Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNU6-498P-201ENST00000459468 107 ntBASIC3.59□□□□□ -1.83
NFKB1P19838 RN7SL594P-201ENST00000470590 287 ntBASIC3.59□□□□□ -1.83
NFKB1P19838 AC104619.4-201ENST00000510773 249 ntBASIC3.59□□□□□ -1.83
NFKB1P19838 RNA5SP112-201ENST00000515937 99 ntBASIC3.59□□□□□ -1.83
NFKB1P19838 RNU6-948P-201ENST00000516374 107 ntBASIC3.59□□□□□ -1.83
NFKB1P19838 AC026333.2-201ENST00000542164 106 ntBASIC3.59□□□□□ -1.83
NFKB1P19838 MIR4765-201ENST00000585007 77 ntBASIC3.59□□□□□ -1.83
NFKB1P19838 AL121890.5-201ENST00000620848 304 ntBASIC3.59□□□□□ -1.83
NFKB1P19838 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
NFKB1P19838 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
NFKB1P19838 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
NFKB1P19838 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
NFKB1P19838 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NFKB1P19838 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
NFKB1P19838 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.58□□□□□ -1.84
NFKB1P19838 PWAR6-201ENST00000552334 4618 ntBASIC3.58□□□□□ -1.84
NFKB1P19838 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.58□□□□□ -1.84
NFKB1P19838 RNU6-880P-201ENST00000384526 107 ntBASIC3.58□□□□□ -1.84
NFKB1P19838 MIR767-201ENST00000390228 109 ntBASIC3.58□□□□□ -1.84
NFKB1P19838 SNORA26-201ENST00000391286 122 ntBASIC3.58□□□□□ -1.84
NFKB1P19838 AC016909.1-201ENST00000415916 166 ntBASIC3.58□□□□□ -1.84
NFKB1P19838 RPL30P4-201ENST00000429309 333 ntBASIC3.58□□□□□ -1.84
NFKB1P19838 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.58□□□□□ -1.84
NFKB1P19838 RPL21P10-201ENST00000463521 490 ntBASIC3.58□□□□□ -1.84
NFKB1P19838 RPL27AP5-201ENST00000469428 449 ntBASIC3.58□□□□□ -1.84
NFKB1P19838 RN7SL330P-201ENST00000469709 307 ntBASIC3.58□□□□□ -1.84
NFKB1P19838 RN7SKP18-201ENST00000516005 275 ntBASIC3.58□□□□□ -1.84
NFKB1P19838 RNU1-95P-201ENST00000516357 160 ntBASIC3.58□□□□□ -1.84
NFKB1P19838 RNU6-781P-201ENST00000516377 101 ntBASIC3.58□□□□□ -1.84
NFKB1P19838 Y_RNA.694-201ENST00000516677 117 ntBASIC3.58□□□□□ -1.84
NFKB1P19838 RNU1-128P-201ENST00000516704 160 ntBASIC3.58□□□□□ -1.84
NFKB1P19838 RNU1-45P-201ENST00000517191 141 ntBASIC3.58□□□□□ -1.84
NFKB1P19838 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.58□□□□□ -1.84
NFKB1P19838 RNVU1-4-201ENST00000612985 164 ntBASIC3.58□□□□□ -1.84
NFKB1P19838 U6.98-201ENST00000637157 84 ntBASIC3.58□□□□□ -1.84
NFKB1P19838 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
NFKB1P19838 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NFKB1P19838 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.58□□□□□ -1.84
NFKB1P19838 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
NFKB1P19838 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
NFKB1P19838 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NFKB1P19838 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NFKB1P19838 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
NFKB1P19838 AC103988.1-201ENST00000566382 2177 ntBASIC3.58□□□□□ -1.84
NFKB1P19838 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NFKB1P19838 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
NFKB1P19838 RNU6-309P-201ENST00000364573 106 ntBASIC3.57□□□□□ -1.84
NFKB1P19838 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.57□□□□□ -1.84
NFKB1P19838 SNORA5A-201ENST00000384111 134 ntBASIC3.57□□□□□ -1.84
NFKB1P19838 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
NFKB1P19838 RNU6ATAC-201ENST00000408749 126 ntBASIC3.57□□□□□ -1.84
NFKB1P19838 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.57□□□□□ -1.84
NFKB1P19838 RPS4XP11-201ENST00000446897 772 ntBASIC3.57□□□□□ -1.84
NFKB1P19838 RPS27P22-201ENST00000478056 241 ntBASIC3.57□□□□□ -1.84
NFKB1P19838 SNORA31.1-201ENST00000515993 133 ntBASIC3.57□□□□□ -1.84
NFKB1P19838 RN7SKP19-201ENST00000516016 252 ntBASIC3.57□□□□□ -1.84
NFKB1P19838 SNORA31.5-201ENST00000516190 133 ntBASIC3.57□□□□□ -1.84
NFKB1P19838 RNU6-126P-201ENST00000516685 103 ntBASIC3.57□□□□□ -1.84
NFKB1P19838 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.57□□□□□ -1.84
NFKB1P19838 U7.8-201ENST00000619968 63 ntBASIC3.57□□□□□ -1.84
NFKB1P19838 AC008555.8-201ENST00000623602 2168 ntBASIC3.57□□□□□ -1.84
NFKB1P19838 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NFKB1P19838 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NFKB1P19838 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.56□□□□□ -1.84
NFKB1P19838 GABRG2-229ENST00000641017 3628 ntBASIC3.56□□□□□ -1.84
NFKB1P19838 Y_RNA.52-201ENST00000362760 96 ntBASIC3.56□□□□□ -1.84
NFKB1P19838 RNU6-508P-201ENST00000363231 103 ntBASIC3.56□□□□□ -1.84
NFKB1P19838 RNU1-22P-201ENST00000363334 158 ntBASIC3.56□□□□□ -1.84
NFKB1P19838 RNU1-105P-201ENST00000363470 161 ntBASIC3.56□□□□□ -1.84
NFKB1P19838 Y_RNA.796-201ENST00000364268 102 ntBASIC3.56□□□□□ -1.84
NFKB1P19838 Y_RNA.799-201ENST00000364992 102 ntBASIC3.56□□□□□ -1.84
NFKB1P19838 Y_RNA.346-201ENST00000365385 112 ntBASIC3.56□□□□□ -1.84
NFKB1P19838 MIR562-201ENST00000384894 95 ntBASIC3.56□□□□□ -1.84
NFKB1P19838 RNA5SP171-201ENST00000391071 115 ntBASIC3.56□□□□□ -1.84
NFKB1P19838 RNA5SP354-201ENST00000391247 136 ntBASIC3.56□□□□□ -1.84
NFKB1P19838 AC063976.3-201ENST00000426849 329 ntBASIC3.56□□□□□ -1.84
NFKB1P19838 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.56□□□□□ -1.84
NFKB1P19838 SNORD105B-201ENST00000458770 79 ntBASIC3.56□□□□□ -1.84
NFKB1P19838 RN7SL542P-201ENST00000467147 294 ntBASIC3.56□□□□□ -1.84
NFKB1P19838 MIR3186-201ENST00000577404 85 ntBASIC3.56□□□□□ -1.84
NFKB1P19838 AC006130.2-201ENST00000586202 326 ntBASIC3.56□□□□□ -1.84
NFKB1P19838 AC039056.2-201ENST00000622261 511 ntBASIC3.56□□□□□ -1.84
NFKB1P19838 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NFKB1P19838 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.56□□□□□ -1.84
NFKB1P19838 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.56□□□□□ -1.84
NFKB1P19838 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NFKB1P19838 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NFKB1P19838 Y_RNA.111-201ENST00000363248 100 ntBASIC3.55□□□□□ -1.84
NFKB1P19838 RNU6-1240P-201ENST00000365155 104 ntBASIC3.55□□□□□ -1.84
NFKB1P19838 RNU6-1138P-201ENST00000365359 106 ntBASIC3.55□□□□□ -1.84
NFKB1P19838 RNU6-418P-201ENST00000384035 107 ntBASIC3.55□□□□□ -1.84
NFKB1P19838 MIR554-201ENST00000384874 96 ntBASIC3.55□□□□□ -1.84
NFKB1P19838 MIR624-201ENST00000385217 97 ntBASIC3.55□□□□□ -1.84
NFKB1P19838 MIR891A-201ENST00000401237 79 ntBASIC3.55□□□□□ -1.84
NFKB1P19838 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.55□□□□□ -1.84
NFKB1P19838 AL031183.1-201ENST00000457667 207 ntBASIC3.55□□□□□ -1.84
NFKB1P19838 RNU2-34P-201ENST00000516534 121 ntBASIC3.55□□□□□ -1.84
NFKB1P19838 AC018630.3-201ENST00000542637 96 ntBASIC3.55□□□□□ -1.84
NFKB1P19838 MIR4662B-201ENST00000579498 81 ntBASIC3.55□□□□□ -1.84
NFKB1P19838 MIR4425-201ENST00000580572 84 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 191.5 ms