Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SNORD113.3-201ENST00000364630 78 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 MIR454-201ENST00000390180 115 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 RNA5SP482-201ENST00000391269 118 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 MIR891A-201ENST00000401237 79 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 SNORD71-201ENST00000411292 86 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 AL365184.2-201ENST00000431139 435 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 USP9YP12-201ENST00000450481 570 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 HSFY5P-201ENST00000453726 309 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 MTCO2P18-201ENST00000457151 658 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 MIR4775-201ENST00000581168 75 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 SNORD11B-201ENST00000607707 90 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 AC027807.2-201ENST00000616099 408 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 AC137590.2-201ENST00000619709 240 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 ZNF204P-201ENST00000416749 2397 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 SNORD114-31-201ENST00000363219 75 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 MIR1185-1-201ENST00000408598 86 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 PDCL2P1-201ENST00000419302 352 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 AC073261.1-201ENST00000429409 121 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 AC104850.1-201ENST00000435940 476 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 ELOCP24-201ENST00000456370 334 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 RNU6-758P-201ENST00000516292 89 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 SCARNA1-201ENST00000517138 166 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 AC090572.1-201ENST00000519251 160 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 AC022878.1-201ENST00000530684 149 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 EIF1P4-201ENST00000572664 335 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 BNIP3P39-201ENST00000601077 554 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 AP000811.1-201ENST00000603803 651 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 AC104695.3-201ENST00000604052 296 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 AC240442.1-201ENST00000616055 283 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 uc_338.22-201ENST00000622722 187 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 SCARNA4-201ENST00000629045 128 ntBASIC-0.06□□□□□ -2.42
RFX7Q2KHR2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.07□□□□□ -2.42
RFX7Q2KHR2 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.07□□□□□ -2.42
RFX7Q2KHR2 RNU6V-201ENST00000384105 107 ntBASIC-0.07□□□□□ -2.42
RFX7Q2KHR2 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.07□□□□□ -2.42
RFX7Q2KHR2 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
RFX7Q2KHR2 MIR1185-2-201ENST00000408687 86 ntBASIC-0.07□□□□□ -2.42
RFX7Q2KHR2 USP9YP29-201ENST00000445112 563 ntBASIC-0.07□□□□□ -2.42
RFX7Q2KHR2 SCARNA18-201ENST00000459004 134 ntBASIC-0.07□□□□□ -2.42
RFX7Q2KHR2 snoU13.19-201ENST00000459148 104 ntBASIC-0.07□□□□□ -2.42
RFX7Q2KHR2 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.07□□□□□ -2.42
RFX7Q2KHR2 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
RFX7Q2KHR2 AP003716.2-201ENST00000528260 108 ntBASIC-0.07□□□□□ -2.42
RFX7Q2KHR2 AC093027.1-201ENST00000546698 429 ntBASIC-0.07□□□□□ -2.42
RFX7Q2KHR2 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.07□□□□□ -2.42
RFX7Q2KHR2 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.07□□□□□ -2.42
RFX7Q2KHR2 AC090517.2-201ENST00000614966 680 ntBASIC-0.07□□□□□ -2.42
RFX7Q2KHR2 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.07□□□□□ -2.42
RFX7Q2KHR2 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.08□□□□□ -2.42
RFX7Q2KHR2 SNORA8.3-201ENST00000384679 139 ntBASIC-0.08□□□□□ -2.42
RFX7Q2KHR2 MIR526A1-201ENST00000384897 85 ntBASIC-0.08□□□□□ -2.42
RFX7Q2KHR2 MIR573-201ENST00000384964 99 ntBASIC-0.08□□□□□ -2.42
RFX7Q2KHR2 MIR520C-201ENST00000385005 87 ntBASIC-0.08□□□□□ -2.42
RFX7Q2KHR2 MTND3P9-201ENST00000429526 346 ntBASIC-0.08□□□□□ -2.42
RFX7Q2KHR2 GPR143P-201ENST00000434155 205 ntBASIC-0.08□□□□□ -2.42
RFX7Q2KHR2 AC084290.1-201ENST00000434995 374 ntBASIC-0.08□□□□□ -2.42
RFX7Q2KHR2 RPS29P15-201ENST00000458329 171 ntBASIC-0.08□□□□□ -2.42
RFX7Q2KHR2 AC091133.4-201ENST00000511142 308 ntBASIC-0.08□□□□□ -2.42
RFX7Q2KHR2 RPL39P5-202ENST00000512505 151 ntBASIC-0.08□□□□□ -2.42
RFX7Q2KHR2 AP001372.4-201ENST00000524889 472 ntBASIC-0.08□□□□□ -2.42
RFX7Q2KHR2 AC104383.1-201ENST00000530297 370 ntBASIC-0.08□□□□□ -2.42
RFX7Q2KHR2 AP002004.2-201ENST00000531656 154 ntBASIC-0.08□□□□□ -2.42
RFX7Q2KHR2 MRPS36P4-201ENST00000534436 298 ntBASIC-0.08□□□□□ -2.42
RFX7Q2KHR2 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.08□□□□□ -2.42
RFX7Q2KHR2 FRG2DP-202ENST00000566967 323 ntBASIC-0.08□□□□□ -2.42
RFX7Q2KHR2 AGGF1P4-201ENST00000568249 801 ntBASIC-0.08□□□□□ -2.42
RFX7Q2KHR2 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.08□□□□□ -2.42
RFX7Q2KHR2 AC006927.3-201ENST00000638789 384 ntBASIC-0.08□□□□□ -2.42
RFX7Q2KHR2 MIR18A-201ENST00000362310 71 ntBASIC-0.09□□□□□ -2.42
RFX7Q2KHR2 RNU6-302P-201ENST00000365249 107 ntBASIC-0.09□□□□□ -2.42
RFX7Q2KHR2 RNU6-83P-201ENST00000384568 112 ntBASIC-0.09□□□□□ -2.42
RFX7Q2KHR2 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.09□□□□□ -2.42
RFX7Q2KHR2 SNORA2B-201ENST00000384583 137 ntBASIC-0.09□□□□□ -2.42
RFX7Q2KHR2 MIR518A1-201ENST00000385068 85 ntBASIC-0.09□□□□□ -2.42
RFX7Q2KHR2 RNU6-679P-201ENST00000391003 106 ntBASIC-0.09□□□□□ -2.42
RFX7Q2KHR2 MTND2P9-201ENST00000422293 931 ntBASIC-0.09□□□□□ -2.42
RFX7Q2KHR2 AL512286.1-201ENST00000439244 400 ntBASIC-0.09□□□□□ -2.42
RFX7Q2KHR2 U8.21-201ENST00000459536 136 ntBASIC-0.09□□□□□ -2.42
RFX7Q2KHR2 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.09□□□□□ -2.42
RFX7Q2KHR2 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.09□□□□□ -2.42
RFX7Q2KHR2 RNA5SP227-201ENST00000516184 113 ntBASIC-0.09□□□□□ -2.42
RFX7Q2KHR2 MTND2P32-201ENST00000521584 1038 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 204.6 ms