Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 MRPS18CP6-201ENST00000423587 223 ntBASIC1.88□□□□□ -2.11
CHMP24386 AL445646.1-201ENST00000431784 216 ntBASIC1.88□□□□□ -2.11
CHMP24386 AC073910.1-201ENST00000445047 438 ntBASIC1.88□□□□□ -2.11
CHMP24386 FGF7P4-201ENST00000509595 295 ntBASIC1.88□□□□□ -2.11
CHMP24386 RNU1-142P-201ENST00000516682 145 ntBASIC1.88□□□□□ -2.11
CHMP24386 MIR2355-201ENST00000517199 87 ntBASIC1.88□□□□□ -2.11
CHMP24386 AC144568.1-201ENST00000520139 137 ntBASIC1.88□□□□□ -2.11
CHMP24386 AC024995.1-201ENST00000523014 93 ntBASIC1.88□□□□□ -2.11
CHMP24386 AC018448.1-201ENST00000552843 316 ntBASIC1.88□□□□□ -2.11
CHMP24386 MIR8074-201ENST00000615081 81 ntBASIC1.88□□□□□ -2.11
CHMP24386 Y_RNA.804-201ENST00000615262 101 ntBASIC1.88□□□□□ -2.11
CHMP24386 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.88□□□□□ -2.11
CHMP24386 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CHMP24386 MIR424-201ENST00000362227 98 ntBASIC1.87□□□□□ -2.11
CHMP24386 RNY3P11-201ENST00000364153 102 ntBASIC1.87□□□□□ -2.11
CHMP24386 SNORA67.3-201ENST00000384366 140 ntBASIC1.87□□□□□ -2.11
CHMP24386 AL079342.1-201ENST00000401460 267 ntBASIC1.87□□□□□ -2.11
CHMP24386 AL023284.1-201ENST00000403956 276 ntBASIC1.87□□□□□ -2.11
CHMP24386 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.87□□□□□ -2.11
CHMP24386 SNORD12B-201ENST00000410433 91 ntBASIC1.87□□□□□ -2.11
CHMP24386 MTND4P28-201ENST00000426217 387 ntBASIC1.87□□□□□ -2.11
CHMP24386 RNU6-625P-201ENST00000459412 107 ntBASIC1.87□□□□□ -2.11
CHMP24386 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.87□□□□□ -2.11
CHMP24386 AC074133.1-201ENST00000515696 183 ntBASIC1.87□□□□□ -2.11
CHMP24386 SNORA40.9-201ENST00000515895 93 ntBASIC1.87□□□□□ -2.11
CHMP24386 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CHMP24386 AC093027.1-201ENST00000546698 429 ntBASIC1.87□□□□□ -2.11
CHMP24386 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.87□□□□□ -2.11
CHMP24386 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
CHMP24386 AC019129.1-201ENST00000403786 261 ntBASIC1.86□□□□□ -2.11
CHMP24386 MIR1267-201ENST00000408723 78 ntBASIC1.86□□□□□ -2.11
CHMP24386 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.86□□□□□ -2.11
CHMP24386 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.86□□□□□ -2.11
CHMP24386 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.86□□□□□ -2.11
CHMP24386 SNORD65B-201ENST00000459126 73 ntBASIC1.86□□□□□ -2.11
CHMP24386 RN7SL274P-201ENST00000492268 272 ntBASIC1.86□□□□□ -2.11
CHMP24386 AL163195.1-201ENST00000496941 348 ntBASIC1.86□□□□□ -2.11
CHMP24386 AC008834.1-201ENST00000511612 175 ntBASIC1.86□□□□□ -2.11
CHMP24386 MIR3198-2-201ENST00000577868 80 ntBASIC1.86□□□□□ -2.11
CHMP24386 AC112487.2-201ENST00000637950 304 ntBASIC1.86□□□□□ -2.11
CHMP24386 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CHMP24386 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.85□□□□□ -2.11
CHMP24386 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CHMP24386 RNU6-490P-201ENST00000362985 107 ntBASIC1.85□□□□□ -2.11
CHMP24386 RNU6-1040P-201ENST00000383974 107 ntBASIC1.85□□□□□ -2.11
CHMP24386 MIR559-201ENST00000385188 96 ntBASIC1.85□□□□□ -2.11
CHMP24386 RNU6-360P-201ENST00000390944 104 ntBASIC1.85□□□□□ -2.11
CHMP24386 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.85□□□□□ -2.11
CHMP24386 COX6CP10-201ENST00000416832 224 ntBASIC1.85□□□□□ -2.11
CHMP24386 AC005002.2-201ENST00000438228 269 ntBASIC1.85□□□□□ -2.11
CHMP24386 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.85□□□□□ -2.11
CHMP24386 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.85□□□□□ -2.11
CHMP24386 RPS27P22-201ENST00000478056 241 ntBASIC1.85□□□□□ -2.11
CHMP24386 AC023157.2-201ENST00000540596 141 ntBASIC1.85□□□□□ -2.11
CHMP24386 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.85□□□□□ -2.11
CHMP24386 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.85□□□□□ -2.11
CHMP24386 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
CHMP24386 MTND5P10-201ENST00000603719 1809 ntBASIC1.84□□□□□ -2.11
CHMP24386 SNORA4.2-201ENST00000365313 147 ntBASIC1.84□□□□□ -2.11
CHMP24386 RNU6-926P-201ENST00000384075 107 ntBASIC1.84□□□□□ -2.11
CHMP24386 MIR628-201ENST00000385229 95 ntBASIC1.84□□□□□ -2.11
CHMP24386 RNA5SP109-201ENST00000391010 116 ntBASIC1.84□□□□□ -2.11
CHMP24386 RAB28P5-201ENST00000427490 651 ntBASIC1.84□□□□□ -2.11
CHMP24386 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.84□□□□□ -2.11
CHMP24386 FTH1P12-201ENST00000432137 551 ntBASIC1.84□□□□□ -2.11
CHMP24386 AC099799.1-201ENST00000439809 192 ntBASIC1.84□□□□□ -2.11
CHMP24386 snoU13.27-201ENST00000459278 104 ntBASIC1.84□□□□□ -2.11
CHMP24386 SNORD19B-201ENST00000459623 84 ntBASIC1.84□□□□□ -2.11
CHMP24386 AC005908.1-201ENST00000468701 347 ntBASIC1.84□□□□□ -2.11
CHMP24386 RNU6-699P-201ENST00000517081 110 ntBASIC1.84□□□□□ -2.11
CHMP24386 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.84□□□□□ -2.11
CHMP24386 U6.73-201ENST00000619194 103 ntBASIC1.84□□□□□ -2.11
CHMP24386 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.84□□□□□ -2.11
CHMP24386 AC100821.1-201ENST00000523153 2479 ntBASIC1.84□□□□□ -2.12
CHMP24386 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
CHMP24386 Y_RNA.58-201ENST00000362807 102 ntBASIC1.83□□□□□ -2.12
CHMP24386 Y_RNA.154-201ENST00000363624 102 ntBASIC1.83□□□□□ -2.12
CHMP24386 RNY3P1-201ENST00000365085 102 ntBASIC1.83□□□□□ -2.12
CHMP24386 RNY3-201ENST00000365484 102 ntBASIC1.83□□□□□ -2.12
CHMP24386 RNA5SP475-201ENST00000410568 110 ntBASIC1.83□□□□□ -2.12
CHMP24386 AL139156.1-201ENST00000412785 841 ntBASIC1.83□□□□□ -2.12
CHMP24386 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.83□□□□□ -2.12
CHMP24386 AC236972.2-201ENST00000434979 310 ntBASIC1.83□□□□□ -2.12
CHMP24386 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.83□□□□□ -2.12
CHMP24386 AC007677.1-201ENST00000445757 515 ntBASIC1.83□□□□□ -2.12
CHMP24386 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.83□□□□□ -2.12
CHMP24386 RNU7-34P-201ENST00000459394 64 ntBASIC1.83□□□□□ -2.12
CHMP24386 RPL26P26-201ENST00000480251 434 ntBASIC1.83□□□□□ -2.12
CHMP24386 AC010469.2-201ENST00000496412 480 ntBASIC1.83□□□□□ -2.12
CHMP24386 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.83□□□□□ -2.12
CHMP24386 AC010598.1-201ENST00000510378 103 ntBASIC1.83□□□□□ -2.12
CHMP24386 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.83□□□□□ -2.12
CHMP24386 RNA5SP182-201ENST00000516064 82 ntBASIC1.83□□□□□ -2.12
CHMP24386 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.83□□□□□ -2.12
CHMP24386 MIR4438-201ENST00000585271 93 ntBASIC1.83□□□□□ -2.12
CHMP24386 AC016925.2-201ENST00000605108 242 ntBASIC1.83□□□□□ -2.12
CHMP24386 MIR3674-201ENST00000636576 68 ntBASIC1.83□□□□□ -2.12
CHMP24386 U6.108-201ENST00000637764 58 ntBASIC1.83□□□□□ -2.12
CHMP24386 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CHMP24386 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms