Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNU6-593P-201ENST00000364716 112 ntBASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 SNORA4.2-201ENST00000365313 147 ntBASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 RNU6-331P-201ENST00000384724 107 ntBASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 USP9YP16-201ENST00000430287 407 ntBASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 MTND3P23-201ENST00000431980 347 ntBASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 USP9YP23-201ENST00000455085 407 ntBASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 RNU6-1114P-201ENST00000516022 107 ntBASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 RNU6-902P-201ENST00000517212 91 ntBASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 AK6P2-201ENST00000549020 471 ntBASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 AL121579.1-201ENST00000555129 305 ntBASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 AC068338.1-201ENST00000565567 176 ntBASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 MIR5695-201ENST00000579717 85 ntBASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 MIR4742-201ENST00000581069 85 ntBASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 AC022432.1-201ENST00000595739 310 ntBASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 AC068790.6-201ENST00000602558 258 ntBASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 AC018462.2-201ENST00000605375 395 ntBASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 AL355802.3-201ENST00000607571 545 ntBASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 MIR6078-201ENST00000611069 100 ntBASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 MIR8070-201ENST00000616510 88 ntBASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 AC027514.1-201ENST00000588561 1603 ntBASIC1.12□□□□□ -2.23
CLCF1Q9UBD9 Y_RNA.184-201ENST00000363884 108 ntBASIC1.12□□□□□ -2.23
CLCF1Q9UBD9 RNU6-53P-201ENST00000365367 106 ntBASIC1.12□□□□□ -2.23
CLCF1Q9UBD9 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CLCF1Q9UBD9 MIR194-1-201ENST00000384892 85 ntBASIC1.12□□□□□ -2.23
CLCF1Q9UBD9 RNU1-139P-201ENST00000391307 165 ntBASIC1.12□□□□□ -2.23
CLCF1Q9UBD9 MTND3P8-201ENST00000412909 339 ntBASIC1.12□□□□□ -2.23
CLCF1Q9UBD9 AC074085.1-201ENST00000413598 418 ntBASIC1.12□□□□□ -2.23
CLCF1Q9UBD9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.12□□□□□ -2.23
CLCF1Q9UBD9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.12□□□□□ -2.23
CLCF1Q9UBD9 RNU7-34P-201ENST00000459394 64 ntBASIC1.12□□□□□ -2.23
CLCF1Q9UBD9 RPS26P45-201ENST00000471748 340 ntBASIC1.12□□□□□ -2.23
CLCF1Q9UBD9 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.12□□□□□ -2.23
CLCF1Q9UBD9 Y_RNA.683-201ENST00000516508 93 ntBASIC1.12□□□□□ -2.23
CLCF1Q9UBD9 RNU6-1016P-201ENST00000516689 94 ntBASIC1.12□□□□□ -2.23
CLCF1Q9UBD9 CBX3P8-201ENST00000532412 525 ntBASIC1.12□□□□□ -2.23
CLCF1Q9UBD9 APOOP3-201ENST00000536787 586 ntBASIC1.12□□□□□ -2.23
CLCF1Q9UBD9 AC015688.6-201ENST00000577737 104 ntBASIC1.12□□□□□ -2.23
CLCF1Q9UBD9 AC073413.2-201ENST00000604332 360 ntBASIC1.12□□□□□ -2.23
CLCF1Q9UBD9 MZT1P2-201ENST00000604387 248 ntBASIC1.12□□□□□ -2.23
CLCF1Q9UBD9 AP001485.1-201ENST00000604799 199 ntBASIC1.12□□□□□ -2.23
CLCF1Q9UBD9 AL121890.5-201ENST00000620848 304 ntBASIC1.12□□□□□ -2.23
CLCF1Q9UBD9 Y_RNA.48-201ENST00000362710 103 ntBASIC1.11□□□□□ -2.23
CLCF1Q9UBD9 RNU6-281P-201ENST00000384212 103 ntBASIC1.11□□□□□ -2.23
CLCF1Q9UBD9 RNA5SP109-201ENST00000391010 116 ntBASIC1.11□□□□□ -2.23
CLCF1Q9UBD9 RPL21P1-201ENST00000399532 476 ntBASIC1.11□□□□□ -2.23
CLCF1Q9UBD9 MIR548K-201ENST00000408406 116 ntBASIC1.11□□□□□ -2.23
CLCF1Q9UBD9 SDAD1P3-201ENST00000427380 333 ntBASIC1.11□□□□□ -2.23
CLCF1Q9UBD9 AC027119.1-201ENST00000440877 241 ntBASIC1.11□□□□□ -2.23
CLCF1Q9UBD9 MTND4P18-201ENST00000447010 465 ntBASIC1.11□□□□□ -2.23
CLCF1Q9UBD9 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.11□□□□□ -2.23
CLCF1Q9UBD9 RPS29P23-201ENST00000458635 123 ntBASIC1.11□□□□□ -2.23
CLCF1Q9UBD9 CYCSP23-201ENST00000519781 313 ntBASIC1.11□□□□□ -2.23
CLCF1Q9UBD9 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.11□□□□□ -2.23
CLCF1Q9UBD9 AC008269.2-201ENST00000561915 1105 ntBASIC1.11□□□□□ -2.23
CLCF1Q9UBD9 AC090617.3-201ENST00000573670 475 ntBASIC1.11□□□□□ -2.23
CLCF1Q9UBD9 MIR3937-201ENST00000580135 106 ntBASIC1.11□□□□□ -2.23
CLCF1Q9UBD9 AC011712.1-201ENST00000588959 234 ntBASIC1.11□□□□□ -2.23
CLCF1Q9UBD9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.11□□□□□ -2.23
CLCF1Q9UBD9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.11□□□□□ -2.23
CLCF1Q9UBD9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
CLCF1Q9UBD9 Y_RNA.2-201ENST00000362330 96 ntBASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 Y_RNA.72-201ENST00000362894 103 ntBASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 Y_RNA.106-201ENST00000363189 100 ntBASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 RNU6-700P-201ENST00000391043 107 ntBASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 MRPL35P1-201ENST00000404272 572 ntBASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 MIR548F5-201ENST00000408421 86 ntBASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 RNU6-1186P-201ENST00000410429 97 ntBASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 RPS3AP52-201ENST00000435639 297 ntBASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 AC107399.1-201ENST00000451226 265 ntBASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 AC026782.1-201ENST00000512952 449 ntBASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 RNU6-358P-201ENST00000516564 75 ntBASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 RNU6-107P-201ENST00000516643 102 ntBASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 FRG2DP-202ENST00000566967 323 ntBASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 MIR5701-3-201ENST00000578890 82 ntBASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 MIR5701-1-201ENST00000585138 82 ntBASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 AC060780.3-201ENST00000589464 80 ntBASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 MIR5701-2-201ENST00000615634 82 ntBASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 U6.73-201ENST00000619194 103 ntBASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 AL133216.2-202ENST00000634512 349 ntBASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 U6.108-201ENST00000637764 58 ntBASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
CLCF1Q9UBD9 RNU6-1123P-201ENST00000362347 106 ntBASIC1.09□□□□□ -2.23
CLCF1Q9UBD9 RNU6-222P-201ENST00000362438 107 ntBASIC1.09□□□□□ -2.23
CLCF1Q9UBD9 RNU6-1065P-201ENST00000384513 106 ntBASIC1.09□□□□□ -2.23
CLCF1Q9UBD9 RNU6-192P-201ENST00000391253 100 ntBASIC1.09□□□□□ -2.23
CLCF1Q9UBD9 MIR190B-201ENST00000401119 79 ntBASIC1.09□□□□□ -2.23
CLCF1Q9UBD9 Y_RNA.594-201ENST00000410373 140 ntBASIC1.09□□□□□ -2.23
CLCF1Q9UBD9 RNU6-1050P-201ENST00000410388 107 ntBASIC1.09□□□□□ -2.23
CLCF1Q9UBD9 RN7SKP200-201ENST00000410564 320 ntBASIC1.09□□□□□ -2.23
CLCF1Q9UBD9 MTCYBP10-201ENST00000424905 650 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 370.9 ms