Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 ZNF204P-201ENST00000416749 2397 ntBASIC1.33□□□□□ -2.2
TMX2-CTNND1H3BSU7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 Y_RNA.118-201ENST00000363300 101 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 Y_RNA.142-201ENST00000363491 102 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 SNORD116-29-201ENST00000384516 83 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 SNORA8-201ENST00000384574 139 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 MIR150-201ENST00000385048 84 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 AL117342.1-201ENST00000404861 406 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 MIR1283-1-201ENST00000408494 87 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 Y_RNA.646-201ENST00000410980 101 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNA5SP501-201ENST00000410990 112 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC139712.2-201ENST00000424302 339 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 AL445305.1-201ENST00000432577 575 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 MTATP6P23-201ENST00000440153 476 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 AP000870.1-201ENST00000472927 406 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 HMGN2P9-201ENST00000476875 229 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC067942.3-201ENST00000512025 362 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNVU1-2-201ENST00000516326 135 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 SCARNA16.2-201ENST00000516520 172 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 AL590705.4-201ENST00000532209 134 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 RRN3P3-201ENST00000549207 578 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC026470.2-201ENST00000561492 181 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 AL161722.3-201ENST00000605789 2983 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 AL050343.2-201ENST00000607338 280 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC137590.2-201ENST00000619709 240 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 MIR7111-201ENST00000619751 72 ntBASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.32□□□□□ -2.2
TMX2-CTNND1H3BSU7 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNA5SP276-201ENST00000362580 94 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNU6-873P-201ENST00000363833 107 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 Y_RNA.319-201ENST00000365138 92 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNU6-418P-201ENST00000384035 107 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNU6-203P-201ENST00000384038 104 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNU6-281P-201ENST00000384212 103 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 Y_RNA.490-201ENST00000384413 102 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNU6-310P-201ENST00000384655 107 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 MIR153-2-201ENST00000385225 87 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNU11-3P-201ENST00000391111 133 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNA5SP465-201ENST00000391195 109 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNU6-1304P-201ENST00000411374 106 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC060773.1-201ENST00000421698 310 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 MTND3P23-201ENST00000431980 347 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC099677.2-201ENST00000436385 175 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 MTND4P18-201ENST00000447010 465 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 MTCO3P10-201ENST00000455912 772 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 U8.22-201ENST00000459141 133 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNU6-344P-201ENST00000516635 111 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNA5SP54-201ENST00000516951 92 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 MIR5006-201ENST00000583027 110 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC104260.1-201ENST00000616660 539 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC008873.1-201ENST00000625051 138 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 AL669831.3-213ENST00000636676 183 ntBASIC1.31□□□□□ -2.2
TMX2-CTNND1H3BSU7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
TMX2-CTNND1H3BSU7 Y_RNA.2-201ENST00000362330 96 ntBASIC1.3□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNU6-222P-201ENST00000362438 107 ntBASIC1.3□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNY1P16-201ENST00000363063 111 ntBASIC1.3□□□□□ -2.2
TMX2-CTNND1H3BSU7 Y_RNA.106-201ENST00000363189 100 ntBASIC1.3□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNU6-245P-201ENST00000384020 107 ntBASIC1.3□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNU6-975P-201ENST00000384296 105 ntBASIC1.3□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNU6-160P-201ENST00000384591 107 ntBASIC1.3□□□□□ -2.2
TMX2-CTNND1H3BSU7 SNORA48.1-201ENST00000390879 135 ntBASIC1.3□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNU1-139P-201ENST00000391307 165 ntBASIC1.3□□□□□ -2.2
TMX2-CTNND1H3BSU7 USMG5P1-201ENST00000425964 177 ntBASIC1.3□□□□□ -2.2
TMX2-CTNND1H3BSU7 EIF1P2-201ENST00000428233 350 ntBASIC1.3□□□□□ -2.2
TMX2-CTNND1H3BSU7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.3□□□□□ -2.2
TMX2-CTNND1H3BSU7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.3□□□□□ -2.2
TMX2-CTNND1H3BSU7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.3□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC097473.1-201ENST00000508142 408 ntBASIC1.3□□□□□ -2.2
TMX2-CTNND1H3BSU7 SUB1P4-201ENST00000566062 339 ntBASIC1.3□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC022254.1-201ENST00000567857 235 ntBASIC1.3□□□□□ -2.2
TMX2-CTNND1H3BSU7 MIR548S-201ENST00000581352 82 ntBASIC1.3□□□□□ -2.2
TMX2-CTNND1H3BSU7 MIR4452-201ENST00000583004 71 ntBASIC1.3□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC125232.2-201ENST00000592457 143 ntBASIC1.3□□□□□ -2.2
TMX2-CTNND1H3BSU7 LARP7P1-201ENST00000605576 316 ntBASIC1.3□□□□□ -2.2
TMX2-CTNND1H3BSU7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.3□□□□□ -2.2
TMX2-CTNND1H3BSU7 MTND5P35-201ENST00000557537 1720 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 MIR126-201ENST00000362291 85 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 Y_RNA.529-201ENST00000384586 119 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 MIR586-201ENST00000385035 97 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 MIR300-201ENST00000401138 83 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNA5SP100-201ENST00000410903 110 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNA5SP59-201ENST00000410922 110 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 RNU6-370P-201ENST00000411008 104 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC016909.1-201ENST00000415916 166 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 AF228730.4-201ENST00000421457 183 ntBASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.29□□□□□ -2.2
TMX2-CTNND1H3BSU7 AC016717.1-201ENST00000448918 286 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 156.3 ms