Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 NDUFB4P10-201ENST00000452541 359 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 AC046134.1-201ENST00000514454 666 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 Y_RNA.670-201ENST00000516255 105 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 7SK.7-201ENST00000603504 247 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 AL355802.3-201ENST00000607571 545 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 AC005014.2-201ENST00000607795 599 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 AC091895.1-201ENST00000624494 256 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
CDC42EP4Q9H3Q1 Y_RNA.184-201ENST00000363884 108 ntBASIC1.18□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU6-280P-201ENST00000364145 104 ntBASIC1.18□□□□□ -2.22
CDC42EP4Q9H3Q1 SNORD87-201ENST00000364849 89 ntBASIC1.18□□□□□ -2.22
CDC42EP4Q9H3Q1 Y_RNA.415-201ENST00000384012 112 ntBASIC1.18□□□□□ -2.22
CDC42EP4Q9H3Q1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU1-139P-201ENST00000391307 165 ntBASIC1.18□□□□□ -2.22
CDC42EP4Q9H3Q1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU6-1050P-201ENST00000410388 107 ntBASIC1.18□□□□□ -2.22
CDC42EP4Q9H3Q1 MTND1P2-201ENST00000430604 821 ntBASIC1.18□□□□□ -2.22
CDC42EP4Q9H3Q1 HSPE1P9-201ENST00000440046 311 ntBASIC1.18□□□□□ -2.22
CDC42EP4Q9H3Q1 AC112492.4-201ENST00000456549 352 ntBASIC1.18□□□□□ -2.22
CDC42EP4Q9H3Q1 AC025465.3-201ENST00000510570 311 ntBASIC1.18□□□□□ -2.22
CDC42EP4Q9H3Q1 MIR8074-201ENST00000615081 81 ntBASIC1.18□□□□□ -2.22
CDC42EP4Q9H3Q1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.18□□□□□ -2.22
CDC42EP4Q9H3Q1 AC006001.4-201ENST00000622243 395 ntBASIC1.18□□□□□ -2.22
CDC42EP4Q9H3Q1 CASC19-280ENST00000642102 1351 ntBASIC1.18□□□□□ -2.22
CDC42EP4Q9H3Q1 Y_RNA.88-201ENST00000363029 99 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU6-727P-201ENST00000363592 107 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 U3.8-201ENST00000363675 217 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU6-767P-201ENST00000384132 107 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU6-793P-201ENST00000384233 104 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU6-360P-201ENST00000390944 104 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 MIR1185-2-201ENST00000408687 86 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 USMG5P1-201ENST00000425964 177 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 snoU13.18-201ENST00000459483 104 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 AC005908.1-201ENST00000468701 347 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 RPL31P58-201ENST00000469001 379 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 RPL26P26-201ENST00000480251 434 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 AC082651.2-201ENST00000496833 166 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 AC093303.1-201ENST00000514549 295 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU6-1114P-201ENST00000516022 107 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU7-30P-201ENST00000516835 62 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 AC105029.1-201ENST00000520250 669 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 SNORA77B-201ENST00000578179 125 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 AP001485.1-201ENST00000604799 199 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 PRR13P7-201ENST00000605538 430 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 AC100812.1-201ENST00000607622 580 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 MIR6078-201ENST00000611069 100 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 AC122108.2-201ENST00000611946 526 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.17□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU6-222P-201ENST00000362438 107 ntBASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU6-845P-201ENST00000362578 103 ntBASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 Y_RNA.106-201ENST00000363189 100 ntBASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 Y_RNA.166-201ENST00000363730 102 ntBASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 Y_RNA.191-201ENST00000363972 113 ntBASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU6-281P-201ENST00000384212 103 ntBASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 Y_RNA.482-201ENST00000384377 111 ntBASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU6-601P-201ENST00000384540 107 ntBASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU6-417P-201ENST00000384712 107 ntBASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 MT-TL1-201ENST00000386347 75 ntBASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 PDCL2P1-201ENST00000419302 352 ntBASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 AC008134.1-201ENST00000420943 193 ntBASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 RPS29P28-201ENST00000446439 141 ntBASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 AC107399.1-201ENST00000451226 265 ntBASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU6-1146P-201ENST00000516282 102 ntBASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 Y_RNA.691-201ENST00000516611 103 ntBASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 Y_RNA.708-201ENST00000516950 96 ntBASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 AC073413.2-201ENST00000604332 360 ntBASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 MZT1P2-201ENST00000604387 248 ntBASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 AC009229.3-201ENST00000608056 282 ntBASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 U6.108-201ENST00000637764 58 ntBASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 AC068700.1-201ENST00000565862 3754 ntBASIC1.16□□□□□ -2.22
CDC42EP4Q9H3Q1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 RNU6-874P-201ENST00000362390 105 ntBASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 RNU5F-3P-201ENST00000363767 117 ntBASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 Y_RNA.179-201ENST00000363844 90 ntBASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 SNORA72.2-201ENST00000365028 127 ntBASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 Y_RNA.404-201ENST00000383978 102 ntBASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 MIR515-2-201ENST00000384883 83 ntBASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 MIR515-1-201ENST00000384884 83 ntBASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 RPL37P10-201ENST00000412884 288 ntBASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 AL161935.2-201ENST00000414627 60 ntBASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 EBAG9P1-201ENST00000418955 543 ntBASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 JTBP1-201ENST00000441314 247 ntBASIC1.15□□□□□ -2.23
CDC42EP4Q9H3Q1 AC069257.2-201ENST00000441819 155 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 202.1 ms