Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AC087190.4-201ENST00000574616 8334 ntBASIC2.21□□□□□ -2.06
KRTAP3-1Q9BYR8 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP3-1Q9BYR8 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
KRTAP3-1Q9BYR8 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP3-1Q9BYR8 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP3-1Q9BYR8 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
KRTAP3-1Q9BYR8 Y_RNA.313-201ENST00000365095 103 ntBASIC2.2□□□□□ -2.06
KRTAP3-1Q9BYR8 RNU6-163P-201ENST00000384396 106 ntBASIC2.2□□□□□ -2.06
KRTAP3-1Q9BYR8 Y_RNA.620-201ENST00000411009 88 ntBASIC2.2□□□□□ -2.06
KRTAP3-1Q9BYR8 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC2.2□□□□□ -2.06
KRTAP3-1Q9BYR8 PHBP16-201ENST00000446318 950 ntBASIC2.2□□□□□ -2.06
KRTAP3-1Q9BYR8 AC006539.3-201ENST00000454258 129 ntBASIC2.2□□□□□ -2.06
KRTAP3-1Q9BYR8 RNU6-267P-201ENST00000516714 103 ntBASIC2.2□□□□□ -2.06
KRTAP3-1Q9BYR8 IGLV3-17-201ENST00000519099 244 ntBASIC2.2□□□□□ -2.06
KRTAP3-1Q9BYR8 TOMM20P2-201ENST00000540082 421 ntBASIC2.2□□□□□ -2.06
KRTAP3-1Q9BYR8 MIR4662A-201ENST00000637499 67 ntBASIC2.2□□□□□ -2.06
KRTAP3-1Q9BYR8 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.2□□□□□ -2.06
KRTAP3-1Q9BYR8 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP3-1Q9BYR8 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC2.2□□□□□ -2.06
KRTAP3-1Q9BYR8 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP3-1Q9BYR8 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP3-1Q9BYR8 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC2.2□□□□□ -2.06
KRTAP3-1Q9BYR8 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 AC092881.1-201ENST00000638218 2733 ntBASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 AL353746.1-201ENST00000566293 6881 ntBASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 SNORA1.1-201ENST00000364671 133 ntBASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 Y_RNA.467-201ENST00000384297 102 ntBASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 RNU6ATAC5P-201ENST00000388104 126 ntBASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 RNU2-40P-201ENST00000410833 196 ntBASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 COX6B1P1-201ENST00000415962 213 ntBASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 AL135938.1-201ENST00000443141 297 ntBASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 AL162151.2-201ENST00000448875 158 ntBASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 RN7SL808P-201ENST00000496066 299 ntBASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 AC114811.1-201ENST00000507207 168 ntBASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 RPPH1-2P-201ENST00000516688 293 ntBASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 RNA5SP34-201ENST00000516887 130 ntBASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 MIR3667-201ENST00000581025 74 ntBASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 SUMO2P15-201ENST00000604285 278 ntBASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 SNORA28-201ENST00000606769 126 ntBASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 AC211433.2-201ENST00000608433 387 ntBASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 AC096644.4-201ENST00000563417 2912 ntBASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
KRTAP3-1Q9BYR8 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 RNA5SP502-201ENST00000362694 119 ntBASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 SNORA71.2-201ENST00000364941 134 ntBASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 SNORA70.7-201ENST00000384159 133 ntBASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 RNU6-616P-201ENST00000384353 107 ntBASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 MIR708-201ENST00000390708 88 ntBASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 MIR1267-201ENST00000408723 78 ntBASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 RPL32P35-201ENST00000415214 394 ntBASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 STAG3L5P-204ENST00000443759 179 ntBASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 AC006064.5-201ENST00000541782 248 ntBASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 MIR3152-201ENST00000579801 74 ntBASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 MIR4737-201ENST00000583979 81 ntBASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 AC006130.2-201ENST00000586202 326 ntBASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 AC079587.1-201ENST00000603846 277 ntBASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 AC027279.3-201ENST00000625055 122 ntBASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 AL512310.12-203ENST00000640543 90 ntBASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 AC073346.2-201ENST00000624724 2058 ntBASIC2.18□□□□□ -2.06
KRTAP3-1Q9BYR8 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 RNU6-1313P-201ENST00000362622 102 ntBASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 RNU6-862P-201ENST00000362804 105 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 510 ms