Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 Y_RNA.72-201ENST00000362894 103 ntBASIC1.22□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-873P-201ENST00000363833 107 ntBASIC1.22□□□□□ -2.21
CDC42EP4Q9H3Q1 Y_RNA.224-201ENST00000364308 111 ntBASIC1.22□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-338P-201ENST00000383888 105 ntBASIC1.22□□□□□ -2.21
CDC42EP4Q9H3Q1 Y_RNA.490-201ENST00000384413 102 ntBASIC1.22□□□□□ -2.21
CDC42EP4Q9H3Q1 MIR150-201ENST00000385048 84 ntBASIC1.22□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU6-159P-201ENST00000391080 106 ntBASIC1.22□□□□□ -2.21
CDC42EP4Q9H3Q1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.22□□□□□ -2.21
CDC42EP4Q9H3Q1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.22□□□□□ -2.21
CDC42EP4Q9H3Q1 RNU7-57P-201ENST00000459540 60 ntBASIC1.22□□□□□ -2.21
CDC42EP4Q9H3Q1 AC018710.1-201ENST00000506509 158 ntBASIC1.22□□□□□ -2.21
CDC42EP4Q9H3Q1 SNORA25.14-201ENST00000516481 132 ntBASIC1.22□□□□□ -2.21
CDC42EP4Q9H3Q1 AL590705.4-201ENST00000532209 134 ntBASIC1.22□□□□□ -2.21
CDC42EP4Q9H3Q1 AK6P2-201ENST00000549020 471 ntBASIC1.22□□□□□ -2.21
CDC42EP4Q9H3Q1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.22□□□□□ -2.21
CDC42EP4Q9H3Q1 UBL5P4-201ENST00000562584 236 ntBASIC1.22□□□□□ -2.21
CDC42EP4Q9H3Q1 MIR4273-201ENST00000582824 84 ntBASIC1.22□□□□□ -2.21
CDC42EP4Q9H3Q1 AC069114.2-201ENST00000604699 304 ntBASIC1.22□□□□□ -2.21
CDC42EP4Q9H3Q1 SNORD11B-201ENST00000607707 90 ntBASIC1.22□□□□□ -2.21
CDC42EP4Q9H3Q1 AC092794.1-201ENST00000612734 582 ntBASIC1.22□□□□□ -2.21
CDC42EP4Q9H3Q1 AC126177.8-201ENST00000618339 1015 ntBASIC1.22□□□□□ -2.21
CDC42EP4Q9H3Q1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.22□□□□□ -2.21
CDC42EP4Q9H3Q1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CDC42EP4Q9H3Q1 AL161722.3-201ENST00000605789 2983 ntBASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU1-96P-201ENST00000364163 162 ntBASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 SNORA63D-201ENST00000364359 132 ntBASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU6-1019P-201ENST00000364424 107 ntBASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 Y_RNA.405-201ENST00000383979 100 ntBASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 Y_RNA.451-201ENST00000384200 100 ntBASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 Y_RNA.524-201ENST00000384564 100 ntBASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 Y_RNA.561-201ENST00000384694 100 ntBASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 MIR548F5-201ENST00000408421 86 ntBASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 AC016909.1-201ENST00000415916 166 ntBASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 RPL21P111-201ENST00000418453 477 ntBASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 CST2P1-201ENST00000425770 87 ntBASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 MTCO3P29-201ENST00000432119 779 ntBASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 AL445305.1-201ENST00000432577 575 ntBASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU6-1016P-201ENST00000516689 94 ntBASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 RNA5SP437-201ENST00000517249 129 ntBASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 CBX3P8-201ENST00000532412 525 ntBASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 MIR5701-3-201ENST00000578890 82 ntBASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 MIR5701-1-201ENST00000585138 82 ntBASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 MIR5701-2-201ENST00000615634 82 ntBASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 AL078596.1-201ENST00000624856 447 ntBASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.21□□□□□ -2.22
CDC42EP4Q9H3Q1 AC245060.5-201ENST00000610778 3293 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 Y_RNA.48-201ENST00000362710 103 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 snoU2-30.2-201ENST00000362805 70 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 Y_RNA.796-201ENST00000364268 102 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 Y_RNA.248-201ENST00000364501 109 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 Y_RNA.799-201ENST00000364992 102 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 Y_RNA.473-201ENST00000384333 102 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 MIR10B-201ENST00000385011 110 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 HMGN2P34-201ENST00000437647 269 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 AC245517.4-201ENST00000448601 281 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU6-221P-201ENST00000459541 99 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 AP000870.1-201ENST00000472927 406 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 AC091179.3-201ENST00000474761 144 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 HMGN1P7-201ENST00000491722 313 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU7-175P-201ENST00000515915 61 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 SNORA44.1-201ENST00000517031 108 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU1-117P-201ENST00000517041 158 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 AC025647.1-201ENST00000517879 253 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 AC134698.4-201ENST00000523451 826 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 AC084364.2-201ENST00000546924 395 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 AC011712.1-201ENST00000588959 234 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 MIR6504-201ENST00000613520 61 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 U6atac.1-201ENST00000616025 117 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 AL353770.2-201ENST00000620024 78 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 snoZ196.1-201ENST00000625269 89 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 AC010615.1-201ENST00000594254 1764 ntBASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.2□□□□□ -2.22
CDC42EP4Q9H3Q1 MIR424-201ENST00000362227 98 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 SNORA33-201ENST00000363664 130 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU6-593P-201ENST00000364716 112 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 Y_RNA.279-201ENST00000364763 95 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 Y_RNA.287-201ENST00000364853 94 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU6-541P-201ENST00000384709 110 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 MIR520A-201ENST00000384862 85 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 MIR30A-201ENST00000385092 71 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 MIR548B-201ENST00000385247 97 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 MIR1276-201ENST00000408707 83 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 Y_RNA.594-201ENST00000410373 140 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 RNU6-57P-201ENST00000411348 103 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 AC074085.1-201ENST00000413598 418 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 AL591704.2-201ENST00000421658 181 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 SDAD1P3-201ENST00000427380 333 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 MTND3P23-201ENST00000431980 347 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 RPS3AP52-201ENST00000435639 297 ntBASIC1.19□□□□□ -2.22
CDC42EP4Q9H3Q1 AC074290.1-201ENST00000448883 135 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms