Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 RNU6-58P-201ENST00000517143 103 ntBASIC0.49□□□□□ -2.33
SOD1P00441 APOOP3-201ENST00000536787 586 ntBASIC0.49□□□□□ -2.33
SOD1P00441 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.49□□□□□ -2.33
SOD1P00441 AC068790.6-201ENST00000602558 258 ntBASIC0.49□□□□□ -2.33
SOD1P00441 AC087752.4-201ENST00000605911 462 ntBASIC0.49□□□□□ -2.33
SOD1P00441 AL121757.2-201ENST00000611223 313 ntBASIC0.49□□□□□ -2.33
SOD1P00441 AL158063.1-201ENST00000615349 536 ntBASIC0.49□□□□□ -2.33
SOD1P00441 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.49□□□□□ -2.33
SOD1P00441 AC091931.1-201ENST00000623488 728 ntBASIC0.49□□□□□ -2.33
SOD1P00441 ELL2P3-201ENST00000457883 1602 ntBASIC0.49□□□□□ -2.33
SOD1P00441 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
SOD1P00441 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
SOD1P00441 MIR605-201ENST00000385078 83 ntBASIC0.48□□□□□ -2.33
SOD1P00441 EIF4E2P1-201ENST00000393781 255 ntBASIC0.48□□□□□ -2.33
SOD1P00441 CALM2P3-201ENST00000400429 449 ntBASIC0.48□□□□□ -2.33
SOD1P00441 AL451046.2-201ENST00000403074 277 ntBASIC0.48□□□□□ -2.33
SOD1P00441 RPS26P5-201ENST00000418544 335 ntBASIC0.48□□□□□ -2.33
SOD1P00441 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.48□□□□□ -2.33
SOD1P00441 MRPS10P2-201ENST00000431226 381 ntBASIC0.48□□□□□ -2.33
SOD1P00441 AL445305.1-201ENST00000432577 575 ntBASIC0.48□□□□□ -2.33
SOD1P00441 USP9YP29-201ENST00000445112 563 ntBASIC0.48□□□□□ -2.33
SOD1P00441 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
SOD1P00441 AC022493.2-201ENST00000506122 481 ntBASIC0.48□□□□□ -2.33
SOD1P00441 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.48□□□□□ -2.33
SOD1P00441 RNU6-1038P-201ENST00000516516 104 ntBASIC0.48□□□□□ -2.33
SOD1P00441 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.48□□□□□ -2.33
SOD1P00441 MIR4778-201ENST00000577635 80 ntBASIC0.48□□□□□ -2.33
SOD1P00441 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.48□□□□□ -2.33
SOD1P00441 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.48□□□□□ -2.33
SOD1P00441 AP001330.5-201ENST00000607176 411 ntBASIC0.48□□□□□ -2.33
SOD1P00441 AC023934.1-201ENST00000574529 2389 ntBASIC0.48□□□□□ -2.33
SOD1P00441 Y_RNA.100-201ENST00000363141 102 ntBASIC0.47□□□□□ -2.33
SOD1P00441 SNORD113-7-201ENST00000363762 77 ntBASIC0.47□□□□□ -2.33
SOD1P00441 SNORD87-201ENST00000364849 89 ntBASIC0.47□□□□□ -2.33
SOD1P00441 RNU4-9P-201ENST00000364951 139 ntBASIC0.47□□□□□ -2.33
SOD1P00441 RNU4-20P-201ENST00000365601 151 ntBASIC0.47□□□□□ -2.33
SOD1P00441 SNORA75-201ENST00000384158 137 ntBASIC0.47□□□□□ -2.33
SOD1P00441 MIR514A2-201ENST00000385131 88 ntBASIC0.47□□□□□ -2.33
SOD1P00441 MIR514A3-201ENST00000385132 88 ntBASIC0.47□□□□□ -2.33
SOD1P00441 RN7SKP142-201ENST00000411236 328 ntBASIC0.47□□□□□ -2.33
SOD1P00441 RPS3AP1-201ENST00000413190 320 ntBASIC0.47□□□□□ -2.33
SOD1P00441 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.47□□□□□ -2.33
SOD1P00441 MTCO2P7-201ENST00000446518 666 ntBASIC0.47□□□□□ -2.33
SOD1P00441 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.47□□□□□ -2.33
SOD1P00441 OR9P1P-201ENST00000496431 281 ntBASIC0.47□□□□□ -2.33
SOD1P00441 SNORA70.12-201ENST00000516084 153 ntBASIC0.47□□□□□ -2.33
SOD1P00441 RNU6-229P-201ENST00000516614 102 ntBASIC0.47□□□□□ -2.33
SOD1P00441 AC007834.2-201ENST00000536310 343 ntBASIC0.47□□□□□ -2.33
SOD1P00441 AC027288.2-201ENST00000553028 243 ntBASIC0.47□□□□□ -2.33
SOD1P00441 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.47□□□□□ -2.33
