Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.14□□□□□ -2.07
SMARCAL1Q9NZC9 AP002001.1-203ENST00000534002 267 ntBASIC2.14□□□□□ -2.07
SMARCAL1Q9NZC9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.14□□□□□ -2.07
SMARCAL1Q9NZC9 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.14□□□□□ -2.07
SMARCAL1Q9NZC9 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.14□□□□□ -2.07
SMARCAL1Q9NZC9 AL161670.1-201ENST00000554348 137 ntBASIC2.14□□□□□ -2.07
SMARCAL1Q9NZC9 AC233702.2-202ENST00000562547 291 ntBASIC2.14□□□□□ -2.07
SMARCAL1Q9NZC9 Y_RNA.783-201ENST00000613546 102 ntBASIC2.14□□□□□ -2.07
SMARCAL1Q9NZC9 MIR8062-201ENST00000621515 85 ntBASIC2.14□□□□□ -2.07
SMARCAL1Q9NZC9 AC068205.3-201ENST00000636385 468 ntBASIC2.14□□□□□ -2.07
SMARCAL1Q9NZC9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.14□□□□□ -2.07
SMARCAL1Q9NZC9 LINC02555-201ENST00000563933 1951 ntBASIC2.14□□□□□ -2.07
SMARCAL1Q9NZC9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 RNU6-1305P-201ENST00000364353 104 ntBASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 Y_RNA.376-201ENST00000365638 108 ntBASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 RNU6-472P-201ENST00000384299 107 ntBASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 MIR1302-3-201ENST00000408128 138 ntBASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 U3.40-201ENST00000408706 208 ntBASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 RNU4-30P-201ENST00000410245 143 ntBASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 Y_RNA.602-201ENST00000410535 92 ntBASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 RNU2-48P-201ENST00000410694 191 ntBASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 AL135786.1-201ENST00000415892 214 ntBASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 Z98742.3-201ENST00000418637 326 ntBASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 AL356320.1-201ENST00000429616 163 ntBASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 RPS27P21-201ENST00000486977 252 ntBASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 AC025465.3-201ENST00000510570 311 ntBASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 AC074133.1-201ENST00000515696 183 ntBASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 RNU6-1143P-201ENST00000516125 104 ntBASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 RNA5SP364-201ENST00000516938 78 ntBASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 SNORA48.11-201ENST00000517015 89 ntBASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 AC022616.8-201ENST00000533569 253 ntBASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 AP000942.4-201ENST00000604811 241 ntBASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 U4.1-201ENST00000620349 87 ntBASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 AC064859.1-201ENST00000624741 174 ntBASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SMARCAL1Q9NZC9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SMARCAL1Q9NZC9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SMARCAL1Q9NZC9 snoU2_19.2-201ENST00000363024 80 ntBASIC2.12□□□□□ -2.07
SMARCAL1Q9NZC9 SNORD113-8-201ENST00000363497 74 ntBASIC2.12□□□□□ -2.07
SMARCAL1Q9NZC9 Y_RNA.452-201ENST00000384202 108 ntBASIC2.12□□□□□ -2.07
SMARCAL1Q9NZC9 Y_RNA.461-201ENST00000384263 103 ntBASIC2.12□□□□□ -2.07
SMARCAL1Q9NZC9 Y_RNA.483-201ENST00000384380 101 ntBASIC2.12□□□□□ -2.07
SMARCAL1Q9NZC9 RNU6-102P-201ENST00000384485 104 ntBASIC2.12□□□□□ -2.07
SMARCAL1Q9NZC9 MIR548B-201ENST00000385247 97 ntBASIC2.12□□□□□ -2.07
SMARCAL1Q9NZC9 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.12□□□□□ -2.07
