Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.28□□□□□ -2.2
NPAS2Q99743 AF235103.2-201ENST00000525753 346 ntBASIC1.28□□□□□ -2.2
NPAS2Q99743 RAB11AP2-201ENST00000545905 639 ntBASIC1.28□□□□□ -2.2
NPAS2Q99743 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.28□□□□□ -2.2
NPAS2Q99743 MIR4790-201ENST00000577799 79 ntBASIC1.28□□□□□ -2.2
NPAS2Q99743 MIR4742-201ENST00000581069 85 ntBASIC1.28□□□□□ -2.2
NPAS2Q99743 AP003465.2-201ENST00000602571 373 ntBASIC1.28□□□□□ -2.2
NPAS2Q99743 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.28□□□□□ -2.2
NPAS2Q99743 ZNF204P-201ENST00000416749 2397 ntBASIC1.27□□□□□ -2.21
NPAS2Q99743 Y_RNA.48-201ENST00000362710 103 ntBASIC1.27□□□□□ -2.21
NPAS2Q99743 Y_RNA.355-201ENST00000365462 98 ntBASIC1.27□□□□□ -2.21
NPAS2Q99743 Y_RNA.533-201ENST00000384596 114 ntBASIC1.27□□□□□ -2.21
NPAS2Q99743 MIR194-1-201ENST00000384892 85 ntBASIC1.27□□□□□ -2.21
NPAS2Q99743 MIR32-201ENST00000384965 70 ntBASIC1.27□□□□□ -2.21
NPAS2Q99743 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
NPAS2Q99743 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.27□□□□□ -2.21
NPAS2Q99743 USP9YP30-201ENST00000430729 455 ntBASIC1.27□□□□□ -2.21
NPAS2Q99743 AC074290.1-201ENST00000448883 135 ntBASIC1.27□□□□□ -2.21
NPAS2Q99743 AC007215.1-201ENST00000464893 276 ntBASIC1.27□□□□□ -2.21
NPAS2Q99743 RPL30P10-201ENST00000488148 337 ntBASIC1.27□□□□□ -2.21
NPAS2Q99743 RNU6-358P-201ENST00000516564 75 ntBASIC1.27□□□□□ -2.21
NPAS2Q99743 AP003033.1-201ENST00000527244 415 ntBASIC1.27□□□□□ -2.21
NPAS2Q99743 MIR3937-201ENST00000580135 106 ntBASIC1.27□□□□□ -2.21
NPAS2Q99743 AC092794.1-201ENST00000612734 582 ntBASIC1.27□□□□□ -2.21
NPAS2Q99743 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.27□□□□□ -2.21
NPAS2Q99743 AL078604.3-201ENST00000615580 211 ntBASIC1.27□□□□□ -2.21
NPAS2Q99743 SCARNA4-201ENST00000629045 128 ntBASIC1.27□□□□□ -2.21
NPAS2Q99743 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
NPAS2Q99743 MTND4P5-201ENST00000435821 1374 ntBASIC1.26□□□□□ -2.21
NPAS2Q99743 snoU2-30.2-201ENST00000362805 70 ntBASIC1.26□□□□□ -2.21
NPAS2Q99743 Y_RNA.248-201ENST00000364501 109 ntBASIC1.26□□□□□ -2.21
NPAS2Q99743 RNU6-392P-201ENST00000364926 101 ntBASIC1.26□□□□□ -2.21
NPAS2Q99743 RNU6-842P-201ENST00000384269 107 ntBASIC1.26□□□□□ -2.21
NPAS2Q99743 RNU6-1065P-201ENST00000384513 106 ntBASIC1.26□□□□□ -2.21
NPAS2Q99743 MRPL35P1-201ENST00000404272 572 ntBASIC1.26□□□□□ -2.21
NPAS2Q99743 MIR548F5-201ENST00000408421 86 ntBASIC1.26□□□□□ -2.21
NPAS2Q99743 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.26□□□□□ -2.21
NPAS2Q99743 SDAD1P3-201ENST00000427380 333 ntBASIC1.26□□□□□ -2.21
NPAS2Q99743 AC016717.1-201ENST00000448918 286 ntBASIC1.26□□□□□ -2.21
NPAS2Q99743 FGF7P6-202ENST00000451282 293 ntBASIC1.26□□□□□ -2.21
NPAS2Q99743 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.26□□□□□ -2.21
NPAS2Q99743 MTND5P5-201ENST00000503764 376 ntBASIC1.26□□□□□ -2.21
NPAS2Q99743 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.26□□□□□ -2.21
NPAS2Q99743 RNU6-1146P-201ENST00000516282 102 ntBASIC1.26□□□□□ -2.21
NPAS2Q99743 AC090821.2-201ENST00000523552 176 ntBASIC1.26□□□□□ -2.21
NPAS2Q99743 RRN3P3-201ENST00000549207 578 ntBASIC1.26□□□□□ -2.21
NPAS2Q99743 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.26□□□□□ -2.21
NPAS2Q99743 AL157834.3-201ENST00000615543 103 ntBASIC1.26□□□□□ -2.21
NPAS2Q99743 U6atac.1-201ENST00000616025 117 ntBASIC1.26□□□□□ -2.21
NPAS2Q99743 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
NPAS2Q99743 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
NPAS2Q99743 RNU4-9P-201ENST00000364951 139 ntBASIC1.25□□□□□ -2.21
NPAS2Q99743 MIR586-201ENST00000385035 97 ntBASIC1.25□□□□□ -2.21
NPAS2Q99743 COX6CP10-201ENST00000416832 224 ntBASIC1.25□□□□□ -2.21
NPAS2Q99743 AC015922.2-201ENST00000435593 184 ntBASIC1.25□□□□□ -2.21
NPAS2Q99743 AL135790.2-201ENST00000437701 267 ntBASIC1.25□□□□□ -2.21
NPAS2Q99743 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.25□□□□□ -2.21
NPAS2Q99743 AC004223.1-201ENST00000479840 271 ntBASIC1.25□□□□□ -2.21
NPAS2Q99743 RNU1-54P-201ENST00000517181 120 ntBASIC1.25□□□□□ -2.21
NPAS2Q99743 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.25□□□□□ -2.21
NPAS2Q99743 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.25□□□□□ -2.21
NPAS2Q99743 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.25□□□□□ -2.21
NPAS2Q99743 MIR4273-201ENST00000582824 84 ntBASIC1.25□□□□□ -2.21
NPAS2Q99743 SNRPGP20-201ENST00000604477 205 ntBASIC1.25□□□□□ -2.21
NPAS2Q99743 AC137590.2-201ENST00000619709 240 ntBASIC1.25□□□□□ -2.21
NPAS2Q99743 CASC19-280ENST00000642102 1351 ntBASIC1.24□□□□□ -2.21
NPAS2Q99743 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.24□□□□□ -2.21
NPAS2Q99743 RNU6-510P-201ENST00000391239 108 ntBASIC1.24□□□□□ -2.21
NPAS2Q99743 MIR1276-201ENST00000408707 83 ntBASIC1.24□□□□□ -2.21
NPAS2Q99743 MTND3P8-201ENST00000412909 339 ntBASIC1.24□□□□□ -2.21
NPAS2Q99743 AL139396.1-201ENST00000421137 167 ntBASIC1.24□□□□□ -2.21
NPAS2Q99743 RPS3AP52-201ENST00000435639 297 ntBASIC1.24□□□□□ -2.21
NPAS2Q99743 AC073910.1-201ENST00000445047 438 ntBASIC1.24□□□□□ -2.21
NPAS2Q99743 RNU1-123P-201ENST00000458950 160 ntBASIC1.24□□□□□ -2.21
NPAS2Q99743 RNU1-117P-201ENST00000517041 158 ntBASIC1.24□□□□□ -2.21
NPAS2Q99743 AC019176.1-201ENST00000518519 225 ntBASIC1.24□□□□□ -2.21
NPAS2Q99743 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.24□□□□□ -2.21
NPAS2Q99743 AC011712.1-201ENST00000588959 234 ntBASIC1.24□□□□□ -2.21
NPAS2Q99743 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.24□□□□□ -2.21
NPAS2Q99743 AL050343.2-201ENST00000607338 280 ntBASIC1.24□□□□□ -2.21
NPAS2Q99743 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.24□□□□□ -2.21
NPAS2Q99743 AL353770.2-201ENST00000620024 78 ntBASIC1.24□□□□□ -2.21
NPAS2Q99743 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.24□□□□□ -2.21
NPAS2Q99743 MIR26B-201ENST00000362251 77 ntBASIC1.23□□□□□ -2.21
NPAS2Q99743 Y_RNA.116-201ENST00000363292 103 ntBASIC1.23□□□□□ -2.21
NPAS2Q99743 Y_RNA.160-201ENST00000363677 92 ntBASIC1.23□□□□□ -2.21
NPAS2Q99743 Y_RNA.184-201ENST00000363884 108 ntBASIC1.23□□□□□ -2.21
NPAS2Q99743 Y_RNA.224-201ENST00000364308 111 ntBASIC1.23□□□□□ -2.21
NPAS2Q99743 RNU6-53P-201ENST00000365367 106 ntBASIC1.23□□□□□ -2.21
NPAS2Q99743 MIR548K-201ENST00000408406 116 ntBASIC1.23□□□□□ -2.21
NPAS2Q99743 MIR320B2-201ENST00000408479 138 ntBASIC1.23□□□□□ -2.21
NPAS2Q99743 AC243428.1-201ENST00000421099 264 ntBASIC1.23□□□□□ -2.21
NPAS2Q99743 HMGN2P34-201ENST00000437647 269 ntBASIC1.23□□□□□ -2.21
NPAS2Q99743 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.23□□□□□ -2.21
NPAS2Q99743 AC024995.1-201ENST00000523014 93 ntBASIC1.23□□□□□ -2.21
NPAS2Q99743 CBX3P8-201ENST00000532412 525 ntBASIC1.23□□□□□ -2.21
NPAS2Q99743 AC027288.2-201ENST00000553028 243 ntBASIC1.23□□□□□ -2.21
NPAS2Q99743 UBL5P4-201ENST00000562584 236 ntBASIC1.23□□□□□ -2.21
NPAS2Q99743 MIR4709-201ENST00000577272 72 ntBASIC1.23□□□□□ -2.21
NPAS2Q99743 MIR5696-201ENST00000578474 85 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms