ9UBK2 RPL36AP21-201ENST00000490372 323 ntBASIC2.98□□□□□ -1.93
PPARGC1AQ9UBK2 HMGB3P3-201ENST00000510526 400 ntBASIC2.98□□□□□ -1.93
PPARGC1AQ9UBK2 SCARNA13-201ENST00000516672 275 ntBASIC2.98□□□□□ -1.93
PPARGC1AQ9UBK2 RNU6-789P-201ENST00000517105 102 ntBASIC2.98□□□□□ -1.93
PPARGC1AQ9UBK2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.98□□□□□ -1.93
PPARGC1AQ9UBK2 MRPS18CP4-201ENST00000535821 231 ntBASIC2.98□□□□□ -1.93
PPARGC1AQ9UBK2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.98□□□□□ -1.93
PPARGC1AQ9UBK2 AC108706.1-201ENST00000611053 297 ntBASIC2.98□□□□□ -1.93
PPARGC1AQ9UBK2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.98□□□□□ -1.93
PPARGC1AQ9UBK2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.98□□□□□ -1.93
PPARGC1AQ9UBK2 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
PPARGC1AQ9UBK2 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.97□□□□□ -1.93
PPARGC1AQ9UBK2 SNORA38-201ENST00000363946 132 ntBASIC2.97□□□□□ -1.93
PPARGC1AQ9UBK2 RNY1P5-201ENST00000383890 115 ntBASIC2.97□□□□□ -1.93
PPARGC1AQ9UBK2 SNORD88.1-201ENST00000408684 91 ntBASIC2.97□□□□□ -1.93
PPARGC1AQ9UBK2 RNU2-32P-201ENST00000411193 191 ntBASIC2.97□□□□□ -1.93
PPARGC1AQ9UBK2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.97□□□□□ -1.93
PPARGC1AQ9UBK2 AC104389.3-201ENST00000445629 235 ntBASIC2.97□□□□□ -1.93
PPARGC1AQ9UBK2 U8.19-201ENST00000459095 133 ntBASIC2.97□□□□□ -1.93
PPARGC1AQ9UBK2 CKS1BP2-201ENST00000497342 240 ntBASIC2.97□□□□□ -1.93
PPARGC1AQ9UBK2 AC074198.2-201ENST00000508153 258 ntBASIC2.97□□□□□ -1.93
PPARGC1AQ9UBK2 RNU6-406P-201ENST00000516470 107 ntBASIC2.97□□□□□ -1.93
PPARGC1AQ9UBK2 RNU6-255P-201ENST00000516957 105 ntBASIC2.97□□□□□ -1.93
PPARGC1AQ9UBK2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.97□□□□□ -1.93
PPARGC1AQ9UBK2 AC023043.3-201ENST00000593113 385 ntBASIC2.97□□□□□ -1.93
PPARGC1AQ9UBK2 AC090115.4-201ENST00000609970 188 ntBASIC2.97□□□□□ -1.93
PPARGC1AQ9UBK2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
PPARGC1AQ9UBK2 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.97□□□□□ -1.93
PPARGC1AQ9UBK2 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.97□□□□□ -1.93
PPARGC1AQ9UBK2 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.96□□□□□ -1.93
PPARGC1AQ9UBK2 SNORA27.1-201ENST00000362604 124 ntBASIC2.96□□□□□ -1.94
PPARGC1AQ9UBK2 RNU1-35P-201ENST00000362782 153 ntBASIC2.96□□□□□ -1.94
PPARGC1AQ9UBK2 Y_RNA.75-201ENST00000362927 97 ntBASIC2.96□□□□□ -1.94
PPARGC1AQ9UBK2 RNU6-312P-201ENST00000364629 107 ntBASIC2.96□□□□□ -1.94
PPARGC1AQ9UBK2 RNU6-144P-201ENST00000383951 107 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 212.2 ms