Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 MIR3660-201ENST00000584845 100 ntBASIC1.23□□□□□ -2.21
NPAS2Q99743 SNORD115-32-201ENST00000364079 82 ntBASIC1.22□□□□□ -2.21
NPAS2Q99743 RNU6-1305P-201ENST00000364353 104 ntBASIC1.22□□□□□ -2.21
NPAS2Q99743 Y_RNA.319-201ENST00000365138 92 ntBASIC1.22□□□□□ -2.21
NPAS2Q99743 RNU6-876P-201ENST00000391295 104 ntBASIC1.22□□□□□ -2.21
NPAS2Q99743 RNA5SP504-201ENST00000410676 117 ntBASIC1.22□□□□□ -2.21
NPAS2Q99743 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.22□□□□□ -2.21
NPAS2Q99743 MTND1P2-201ENST00000430604 821 ntBASIC1.22□□□□□ -2.21
NPAS2Q99743 HMGN1P7-201ENST00000491722 313 ntBASIC1.22□□□□□ -2.21
NPAS2Q99743 AC026782.1-201ENST00000512952 449 ntBASIC1.22□□□□□ -2.21
NPAS2Q99743 RNU7-30P-201ENST00000516835 62 ntBASIC1.22□□□□□ -2.21
NPAS2Q99743 RNU6-58P-201ENST00000517143 103 ntBASIC1.22□□□□□ -2.21
NPAS2Q99743 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.22□□□□□ -2.21
NPAS2Q99743 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.22□□□□□ -2.21
NPAS2Q99743 AL160236.1-201ENST00000556317 195 ntBASIC1.22□□□□□ -2.21
NPAS2Q99743 AC008269.2-201ENST00000561915 1105 ntBASIC1.22□□□□□ -2.21
NPAS2Q99743 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.22□□□□□ -2.21
NPAS2Q99743 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.22□□□□□ -2.21
NPAS2Q99743 AC008873.1-201ENST00000625051 138 ntBASIC1.22□□□□□ -2.21
NPAS2Q99743 AC091812.1-201ENST00000432235 1948 ntBASIC1.22□□□□□ -2.21
NPAS2Q99743 Y_RNA.72-201ENST00000362894 103 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 Y_RNA.122-201ENST00000363331 96 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 RNU6-727P-201ENST00000363592 107 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 RNU6-873P-201ENST00000363833 107 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 SNORD87-201ENST00000364849 89 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 Y_RNA.405-201ENST00000383979 100 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 Y_RNA.451-201ENST00000384200 100 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 SNORA67.2-201ENST00000384300 149 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 Y_RNA.524-201ENST00000384564 100 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 Y_RNA.561-201ENST00000384694 100 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 RNU6-331P-201ENST00000384724 107 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 MIR153-2-201ENST00000385225 87 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 MIR518E-201ENST00000385252 88 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 SNORA40.6-201ENST00000391153 128 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
NPAS2Q99743 Y_RNA.594-201ENST00000410373 140 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 SNX2P2-201ENST00000424553 323 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.21□□□□□ -2.22
NPAS2Q99743 SNORD5.1-201ENST00000458800 75 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 MTND4P17-201ENST00000470444 350 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 Y_RNA.670-201ENST00000516255 105 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 SNORA25.14-201ENST00000516481 132 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 RNU6-1016P-201ENST00000516689 94 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.21□□□□□ -2.22
NPAS2Q99743 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.21□□□□□ -2.22
NPAS2Q99743 AC018462.2-201ENST00000605375 395 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 MIR6504-201ENST00000613520 61 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.21□□□□□ -2.22
