Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RNU6-95P-201ENST00000384697 107 ntBASIC0.85□□□□□ -2.27
LRRC40Q9H9A6 MIR200A-201ENST00000384875 90 ntBASIC0.85□□□□□ -2.27
LRRC40Q9H9A6 RNU2-64P-201ENST00000411315 191 ntBASIC0.85□□□□□ -2.27
LRRC40Q9H9A6 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.85□□□□□ -2.27
LRRC40Q9H9A6 CALM2P4-201ENST00000430810 426 ntBASIC0.85□□□□□ -2.27
LRRC40Q9H9A6 DAP3P1-201ENST00000441522 278 ntBASIC0.85□□□□□ -2.27
LRRC40Q9H9A6 MTND1P11-201ENST00000456661 876 ntBASIC0.85□□□□□ -2.27
LRRC40Q9H9A6 RPL30P10-201ENST00000488148 337 ntBASIC0.85□□□□□ -2.27
LRRC40Q9H9A6 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.85□□□□□ -2.27
LRRC40Q9H9A6 RNU6-917P-201ENST00000516294 104 ntBASIC0.85□□□□□ -2.27
LRRC40Q9H9A6 AC090142.3-201ENST00000519012 385 ntBASIC0.85□□□□□ -2.27
LRRC40Q9H9A6 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.85□□□□□ -2.27
LRRC40Q9H9A6 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.85□□□□□ -2.27
LRRC40Q9H9A6 ZNF519P2-201ENST00000557032 169 ntBASIC0.85□□□□□ -2.27
LRRC40Q9H9A6 7SK.7-201ENST00000603504 247 ntBASIC0.85□□□□□ -2.27
LRRC40Q9H9A6 AL357312.1-201ENST00000603879 298 ntBASIC0.85□□□□□ -2.27
LRRC40Q9H9A6 AC006435.5-201ENST00000624486 112 ntBASIC0.85□□□□□ -2.27
LRRC40Q9H9A6 MIR6079-201ENST00000635807 62 ntBASIC0.85□□□□□ -2.27
LRRC40Q9H9A6 RNU6-1252P-201ENST00000363054 104 ntBASIC0.84□□□□□ -2.27
LRRC40Q9H9A6 Y_RNA.338-201ENST00000365320 114 ntBASIC0.84□□□□□ -2.27
LRRC40Q9H9A6 SNORA2.2-201ENST00000365473 135 ntBASIC0.84□□□□□ -2.27
LRRC40Q9H9A6 RNU6-424P-201ENST00000384367 105 ntBASIC0.84□□□□□ -2.27
LRRC40Q9H9A6 MIR517A-201ENST00000385001 87 ntBASIC0.84□□□□□ -2.27
LRRC40Q9H9A6 MTCO3P40-201ENST00000392516 676 ntBASIC0.84□□□□□ -2.27
LRRC40Q9H9A6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.84□□□□□ -2.27
LRRC40Q9H9A6 AL590632.1-201ENST00000424289 371 ntBASIC0.84□□□□□ -2.27
LRRC40Q9H9A6 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.84□□□□□ -2.27
LRRC40Q9H9A6 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.84□□□□□ -2.27
LRRC40Q9H9A6 AC010598.1-201ENST00000510378 103 ntBASIC0.84□□□□□ -2.27
LRRC40Q9H9A6 PSMC1P5-201ENST00000512850 177 ntBASIC0.84□□□□□ -2.27
LRRC40Q9H9A6 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
LRRC40Q9H9A6 RNU6-197P-201ENST00000516680 100 ntBASIC0.84□□□□□ -2.27
LRRC40Q9H9A6 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.84□□□□□ -2.27
LRRC40Q9H9A6 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.84□□□□□ -2.27
LRRC40Q9H9A6 PIGPP4-201ENST00000584447 307 ntBASIC0.84□□□□□ -2.27
LRRC40Q9H9A6 AC010620.1-201ENST00000601088 1102 ntBASIC0.84□□□□□ -2.27
LRRC40Q9H9A6 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.84□□□□□ -2.27
LRRC40Q9H9A6 MIR3974-201ENST00000637126 96 ntBASIC0.84□□□□□ -2.27
LRRC40Q9H9A6 AC068137.3-201ENST00000639191 341 ntBASIC0.84□□□□□ -2.27
LRRC40Q9H9A6 AC008163.1-202ENST00000636004 2889 ntBASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 MTND5P26-201ENST00000426018 1752 ntBASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 RNY1P10-201ENST00000363268 113 ntBASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 SNORD114-27-201ENST00000363766 70 ntBASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 RNU6-17P-201ENST00000384245 107 ntBASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 RNU6-18P-201ENST00000384527 107 ntBASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 RNU11-5P-201ENST00000391216 129 ntBASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 U8.16-201ENST00000391279 133 ntBASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 MIR942-201ENST00000401111 86 ntBASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 