SMARCAL1Q9NZC9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.12□□□□□ -2.07
SMARCAL1Q9NZC9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.12□□□□□ -2.07
SMARCAL1Q9NZC9 AC018868.1-201ENST00000491307 315 ntBASIC2.12□□□□□ -2.07
SMARCAL1Q9NZC9 RNU6-966P-201ENST00000516479 104 ntBASIC2.12□□□□□ -2.07
SMARCAL1Q9NZC9 RNU7-193P-201ENST00000516723 65 ntBASIC2.12□□□□□ -2.07
SMARCAL1Q9NZC9 CYCSP23-201ENST00000519781 313 ntBASIC2.12□□□□□ -2.07
SMARCAL1Q9NZC9 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.12□□□□□ -2.07
SMARCAL1Q9NZC9 CYCSP26-201ENST00000534107 320 ntBASIC2.12□□□□□ -2.07
SMARCAL1Q9NZC9 MIR5089-201ENST00000580047 84 ntBASIC2.12□□□□□ -2.07
SMARCAL1Q9NZC9 MIR3124-201ENST00000582636 67 ntBASIC2.12□□□□□ -2.07
SMARCAL1Q9NZC9 MIR3935-201ENST00000583472 104 ntBASIC2.12□□□□□ -2.07
SMARCAL1Q9NZC9 RPL17P51-201ENST00000605218 238 ntBASIC2.12□□□□□ -2.07
SMARCAL1Q9NZC9 AC091932.3-201ENST00000624223 323 ntBASIC2.12□□□□□ -2.07
SMARCAL1Q9NZC9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.11□□□□□ -2.07
SMARCAL1Q9NZC9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.11□□□□□ -2.07
SMARCAL1Q9NZC9 Y_RNA.101-201ENST00000363154 102 ntBASIC2.11□□□□□ -2.07
SMARCAL1Q9NZC9 Y_RNA.286-201ENST00000364813 102 ntBASIC2.11□□□□□ -2.07
SMARCAL1Q9NZC9 RNU6-1175P-201ENST00000365200 107 ntBASIC2.11□□□□□ -2.07
SMARCAL1Q9NZC9 RNU6-1026P-201ENST00000384465 108 ntBASIC2.11□□□□□ -2.07
SMARCAL1Q9NZC9 SNORA3.2-201ENST00000408221 125 ntBASIC2.11□□□□□ -2.07
SMARCAL1Q9NZC9 MIR1302-6-201ENST00000408466 90 ntBASIC2.11□□□□□ -2.07
SMARCAL1Q9NZC9 HMGN2P18-201ENST00000450680 270 ntBASIC2.11□□□□□ -2.07
SMARCAL1Q9NZC9 RPL23AP3-201ENST00000453844 468 ntBASIC2.11□□□□□ -2.07
SMARCAL1Q9NZC9 HMGN2P9-201ENST00000476875 229 ntBASIC2.11□□□□□ -2.07
SMARCAL1Q9NZC9 IGKV3-31-201ENST00000523109 329 ntBASIC2.11□□□□□ -2.07
SMARCAL1Q9NZC9 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.11□□□□□ -2.07
SMARCAL1Q9NZC9 AC005176.2-201ENST00000596933 147 ntBASIC2.11□□□□□ -2.07
SMARCAL1Q9NZC9 AL109918.3-201ENST00000603072 338 ntBASIC2.11□□□□□ -2.07
SMARCAL1Q9NZC9 AC004467.1-201ENST00000615678 330 ntBASIC2.11□□□□□ -2.07
SMARCAL1Q9NZC9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
SMARCAL1Q9NZC9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SMARCAL1Q9NZC9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.1□□□□□ -2.07
SMARCAL1Q9NZC9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SMARCAL1Q9NZC9 Y_RNA.84-201ENST00000363011 104 ntBASIC2.1□□□□□ -2.07
SMARCAL1Q9NZC9 SNORA72.2-201ENST00000365028 127 ntBASIC2.1□□□□□ -2.07
SMARCAL1Q9NZC9 SNORA67.3-201ENST00000384366 140 ntBASIC2.1□□□□□ -2.07
SMARCAL1Q9NZC9 Y_RNA.570-201ENST00000384750 101 ntBASIC2.1□□□□□ -2.07
SMARCAL1Q9NZC9 MIR561-201ENST00000385216 97 ntBASIC2.1□□□□□ -2.07
SMARCAL1Q9NZC9 MIR1283-1-201ENST00000408494 87 ntBASIC2.1□□□□□ -2.07
SMARCAL1Q9NZC9 RNA5SP425-201ENST00000410336 112 ntBASIC2.1□□□□□ -2.07
SMARCAL1Q9NZC9 OOSP1P1-201ENST00000423265 274 ntBASIC2.1□□□□□ -2.07
SMARCAL1Q9NZC9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.1□□□□□ -2.07
SMARCAL1Q9NZC9 RNU6-991P-201ENST00000516168 107 ntBASIC2.1□□□□□ -2.07
SMARCAL1Q9NZC9 RNU7-110P-201ENST00000516891 62 ntBASIC2.1□□□□□ -2.07
SMARCAL1Q9NZC9 RNA5SP490-201ENST00000517141 136 ntBASIC2.1□□□□□ -2.07
SMARCAL1Q9NZC9 RNU6-667P-201ENST00000517186 102 ntBASIC2.1□□□□□ -2.07
SMARCAL1Q9NZC9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.1□□□□□ -2.07
SMARCAL1Q9NZC9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.1□□□□□ -2.07
SMARCAL1Q9NZC9 MIR1273D-201ENST00000577266 86 ntBASIC2.1□□□□□ -2.07
SMARCAL1Q9NZC9 AC025754.2-201ENST00000606491 432 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 203.6 ms