NPAS2Q99743 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
NPAS2Q99743 MTND4P12-201ENST00000498999 1377 ntBASIC1.21□□□□□ -2.22
NPAS2Q99743 ZNF299P-201ENST00000406845 1804 ntBASIC1.2□□□□□ -2.22
NPAS2Q99743 RNU6-222P-201ENST00000362438 107 ntBASIC1.2□□□□□ -2.22
NPAS2Q99743 SNORD115-8-201ENST00000363856 82 ntBASIC1.2□□□□□ -2.22
NPAS2Q99743 RNU6-595P-201ENST00000363944 107 ntBASIC1.2□□□□□ -2.22
NPAS2Q99743 SNORD115-38-201ENST00000365037 82 ntBASIC1.2□□□□□ -2.22
NPAS2Q99743 Y_RNA.339-201ENST00000365325 102 ntBASIC1.2□□□□□ -2.22
NPAS2Q99743 RNU6-596P-201ENST00000365395 98 ntBASIC1.2□□□□□ -2.22
NPAS2Q99743 RNU6-767P-201ENST00000384132 107 ntBASIC1.2□□□□□ -2.22
NPAS2Q99743 RNU6-17P-201ENST00000384245 107 ntBASIC1.2□□□□□ -2.22
NPAS2Q99743 RNU6-18P-201ENST00000384527 107 ntBASIC1.2□□□□□ -2.22
NPAS2Q99743 RNU6-950P-201ENST00000384651 107 ntBASIC1.2□□□□□ -2.22
NPAS2Q99743 RNU6-541P-201ENST00000384709 110 ntBASIC1.2□□□□□ -2.22
NPAS2Q99743 MIR150-201ENST00000385048 84 ntBASIC1.2□□□□□ -2.22
NPAS2Q99743 MT-TL1-201ENST00000386347 75 ntBASIC1.2□□□□□ -2.22
NPAS2Q99743 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.2□□□□□ -2.22
NPAS2Q99743 AP000870.1-201ENST00000472927 406 ntBASIC1.2□□□□□ -2.22
NPAS2Q99743 RPL7P42-201ENST00000481005 679 ntBASIC1.2□□□□□ -2.22
NPAS2Q99743 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.2□□□□□ -2.22
NPAS2Q99743 AL590705.4-201ENST00000532209 134 ntBASIC1.2□□□□□ -2.22
NPAS2Q99743 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.2□□□□□ -2.22
NPAS2Q99743 AL355802.3-201ENST00000607571 545 ntBASIC1.2□□□□□ -2.22
NPAS2Q99743 AC009229.3-201ENST00000608056 282 ntBASIC1.2□□□□□ -2.22
NPAS2Q99743 AC122108.2-201ENST00000611946 526 ntBASIC1.2□□□□□ -2.22
NPAS2Q99743 AC006001.4-201ENST00000622243 395 ntBASIC1.2□□□□□ -2.22
NPAS2Q99743 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
NPAS2Q99743 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
NPAS2Q99743 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
NPAS2Q99743 Y_RNA.2-201ENST00000362330 96 ntBASIC1.19□□□□□ -2.22
NPAS2Q99743 RNU6-1123P-201ENST00000362347 106 ntBASIC1.19□□□□□ -2.22
NPAS2Q99743 Y_RNA.88-201ENST00000363029 99 ntBASIC1.19□□□□□ -2.22
NPAS2Q99743 SNORA33-201ENST00000363664 130 ntBASIC1.19□□□□□ -2.22
NPAS2Q99743 Y_RNA.796-201ENST00000364268 102 ntBASIC1.19□□□□□ -2.22
NPAS2Q99743 Y_RNA.279-201ENST00000364763 95 ntBASIC1.19□□□□□ -2.22
NPAS2Q99743 Y_RNA.799-201ENST00000364992 102 ntBASIC1.19□□□□□ -2.22
NPAS2Q99743 SNORA4.2-201ENST00000365313 147 ntBASIC1.19□□□□□ -2.22
NPAS2Q99743 RNU6-601P-201ENST00000384540 107 ntBASIC1.19□□□□□ -2.22
NPAS2Q99743 MIR513A1-201ENST00000385138 129 ntBASIC1.19□□□□□ -2.22
NPAS2Q99743 RNU6-1050P-201ENST00000410388 107 ntBASIC1.19□□□□□ -2.22
NPAS2Q99743 RNU4-14P-201ENST00000410858 122 ntBASIC1.19□□□□□ -2.22
NPAS2Q99743 RNU6-57P-201ENST00000411348 103 ntBASIC1.19□□□□□ -2.22
NPAS2Q99743 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.19□□□□□ -2.22
NPAS2Q99743 AC074085.1-201ENST00000413598 418 ntBASIC1.19□□□□□ -2.22
NPAS2Q99743 PDCL2P1-201ENST00000419302 352 ntBASIC1.19□□□□□ -2.22
NPAS2Q99743 AL353997.1-201ENST00000432936 108 ntBASIC1.19□□□□□ -2.22
NPAS2Q99743 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.19□□□□□ -2.22
NPAS2Q99743 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.19□□□□□ -2.22
NPAS2Q99743 MTND3P10-201ENST00000450967 341 ntBASIC1.19□□□□□ -2.22
NPAS2Q99743 AC107399.1-201ENST00000451226 265 ntBASIC1.19□□□□□ -2.22
NPAS2Q99743 RNU7-57P-201ENST00000459540 60 ntBASIC1.19□□□□□ -2.22
NPAS2Q99743 RPS26P45-201ENST00000471748 340 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 229.7 ms