Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC245102.2-201ENST00000448956 180 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC007395.1-201ENST00000451333 677 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 Y_RNA.635-201ENST00000459041 101 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC091179.3-201ENST00000474761 144 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNU7-175P-201ENST00000515915 61 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNA5SP102-201ENST00000516865 106 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNU6-856P-201ENST00000516959 98 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 AP005660.1-201ENST00000522972 293 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC134698.4-201ENST00000523451 826 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 FRG2DP-202ENST00000566967 323 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC005668.1-201ENST00000571142 476 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 SNRPGP20-201ENST00000604477 205 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC010900.2-201ENST00000604508 210 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC113139.1-201ENST00000605049 239 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC025253.1-201ENST00000613623 543 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC087588.2-201ENST00000617667 426 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 MTND5P16-201ENST00000460269 1703 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
TMX2-CTNND1H3BSU7 Y_RNA.263-201ENST00000364659 114 ntBASIC1.28□□□□□ -2.2
TMX2-CTNND1H3BSU7 SNORD87-201ENST00000364849 89 ntBASIC1.28□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNU6-438P-201ENST00000365561 103 ntBASIC1.28□□□□□ -2.2
TMX2-CTNND1H3BSU7 Y_RNA.557-201ENST00000384680 107 ntBASIC1.28□□□□□ -2.2
TMX2-CTNND1H3BSU7 MIR329-1-201ENST00000385028 80 ntBASIC1.28□□□□□ -2.2
TMX2-CTNND1H3BSU7 MIR548B-201ENST00000385247 97 ntBASIC1.28□□□□□ -2.2
TMX2-CTNND1H3BSU7 SNORA75.6-201ENST00000391318 127 ntBASIC1.28□□□□□ -2.2
TMX2-CTNND1H3BSU7 MIR190B-201ENST00000401119 79 ntBASIC1.28□□□□□ -2.2
TMX2-CTNND1H3BSU7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
TMX2-CTNND1H3BSU7 AL353997.1-201ENST00000432936 108 ntBASIC1.28□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC245517.4-201ENST00000448601 281 ntBASIC1.28□□□□□ -2.2
TMX2-CTNND1H3BSU7 MTND5P20-201ENST00000448677 143 ntBASIC1.28□□□□□ -2.2
TMX2-CTNND1H3BSU7 ELOCP24-201ENST00000456370 334 ntBASIC1.28□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNU7-152P-201ENST00000458982 64 ntBASIC1.28□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.28□□□□□ -2.2
TMX2-CTNND1H3BSU7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.28□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.28□□□□□ -2.2
TMX2-CTNND1H3BSU7 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
TMX2-CTNND1H3BSU7 MZT1P2-201ENST00000604387 248 ntBASIC1.28□□□□□ -2.2
TMX2-CTNND1H3BSU7 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.28□□□□□ -2.2
TMX2-CTNND1H3BSU7 MTND4LP32-201ENST00000636111 270 ntBASIC1.28□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNU6-23P-201ENST00000363283 107 ntBASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-890P-201ENST00000384121 107 ntBASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-1145P-201ENST00000384246 107 ntBASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-318P-201ENST00000384283 103 ntBASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 MIR559-201ENST00000385188 96 ntBASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 SNORA40.6-201ENST00000391153 128 ntBASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC009310.1-201ENST00000414414 451 ntBASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 NCOR1P3-201ENST00000420479 303 ntBASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC010409.1-201ENST00000487382 476 ntBASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 RPL17P19-201ENST00000489069 552 ntBASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC093303.1-201ENST00000514549 295 ntBASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 SNORA25.14-201ENST00000516481 132 ntBASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-1198P-201ENST00000516904 67 ntBASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 Y_RNA.718-201ENST00000517110 102 ntBASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC093027.1-201ENST00000546698 429 ntBASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 AP001094.1-201ENST00000579805 193 ntBASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 AL357075.2-201ENST00000614906 189 ntBASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC084781.2-201ENST00000615568 161 ntBASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC112487.2-201ENST00000637950 304 ntBASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
TMX2-CTNND1H3BSU7 Y_RNA.70-201ENST00000362886 110 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-1305P-201ENST00000364353 104 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-99P-201ENST00000364721 107 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 Y_RNA.364-201ENST00000365532 101 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 Y_RNA.415-201ENST00000384012 112 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-42P-201ENST00000384165 107 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-1235P-201ENST00000384559 107 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-296P-201ENST00000384608 107 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 ELOCP21-201ENST00000412558 336 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC245047.4-201ENST00000433189 144 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC112492.4-201ENST00000456549 352 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU1-98P-201ENST00000458992 160 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-498P-201ENST00000459468 107 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 RPL36AP21-201ENST00000490372 323 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-1114P-201ENST00000516022 107 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-559P-201ENST00000516151 98 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNA5SP220-201ENST00000516298 104 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 Y_RNA.702-201ENST00000516843 96 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC090821.2-201ENST00000523552 176 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC084364.2-201ENST00000546924 395 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 AL355375.2-201ENST00000574825 175 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 MIR3660-201ENST00000584845 100 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC005786.1-201ENST00000588553 154 ntBASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.26□□□□□ -2.21
TMX2-CTNND1H3BSU7 AL117336.2-201ENST00000602435 335 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 186.5 ms