SOD1P00441 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.47□□□□□ -2.33
SOD1P00441 AC004832.4-201ENST00000608952 331 ntBASIC0.47□□□□□ -2.33
SOD1P00441 AC092807.2-201ENST00000609367 243 ntBASIC0.47□□□□□ -2.33
SOD1P00441 AL158209.2-201ENST00000619266 216 ntBASIC0.47□□□□□ -2.33
SOD1P00441 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
SOD1P00441 MTND4P12-201ENST00000498999 1377 ntBASIC0.46□□□□□ -2.34
SOD1P00441 CASC19-280ENST00000642102 1351 ntBASIC0.46□□□□□ -2.34
SOD1P00441 Y_RNA.1-201ENST00000352915 104 ntBASIC0.46□□□□□ -2.34
SOD1P00441 RNA5SP361-201ENST00000362686 118 ntBASIC0.46□□□□□ -2.34
SOD1P00441 Y_RNA.540-201ENST00000384638 111 ntBASIC0.46□□□□□ -2.34
SOD1P00441 AL355796.1-201ENST00000406706 323 ntBASIC0.46□□□□□ -2.34
SOD1P00441 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.46□□□□□ -2.34
SOD1P00441 STAG3L5P-204ENST00000443759 179 ntBASIC0.46□□□□□ -2.34
SOD1P00441 MRPS10P1-201ENST00000448483 130 ntBASIC0.46□□□□□ -2.34
SOD1P00441 TPT1P7-201ENST00000458300 517 ntBASIC0.46□□□□□ -2.34
SOD1P00441 SNORD65B-201ENST00000459126 73 ntBASIC0.46□□□□□ -2.34
SOD1P00441 RNU6-261P-201ENST00000459506 102 ntBASIC0.46□□□□□ -2.34
SOD1P00441 AC083798.1-201ENST00000472671 131 ntBASIC0.46□□□□□ -2.34
SOD1P00441 RPS27P22-201ENST00000478056 241 ntBASIC0.46□□□□□ -2.34
SOD1P00441 RNU6-496P-201ENST00000516145 99 ntBASIC0.46□□□□□ -2.34
SOD1P00441 SNORA25.14-201ENST00000516481 132 ntBASIC0.46□□□□□ -2.34
SOD1P00441 RNU7-28P-201ENST00000516759 62 ntBASIC0.46□□□□□ -2.34
SOD1P00441 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.46□□□□□ -2.34
SOD1P00441 AC104383.1-201ENST00000530297 370 ntBASIC0.46□□□□□ -2.34
SOD1P00441 MTATP6P24-201ENST00000576835 677 ntBASIC0.46□□□□□ -2.34
SOD1P00441 MIR4438-201ENST00000585271 93 ntBASIC0.46□□□□□ -2.34
SOD1P00441 AC007684.1-201ENST00000609671 477 ntBASIC0.46□□□□□ -2.34
SOD1P00441 uc_338.17-201ENST00000619633 179 ntBASIC0.46□□□□□ -2.34
SOD1P00441 AC073534.2-201ENST00000620377 381 ntBASIC0.46□□□□□ -2.34
SOD1P00441 AC068137.4-201ENST00000638485 296 ntBASIC0.46□□□□□ -2.34
SOD1P00441 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
SOD1P00441 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
SOD1P00441 RNU6-1266P-201ENST00000362794 105 ntBASIC0.45□□□□□ -2.34
SOD1P00441 RNU4-12P-201ENST00000365233 139 ntBASIC0.45□□□□□ -2.34
SOD1P00441 Y_RNA.381-201ENST00000365666 102 ntBASIC0.45□□□□□ -2.34
SOD1P00441 RNU6-933P-201ENST00000384424 107 ntBASIC0.45□□□□□ -2.34
SOD1P00441 RNU6-110P-201ENST00000384508 104 ntBASIC0.45□□□□□ -2.34
SOD1P00441 U8.16-201ENST00000391279 133 ntBASIC0.45□□□□□ -2.34
SOD1P00441 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.45□□□□□ -2.34
SOD1P00441 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.45□□□□□ -2.34
SOD1P00441 CALM2P4-201ENST00000430810 426 ntBASIC0.45□□□□□ -2.34
SOD1P00441 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.45□□□□□ -2.34
SOD1P00441 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.45□□□□□ -2.34
SOD1P00441 RPL39P39-201ENST00000455840 151 ntBASIC0.45□□□□□ -2.34
SOD1P00441 RNU7-90P-201ENST00000459216 62 ntBASIC0.45□□□□□ -2.34
SOD1P00441 RNA5SP401-201ENST00000515920 127 ntBASIC0.45□□□□□ -2.34
SOD1P00441 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.45□□□□□ -2.34
SOD1P00441 AP002001.1-203ENST00000534002 267 ntBASIC0.45□□□□□ -2.34
SOD1P00441 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.45□□□□□ -2.34
SOD1P00441 MTND1P15-201ENST00000579262 949 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms