Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.55□□□□□ -2
NKX6-1P78426 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.55□□□□□ -2
NKX6-1P78426 RN7SKP43-201ENST00000516173 320 ntBASIC2.55□□□□□ -2
NKX6-1P78426 RNA5SP76-201ENST00000516277 87 ntBASIC2.55□□□□□ -2
NKX6-1P78426 RNU2-12P-201ENST00000517216 168 ntBASIC2.55□□□□□ -2
NKX6-1P78426 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.55□□□□□ -2
NKX6-1P78426 AC107016.2-201ENST00000547968 190 ntBASIC2.55□□□□□ -2
NKX6-1P78426 AC090115.4-201ENST00000609970 188 ntBASIC2.55□□□□□ -2
NKX6-1P78426 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.55□□□□□ -2
NKX6-1P78426 AC096644.4-201ENST00000563417 2912 ntBASIC2.55□□□□□ -2
NKX6-1P78426 RNU6-472P-201ENST00000384299 107 ntBASIC2.54□□□□□ -2
NKX6-1P78426 RNU1-148P-201ENST00000384472 162 ntBASIC2.54□□□□□ -2
NKX6-1P78426 Y_RNA.569-201ENST00000384749 103 ntBASIC2.54□□□□□ -2
NKX6-1P78426 MIR196B-201ENST00000384852 84 ntBASIC2.54□□□□□ -2
NKX6-1P78426 MT-TW-201ENST00000387382 68 ntBASIC2.54□□□□□ -2
NKX6-1P78426 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.54□□□□□ -2
NKX6-1P78426 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.54□□□□□ -2
NKX6-1P78426 AL109933.2-201ENST00000452651 260 ntBASIC2.54□□□□□ -2
NKX6-1P78426 MTND4LP30-201ENST00000454092 297 ntBASIC2.54□□□□□ -2
NKX6-1P78426 HMGB3P17-201ENST00000504195 649 ntBASIC2.54□□□□□ -2
NKX6-1P78426 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.54□□□□□ -2
NKX6-1P78426 AC087441.2-201ENST00000529141 262 ntBASIC2.54□□□□□ -2
NKX6-1P78426 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
NKX6-1P78426 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.53□□□□□ -2
NKX6-1P78426 AL391987.6-201ENST00000305671 199 ntBASIC2.53□□□□□ -2
NKX6-1P78426 Y_RNA.286-201ENST00000364813 102 ntBASIC2.53□□□□□ -2
NKX6-1P78426 RNU6-1240P-201ENST00000365155 104 ntBASIC2.53□□□□□ -2
NKX6-1P78426 Y_RNA.483-201ENST00000384380 101 ntBASIC2.53□□□□□ -2
NKX6-1P78426 RNU6-102P-201ENST00000384485 104 ntBASIC2.53□□□□□ -2
NKX6-1P78426 MIR29C-201ENST00000385231 88 ntBASIC2.53□□□□□ -2
NKX6-1P78426 Y_RNA.618-201ENST00000410949 107 ntBASIC2.53□□□□□ -2
NKX6-1P78426 RPL19P1-201ENST00000411635 428 ntBASIC2.53□□□□□ -2
NKX6-1P78426 AC024067.1-201ENST00000426199 223 ntBASIC2.53□□□□□ -2
NKX6-1P78426 AC087499.2-201ENST00000432861 149 ntBASIC2.53□□□□□ -2
NKX6-1P78426 AC108938.1-201ENST00000451204 136 ntBASIC2.53□□□□□ -2
NKX6-1P78426 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.53□□□□□ -2
NKX6-1P78426 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.53□□□□□ -2
NKX6-1P78426 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.53□□□□□ -2
NKX6-1P78426 AC062037.2-201ENST00000610137 73 ntBASIC2.53□□□□□ -2
NKX6-1P78426 U6.115-201ENST00000636045 103 ntBASIC2.53□□□□□ -2
NKX6-1P78426 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
NKX6-1P78426 AC245060.5-201ENST00000610778 3293 ntBASIC2.53□□□□□ -2
NKX6-1P78426 AC010615.1-201ENST00000594254 1764 ntBASIC2.52□□□□□ -2.01
NKX6-1P78426 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NKX6-1P78426 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
NKX6-1P78426 Y_RNA.243-201ENST00000364481 109 ntBASIC2.52□□□□□ -2.01
NKX6-1P78426 SNORA9.2-201ENST00000365361 133 ntBASIC2.52□□□□□ -2.01
NKX6-1P78426 Y_RNA.383-201ENST00000383855 97 ntBASIC2.52□□□□□ -2.01
NKX6-1P78426 Y_RNA.541-201ENST00000384640 113 ntBASIC2.52□□□□□ -2.01
NKX6-1P78426 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
NKX6-1P78426 MIR1262-201ENST00000408276 93 ntBASIC2.52□□□□□ -2.01
NKX6-1P78426 U3.40-201ENST00000408706 208 ntBASIC2.52□□□□□ -2.01
NKX6-1P78426 RN7SL633P-201ENST00000488974 297 ntBASIC2.52□□□□□ -2.01
NKX6-1P78426 YWHAEP4-201ENST00000505390 198 ntBASIC2.52□□□□□ -2.01
NKX6-1P78426 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.52□□□□□ -2.01
NKX6-1P78426 RNU6-1146P-201ENST00000516282 102 ntBASIC2.52□□□□□ -2.01
NKX6-1P78426 RNU6-1338P-201ENST00000516328 91 ntBASIC2.52□□□□□ -2.01
NKX6-1P78426 RNU6-856P-201ENST00000516959 98 ntBASIC2.52□□□□□ -2.01
NKX6-1P78426 AC025647.1-201ENST00000517879 253 ntBASIC2.52□□□□□ -2.01
NKX6-1P78426 DEFB108E-201ENST00000524692 240 ntBASIC2.52□□□□□ -2.01
NKX6-1P78426 SDR42E1P4-201ENST00000620894 481 ntBASIC2.52□□□□□ -2.01
NKX6-1P78426 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NKX6-1P78426 AL161431.1-201ENST00000618966 4205 ntBASIC2.52□□□□□ -2.01
NKX6-1P78426 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NKX6-1P78426 MIR335-201ENST00000362173 94 ntBASIC2.51□□□□□ -2.01
NKX6-1P78426 RNU6-326P-201ENST00000365480 107 ntBASIC2.51□□□□□ -2.01
NKX6-1P78426 RNU6-514P-201ENST00000384208 107 ntBASIC2.51□□□□□ -2.01
NKX6-1P78426 SNORA40.19-201ENST00000390846 128 ntBASIC2.51□□□□□ -2.01
NKX6-1P78426 RNU6-1248P-201ENST00000391096 64 ntBASIC2.51□□□□□ -2.01
NKX6-1P78426 MIR1253-201ENST00000408273 105 ntBASIC2.51□□□□□ -2.01
NKX6-1P78426 RNU6-1199P-201ENST00000411249 104 ntBASIC2.51□□□□□ -2.01
NKX6-1P78426 AL121890.1-201ENST00000435457 205 ntBASIC2.51□□□□□ -2.01
NKX6-1P78426 RPL23AP3-201ENST00000453844 468 ntBASIC2.51□□□□□ -2.01
NKX6-1P78426 RNU1-131P-201ENST00000458943 161 ntBASIC2.51□□□□□ -2.01
NKX6-1P78426 AC010598.1-201ENST00000510378 103 ntBASIC2.51□□□□□ -2.01
NKX6-1P78426 SNORA70.12-201ENST00000516084 153 ntBASIC2.51□□□□□ -2.01
NKX6-1P78426 Y_RNA.668-201ENST00000516233 93 ntBASIC2.51□□□□□ -2.01
NKX6-1P78426 RNU2-31P-201ENST00000516954 155 ntBASIC2.51□□□□□ -2.01
NKX6-1P78426 AC091544.4-201ENST00000555268 342 ntBASIC2.51□□□□□ -2.01
NKX6-1P78426 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.51□□□□□ -2.01
NKX6-1P78426 AL031274.2-201ENST00000599419 203 ntBASIC2.51□□□□□ -2.01
NKX6-1P78426 AC127459.3-201ENST00000624328 466 ntBASIC2.51□□□□□ -2.01
NKX6-1P78426 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NKX6-1P78426 AC131280.1-202ENST00000624067 4211 ntBASIC2.51□□□□□ -2.01
NKX6-1P78426 AL159152.1-201ENST00000635019 2587 ntBASIC2.51□□□□□ -2.01
NKX6-1P78426 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.5□□□□□ -2.01
NKX6-1P78426 SNORD115-3-201ENST00000363100 82 ntBASIC2.5□□□□□ -2.01
NKX6-1P78426 VTRNA1-1-201ENST00000363120 99 ntBASIC2.5□□□□□ -2.01
NKX6-1P78426 RNU6-271P-201ENST00000363858 105 ntBASIC2.5□□□□□ -2.01
NKX6-1P78426 SNORD115-30-201ENST00000364117 82 ntBASIC2.5□□□□□ -2.01
NKX6-1P78426 SNORD127-201ENST00000458892 86 ntBASIC2.5□□□□□ -2.01
NKX6-1P78426 RNU6-1132P-201ENST00000459214 107 ntBASIC2.5□□□□□ -2.01
NKX6-1P78426 RNA5SP137-201ENST00000516833 135 ntBASIC2.5□□□□□ -2.01
NKX6-1P78426 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.5□□□□□ -2.01
NKX6-1P78426 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.5□□□□□ -2.01
NKX6-1P78426 AC079600.2-201ENST00000550076 130 ntBASIC2.5□□□□□ -2.01
NKX6-1P78426 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.5□□□□□ -2.01
NKX6-1P78426 MTND5P6-201ENST00000422338 1798 ntBASIC2.5□□□□□ -2.01
NKX6-1P78426 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NKX6-1P78426 SNORA25.1-201ENST00000362326 128 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 259.4 ms