Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.52□□□□□ -2.17
ATG4BQ9Y4P1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.52□□□□□ -2.17
ATG4BQ9Y4P1 Y_RNA.635-201ENST00000459041 101 ntBASIC1.52□□□□□ -2.17
ATG4BQ9Y4P1 HMGN1P13-201ENST00000505795 138 ntBASIC1.52□□□□□ -2.17
ATG4BQ9Y4P1 RNU6-107P-201ENST00000516643 102 ntBASIC1.52□□□□□ -2.17
ATG4BQ9Y4P1 MZT1P2-201ENST00000604387 248 ntBASIC1.52□□□□□ -2.17
ATG4BQ9Y4P1 AC016727.1-205ENST00000605437 569 ntBASIC1.52□□□□□ -2.17
ATG4BQ9Y4P1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.52□□□□□ -2.17
ATG4BQ9Y4P1 AC010999.1-201ENST00000611856 324 ntBASIC1.52□□□□□ -2.17
ATG4BQ9Y4P1 snoU2-30.2-201ENST00000362805 70 ntBASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 RNU4-42P-201ENST00000364738 142 ntBASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 RNU6-338P-201ENST00000383888 105 ntBASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 Y_RNA.390-201ENST00000383932 102 ntBASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 RNU6-417P-201ENST00000384712 107 ntBASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 SNORA17.3-201ENST00000391159 129 ntBASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 MIR190B-201ENST00000401119 79 ntBASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 RNU6-370P-201ENST00000411008 104 ntBASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 NDUFB4P10-201ENST00000452541 359 ntBASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 RPL26P26-201ENST00000480251 434 ntBASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 RNU6-1114P-201ENST00000516022 107 ntBASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 AC093023.1-201ENST00000547375 507 ntBASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 MIR5701-3-201ENST00000578890 82 ntBASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 MIR4285-201ENST00000581001 85 ntBASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 MIR5701-1-201ENST00000585138 82 ntBASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 MIR5701-2-201ENST00000615634 82 ntBASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 AC022306.2-201ENST00000617563 647 ntBASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 MIR338-201ENST00000636369 67 ntBASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 AL669831.3-213ENST00000636676 183 ntBASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 AC099654.14-201ENST00000638599 341 ntBASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
ATG4BQ9Y4P1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
ATG4BQ9Y4P1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.5□□□□□ -2.17
ATG4BQ9Y4P1 MIR424-201ENST00000362227 98 ntBASIC1.5□□□□□ -2.17
ATG4BQ9Y4P1 RNU6-414P-201ENST00000363705 104 ntBASIC1.5□□□□□ -2.17
ATG4BQ9Y4P1 RNU6-457P-201ENST00000363999 107 ntBASIC1.5□□□□□ -2.17
ATG4BQ9Y4P1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
ATG4BQ9Y4P1 AC138393.2-201ENST00000414742 246 ntBASIC1.5□□□□□ -2.17
ATG4BQ9Y4P1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.5□□□□□ -2.17
ATG4BQ9Y4P1 MTCYBP10-201ENST00000424905 650 ntBASIC1.5□□□□□ -2.17
ATG4BQ9Y4P1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.5□□□□□ -2.17
ATG4BQ9Y4P1 RPL36AP21-201ENST00000490372 323 ntBASIC1.5□□□□□ -2.17
ATG4BQ9Y4P1 HMGN1P12-201ENST00000499125 195 ntBASIC1.5□□□□□ -2.17
ATG4BQ9Y4P1 RNA5SP458-201ENST00000516188 119 ntBASIC1.5□□□□□ -2.17
ATG4BQ9Y4P1 Y_RNA.691-201ENST00000516611 103 ntBASIC1.5□□□□□ -2.17
ATG4BQ9Y4P1 RNU6-307P-201ENST00000516743 106 ntBASIC1.5□□□□□ -2.17
ATG4BQ9Y4P1 SNORA20.3-201ENST00000516880 132 ntBASIC1.5□□□□□ -2.17
ATG4BQ9Y4P1 AC084364.2-201ENST00000546924 395 ntBASIC1.5□□□□□ -2.17
ATG4BQ9Y4P1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.5□□□□□ -2.17
ATG4BQ9Y4P1 MIR4422-201ENST00000581938 83 ntBASIC1.5□□□□□ -2.17
ATG4BQ9Y4P1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.5□□□□□ -2.17
ATG4BQ9Y4P1 AC016925.2-201ENST00000605108 242 ntBASIC1.5□□□□□ -2.17
ATG4BQ9Y4P1 MTND5P35-201ENST00000557537 1720 ntBASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 RNU6-874P-201ENST00000362390 105 ntBASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 SNORA33-201ENST00000363664 130 ntBASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 SNORA67.5-201ENST00000391036 107 ntBASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 RNU6-1001P-201ENST00000411265 100 ntBASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 AC008134.1-201ENST00000420943 193 ntBASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 AL603825.1-201ENST00000438481 80 ntBASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 JTBP1-201ENST00000441314 247 ntBASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 Y_RNA.638-201ENST00000459374 113 ntBASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 RNU6-221P-201ENST00000459541 99 ntBASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 AC116353.2-201ENST00000505332 712 ntBASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 AC093303.1-201ENST00000514549 295 ntBASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 Y_RNA.683-201ENST00000516508 93 ntBASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 AK6P2-201ENST00000549020 471 ntBASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 AL121579.1-201ENST00000555129 305 ntBASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 AC004584.2-201ENST00000570407 410 ntBASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 AC005730.3-201ENST00000583067 366 ntBASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 AC005899.2-201ENST00000584353 90 ntBASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 AP000942.3-201ENST00000603702 160 ntBASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 AC092794.2-201ENST00000620933 563 ntBASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.49□□□□□ -2.17
ATG4BQ9Y4P1 Y_RNA.140-201ENST00000363474 103 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 U3.8-201ENST00000363675 217 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 RNU6-879P-201ENST00000364328 108 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 RNU6-1283P-201ENST00000365314 105 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 Y_RNA.358-201ENST00000365491 99 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 Y_RNA.364-201ENST00000365532 101 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 RNU6-281P-201ENST00000384212 103 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 RNU6-997P-201ENST00000384725 107 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 RNA5SP323-201ENST00000391094 133 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 RNU1-139P-201ENST00000391307 165 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 AC016909.1-201ENST00000415916 166 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 AC108667.1-201ENST00000428618 249 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 HSPE1P9-201ENST00000440046 311 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 snoU13.9-201ENST00000458927 103 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 RNU6-120P-201ENST00000516077 103 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 RNA5SP437-201ENST00000517249 129 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 AC025647.1-201ENST00000517879 253 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 AC105029.1-201ENST00000520250 669 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 AC024995.1-201ENST00000523014 93 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 200.3 ms