Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.18□□□□□ -2.06
SMARCAL1Q9NZC9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.18□□□□□ -2.06
SMARCAL1Q9NZC9 RN7SL853P-201ENST00000617250 223 ntBASIC2.18□□□□□ -2.06
SMARCAL1Q9NZC9 MIR6132-201ENST00000622083 109 ntBASIC2.18□□□□□ -2.06
SMARCAL1Q9NZC9 MIR6873-201ENST00000622788 63 ntBASIC2.18□□□□□ -2.06
SMARCAL1Q9NZC9 AC130454.1-201ENST00000622948 401 ntBASIC2.18□□□□□ -2.06
SMARCAL1Q9NZC9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.18□□□□□ -2.06
SMARCAL1Q9NZC9 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SMARCAL1Q9NZC9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SMARCAL1Q9NZC9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SMARCAL1Q9NZC9 RNU6-743P-201ENST00000364151 106 ntBASIC2.17□□□□□ -2.06
SMARCAL1Q9NZC9 Y_RNA.276-201ENST00000364732 109 ntBASIC2.17□□□□□ -2.06
SMARCAL1Q9NZC9 MIR95-201ENST00000385072 81 ntBASIC2.17□□□□□ -2.06
SMARCAL1Q9NZC9 RNA5SP504-201ENST00000410676 117 ntBASIC2.17□□□□□ -2.06
SMARCAL1Q9NZC9 RNU2-32P-201ENST00000411193 191 ntBASIC2.17□□□□□ -2.06
SMARCAL1Q9NZC9 ELOCP21-201ENST00000412558 336 ntBASIC2.17□□□□□ -2.06
SMARCAL1Q9NZC9 RPL21P38-201ENST00000418090 167 ntBASIC2.17□□□□□ -2.06
SMARCAL1Q9NZC9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.17□□□□□ -2.06
SMARCAL1Q9NZC9 AL731563.1-201ENST00000442202 214 ntBASIC2.17□□□□□ -2.06
SMARCAL1Q9NZC9 AC009237.7-201ENST00000447357 229 ntBASIC2.17□□□□□ -2.06
SMARCAL1Q9NZC9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.17□□□□□ -2.06
SMARCAL1Q9NZC9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.17□□□□□ -2.06
SMARCAL1Q9NZC9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.17□□□□□ -2.06
SMARCAL1Q9NZC9 RPS23P5-201ENST00000495419 428 ntBASIC2.17□□□□□ -2.06
SMARCAL1Q9NZC9 RNA5SP200-201ENST00000516360 103 ntBASIC2.17□□□□□ -2.06
SMARCAL1Q9NZC9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.17□□□□□ -2.06
SMARCAL1Q9NZC9 MIR4448-201ENST00000584360 86 ntBASIC2.17□□□□□ -2.06
SMARCAL1Q9NZC9 AL355297.2-201ENST00000604792 129 ntBASIC2.17□□□□□ -2.06
SMARCAL1Q9NZC9 MIR1248-201ENST00000629190 106 ntBASIC2.17□□□□□ -2.06
SMARCAL1Q9NZC9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SMARCAL1Q9NZC9 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 RNU6-545P-201ENST00000362681 104 ntBASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 RNU6-626P-201ENST00000363354 107 ntBASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 RNU5F-3P-201ENST00000363767 117 ntBASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 RNA5SP126-201ENST00000365092 109 ntBASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 RNU6-234P-201ENST00000365229 104 ntBASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 RNU6-546P-201ENST00000383991 107 ntBASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 RNU6-20P-201ENST00000384106 107 ntBASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 MIR215-201ENST00000384858 110 ntBASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 AL023284.1-201ENST00000403956 276 ntBASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 RN7SKP284-201ENST00000411002 343 ntBASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 AC003685.2-201ENST00000422795 395 ntBASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 CBX3P6-201ENST00000430257 527 ntBASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 RNU7-14P-201ENST00000459331 62 ntBASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 ATP5EP1-201ENST00000510257 156 ntBASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 RNU1-40P-201ENST00000516816 164 ntBASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 RNU1-97P-201ENST00000516872 164 ntBASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 AP003733.2-201ENST00000529409 171 ntBASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 AC018448.1-201ENST00000552843 316 ntBASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 SNORD11B-201ENST00000607707 90 ntBASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 AC013412.1-201ENST00000610687 192 ntBASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.16□□□□□ -2.06
SMARCAL1Q9NZC9 Y_RNA.396-201ENST00000383949 103 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 SNORA67.2-201ENST00000384300 149 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 RNU6-505P-201ENST00000384427 107 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 Y_RNA.498-201ENST00000384460 102 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 RNU6-713P-201ENST00000384761 107 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 SNORA48.3-201ENST00000391081 134 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 SNORA11.4-201ENST00000408823 129 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 RNU2-63P-201ENST00000410792 194 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 HMGN2P38-201ENST00000423806 265 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 AC005002.2-201ENST00000438228 269 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 CYP2C59P-201ENST00000457790 269 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 RNU6-625P-201ENST00000459412 107 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 RNU6-344P-201ENST00000516635 111 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 RNU6-107P-201ENST00000516643 102 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 RNU6-570P-201ENST00000517051 105 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 AC018630.3-201ENST00000542637 96 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 AK6P2-201ENST00000549020 471 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 AC055872.1-201ENST00000570978 278 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 MIR4300-201ENST00000581016 96 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 MIR3149-201ENST00000584629 83 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 MIR376A1-201ENST00000616574 68 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 AL590808.1-201ENST00000618696 141 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SMARCAL1Q9NZC9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.14□□□□□ -2.07
SMARCAL1Q9NZC9 Y_RNA.193-201ENST00000363979 102 ntBASIC2.14□□□□□ -2.07
SMARCAL1Q9NZC9 RNA5SP240-201ENST00000365355 128 ntBASIC2.14□□□□□ -2.07
SMARCAL1Q9NZC9 RNU4-52P-201ENST00000384209 138 ntBASIC2.14□□□□□ -2.07
SMARCAL1Q9NZC9 MT-TW-201ENST00000387382 68 ntBASIC2.14□□□□□ -2.07
SMARCAL1Q9NZC9 SNORD115-46-201ENST00000390982 71 ntBASIC2.14□□□□□ -2.07
SMARCAL1Q9NZC9 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.14□□□□□ -2.07
SMARCAL1Q9NZC9 RAB28P5-201ENST00000427490 651 ntBASIC2.14□□□□□ -2.07
SMARCAL1Q9NZC9 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.14□□□□□ -2.07
SMARCAL1Q9NZC9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.14□□□□□ -2.07
SMARCAL1Q9NZC9 Y_RNA.713-201ENST00000517013 96 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 216.6 ms