Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.34□□□□□ -2.2
VMP1Q96GC9 U8.1-201ENST00000362843 134 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 Y_RNA.157-201ENST00000363638 102 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 Y_RNA.405-201ENST00000383979 100 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 RNU6-1013P-201ENST00000384180 107 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 Y_RNA.451-201ENST00000384200 100 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 Y_RNA.524-201ENST00000384564 100 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 Y_RNA.561-201ENST00000384694 100 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 MIR10B-201ENST00000385011 110 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 AP1B1P2-201ENST00000416196 106 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 AC009161.1-201ENST00000417306 376 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 TOMM22P2-201ENST00000430735 237 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 SNRPGP13-201ENST00000442212 177 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.33□□□□□ -2.2
VMP1Q96GC9 AC009474.2-201ENST00000451383 136 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 SNORD65B-201ENST00000459126 73 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 RPS29P25-201ENST00000481709 171 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 RNU6-864P-201ENST00000516256 108 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 RNU6-107P-201ENST00000516643 102 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 RNU6-273P-201ENST00000516937 96 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.33□□□□□ -2.2
VMP1Q96GC9 MIR4438-201ENST00000585271 93 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 AC073349.3-201ENST00000617616 186 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 AC006435.5-201ENST00000624486 112 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 SNORD3E-202ENST00000627253 216 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 MIR3688-2-201ENST00000636963 87 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 AC100810.6-201ENST00000638068 285 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 ZNF299P-201ENST00000406845 1804 ntBASIC1.33□□□□□ -2.2
VMP1Q96GC9 Y_RNA.453-201ENST00000384223 109 ntBASIC1.32□□□□□ -2.2
VMP1Q96GC9 Y_RNA.490-201ENST00000384413 102 ntBASIC1.32□□□□□ -2.2
VMP1Q96GC9 RNU6-1148P-201ENST00000410992 104 ntBASIC1.32□□□□□ -2.2
VMP1Q96GC9 AC015922.2-201ENST00000435593 184 ntBASIC1.32□□□□□ -2.2
VMP1Q96GC9 MTND4LP16-201ENST00000440828 295 ntBASIC1.32□□□□□ -2.2
VMP1Q96GC9 RPS27P22-201ENST00000478056 241 ntBASIC1.32□□□□□ -2.2
VMP1Q96GC9 Y_RNA.655-201ENST00000515919 96 ntBASIC1.32□□□□□ -2.2
VMP1Q96GC9 MIR5695-201ENST00000579717 85 ntBASIC1.32□□□□□ -2.2
VMP1Q96GC9 BNIP3P10-201ENST00000605360 577 ntBASIC1.32□□□□□ -2.2
VMP1Q96GC9 AC090517.2-201ENST00000614966 680 ntBASIC1.32□□□□□ -2.2
VMP1Q96GC9 MIR3662-201ENST00000637030 95 ntBASIC1.32□□□□□ -2.2
VMP1Q96GC9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.31□□□□□ -2.2
VMP1Q96GC9 RNU6-595P-201ENST00000363944 107 ntBASIC1.31□□□□□ -2.2
VMP1Q96GC9 RNU6-831P-201ENST00000384548 107 ntBASIC1.31□□□□□ -2.2
VMP1Q96GC9 SNORD115-47-201ENST00000391226 86 ntBASIC1.31□□□□□ -2.2
VMP1Q96GC9 Y_RNA.595-201ENST00000410403 105 ntBASIC1.31□□□□□ -2.2
VMP1Q96GC9 AC010598.1-201ENST00000510378 103 ntBASIC1.31□□□□□ -2.2
VMP1Q96GC9 RNA5SP404-201ENST00000517118 132 ntBASIC1.31□□□□□ -2.2
VMP1Q96GC9 RNU1-54P-201ENST00000517181 120 ntBASIC1.31□□□□□ -2.2
VMP1Q96GC9 AC091144.1-201ENST00000519573 138 ntBASIC1.31□□□□□ -2.2
VMP1Q96GC9 AC027419.1-201ENST00000522976 328 ntBASIC1.31□□□□□ -2.2
VMP1Q96GC9 AL513534.2-201ENST00000603836 250 ntBASIC1.31□□□□□ -2.2
VMP1Q96GC9 snoU13.31-201ENST00000607291 104 ntBASIC1.31□□□□□ -2.2
VMP1Q96GC9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.31□□□□□ -2.2
VMP1Q96GC9 AC018630.2-201ENST00000534866 2403 ntBASIC1.3□□□□□ -2.2
VMP1Q96GC9 SNORA25-201ENST00000384384 134 ntBASIC1.3□□□□□ -2.2
VMP1Q96GC9 FGF7P8-201ENST00000402994 292 ntBASIC1.3□□□□□ -2.2
VMP1Q96GC9 MIR548F1-201ENST00000408667 84 ntBASIC1.3□□□□□ -2.2
VMP1Q96GC9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.3□□□□□ -2.2
VMP1Q96GC9 MTND1P34-201ENST00000438556 671 ntBASIC1.3□□□□□ -2.2
VMP1Q96GC9 AC010469.2-201ENST00000496412 480 ntBASIC1.3□□□□□ -2.2
VMP1Q96GC9 Y_RNA.683-201ENST00000516508 93 ntBASIC1.3□□□□□ -2.2
VMP1Q96GC9 RNU6-1088P-201ENST00000516850 104 ntBASIC1.3□□□□□ -2.2
VMP1Q96GC9 Y_RNA.706-201ENST00000516933 99 ntBASIC1.3□□□□□ -2.2
VMP1Q96GC9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.3□□□□□ -2.2
VMP1Q96GC9 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.3□□□□□ -2.2
VMP1Q96GC9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.3□□□□□ -2.2
VMP1Q96GC9 MIR4421-201ENST00000578133 69 ntBASIC1.3□□□□□ -2.2
VMP1Q96GC9 SNORA28-201ENST00000606769 126 ntBASIC1.3□□□□□ -2.2
VMP1Q96GC9 BX284668.6-201ENST00000606899 438 ntBASIC1.3□□□□□ -2.2
VMP1Q96GC9 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.29□□□□□ -2.2
VMP1Q96GC9 SNORA7.1-201ENST00000363750 139 ntBASIC1.29□□□□□ -2.2
VMP1Q96GC9 RNU6-281P-201ENST00000384212 103 ntBASIC1.29□□□□□ -2.2
VMP1Q96GC9 MIR758-201ENST00000390227 88 ntBASIC1.29□□□□□ -2.2
VMP1Q96GC9 RNU11-5P-201ENST00000391216 129 ntBASIC1.29□□□□□ -2.2
VMP1Q96GC9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.29□□□□□ -2.2
VMP1Q96GC9 MTND3P23-201ENST00000431980 347 ntBASIC1.29□□□□□ -2.2
VMP1Q96GC9 MRPS10P1-201ENST00000448483 130 ntBASIC1.29□□□□□ -2.2
VMP1Q96GC9 AC092991.1-201ENST00000477176 376 ntBASIC1.29□□□□□ -2.2
VMP1Q96GC9 AC092989.1-201ENST00000481235 277 ntBASIC1.29□□□□□ -2.2
VMP1Q96GC9 AL163540.1-201ENST00000485382 386 ntBASIC1.29□□□□□ -2.2
VMP1Q96GC9 AC108729.3-201ENST00000513484 108 ntBASIC1.29□□□□□ -2.2
VMP1Q96GC9 CYCSP23-201ENST00000519781 313 ntBASIC1.29□□□□□ -2.2
VMP1Q96GC9 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.29□□□□□ -2.2
VMP1Q96GC9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.29□□□□□ -2.2
VMP1Q96GC9 AC023157.2-201ENST00000540596 141 ntBASIC1.29□□□□□ -2.2
VMP1Q96GC9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.29□□□□□ -2.2
VMP1Q96GC9 HSPE1P19-201ENST00000603327 295 ntBASIC1.29□□□□□ -2.2
VMP1Q96GC9 AC100812.1-201ENST00000607622 580 ntBASIC1.29□□□□□ -2.2
VMP1Q96GC9 AC106754.2-201ENST00000623006 233 ntBASIC1.29□□□□□ -2.2
VMP1Q96GC9 Y_RNA.6-201ENST00000362350 114 ntBASIC1.28□□□□□ -2.2
VMP1Q96GC9 RNU4-76P-201ENST00000364509 141 ntBASIC1.28□□□□□ -2.2
VMP1Q96GC9 MIR660-201ENST00000385235 97 ntBASIC1.28□□□□□ -2.2
VMP1Q96GC9 RPL23AP36-201ENST00000413895 458 ntBASIC1.28□□□□□ -2.2
VMP1Q96GC9 USP9YP16-201ENST00000430287 407 ntBASIC1.28□□□□□ -2.2
VMP1Q96GC9 USP9YP23-201ENST00000455085 407 ntBASIC1.28□□□□□ -2.2
VMP1Q96GC9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.28□□□□□ -2.2
VMP1Q96GC9 RNU6-1114P-201ENST00000516022 107 ntBASIC1.28□□□□□ -2.2
VMP1Q96GC9 RNU6-566P-201ENST00000516790 107 ntBASIC1.28□□□□□ -2.2
VMP1Q96GC9 RNU6-165P-201ENST00000517170 99 ntBASIC1.28□□□□□ -2.2
VMP1Q96GC9 MIR4498-201ENST00000577599 66 ntBASIC1.28□□□□□ -2.2
VMP1Q96GC9 AC016727.1-205ENST00000605437 569 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 885 ms