AC093303.1-201ENST00000514549 295 ntBASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 Y_RNA.693-201ENST00000516641 110 ntBASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 RNU6-107P-201ENST00000516643 102 ntBASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 RNU6-113P-201ENST00000516653 101 ntBASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 RNU2-56P-201ENST00000516826 190 ntBASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 RPL21P9-201ENST00000556149 474 ntBASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 MTND1P15-201ENST00000579262 949 ntBASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 AC016727.1-205ENST00000605437 569 ntBASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 RN7SKP299-201ENST00000606679 301 ntBASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 AC019193.3-201ENST00000609144 554 ntBASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 AC068137.4-201ENST00000638485 296 ntBASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.83□□□□□ -2.28
LRRC40Q9H9A6 RNU6-1119P-201ENST00000384349 108 ntBASIC0.82□□□□□ -2.28
LRRC40Q9H9A6 MIR608-201ENST00000384820 100 ntBASIC0.82□□□□□ -2.28
LRRC40Q9H9A6 SEPT14P3-201ENST00000439401 183 ntBASIC0.82□□□□□ -2.28
LRRC40Q9H9A6 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.82□□□□□ -2.28
LRRC40Q9H9A6 AL732372.2-207ENST00000445840 183 ntBASIC0.82□□□□□ -2.28
LRRC40Q9H9A6 SEPT14P2-201ENST00000453405 183 ntBASIC0.82□□□□□ -2.28
LRRC40Q9H9A6 AC093850.1-201ENST00000454121 251 ntBASIC0.82□□□□□ -2.28
LRRC40Q9H9A6 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.82□□□□□ -2.28
LRRC40Q9H9A6 AC022493.2-201ENST00000506122 481 ntBASIC0.82□□□□□ -2.28
LRRC40Q9H9A6 SEPT14P4-201ENST00000513445 186 ntBASIC0.82□□□□□ -2.28
LRRC40Q9H9A6 RNU6-1053P-201ENST00000515930 101 ntBASIC0.82□□□□□ -2.28
LRRC40Q9H9A6 RNU7-12P-201ENST00000516030 62 ntBASIC0.82□□□□□ -2.28
LRRC40Q9H9A6 RNU7-172P-201ENST00000517125 64 ntBASIC0.82□□□□□ -2.28
LRRC40Q9H9A6 AC091144.1-201ENST00000519573 138 ntBASIC0.82□□□□□ -2.28
LRRC40Q9H9A6 FO082796.1-201ENST00000523795 183 ntBASIC0.82□□□□□ -2.28
LRRC40Q9H9A6 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.82□□□□□ -2.28
LRRC40Q9H9A6 AL512360.1-201ENST00000555346 234 ntBASIC0.82□□□□□ -2.28
LRRC40Q9H9A6 MIR4698-201ENST00000577795 80 ntBASIC0.82□□□□□ -2.28
LRRC40Q9H9A6 MIR3973-201ENST00000579824 107 ntBASIC0.82□□□□□ -2.28
LRRC40Q9H9A6 AC010525.2-201ENST00000590920 195 ntBASIC0.82□□□□□ -2.28
LRRC40Q9H9A6 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.82□□□□□ -2.28
LRRC40Q9H9A6 AC124864.2-201ENST00000624736 186 ntBASIC0.82□□□□□ -2.28
LRRC40Q9H9A6 RNU6-969P-201ENST00000383900 105 ntBASIC0.81□□□□□ -2.28
LRRC40Q9H9A6 Y_RNA.615-201ENST00000410769 117 ntBASIC0.81□□□□□ -2.28
LRRC40Q9H9A6 RPS3AP1-201ENST00000413190 320 ntBASIC0.81□□□□□ -2.28
LRRC40Q9H9A6 MTCO3P19-201ENST00000415864 321 ntBASIC0.81□□□□□ -2.28
LRRC40Q9H9A6 RPS26P48-201ENST00000491713 339 ntBASIC0.81□□□□□ -2.28
LRRC40Q9H9A6 TRBVA-201ENST00000498804 316 ntBASIC0.81□□□□□ -2.28
LRRC40Q9H9A6 Y_RNA.665-201ENST00000516177 98 ntBASIC0.81□□□□□ -2.28
LRRC40Q9H9A6 RNU7-28P-201ENST00000516759 62 ntBASIC0.81□□□□□ -2.28
LRRC40Q9H9A6 AC136628.3-201ENST00000521868 290 ntBASIC0.81□□□□□ -2.28
LRRC40Q9H9A6 MIR3611-201ENST00000584484 83 ntBASIC0.81□□□□□ -2.28
LRRC40Q9H9A6 AC010999.1-201ENST00000611856 324 ntBASIC0.81□□□□□ -2.28
LRRC40Q9H9A6 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.81□□□□□ -2.28
LRRC40Q9H9A6 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
LRRC40Q9H9A6 RNU6-259P-201ENST00000383999 107 ntBASIC0.8□□□□□ -2.28
LRRC40Q9H9A6 MIR562-201ENST00000384894 95 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 200 ms