Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.06□□□□□ -2.08
LRRC53A6NM62 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.06□□□□□ -2.08
LRRC53A6NM62 AC007485.1-201ENST00000616755 206 ntBASIC2.06□□□□□ -2.08
LRRC53A6NM62 AL162373.1-201ENST00000620433 407 ntBASIC2.06□□□□□ -2.08
LRRC53A6NM62 SDR42E1P4-201ENST00000620894 481 ntBASIC2.06□□□□□ -2.08
LRRC53A6NM62 AC006001.4-201ENST00000622243 395 ntBASIC2.06□□□□□ -2.08
LRRC53A6NM62 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.06□□□□□ -2.08
LRRC53A6NM62 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.06□□□□□ -2.08
LRRC53A6NM62 ZNF702P-202ENST00000434269 1966 ntBASIC2.06□□□□□ -2.08
LRRC53A6NM62 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.06□□□□□ -2.08
LRRC53A6NM62 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.06□□□□□ -2.08
LRRC53A6NM62 MIR449A-201ENST00000362113 91 ntBASIC2.05□□□□□ -2.08
LRRC53A6NM62 Y_RNA.39-201ENST00000362620 98 ntBASIC2.05□□□□□ -2.08
LRRC53A6NM62 RNU1-115P-201ENST00000365329 160 ntBASIC2.05□□□□□ -2.08
LRRC53A6NM62 RNU6-926P-201ENST00000384075 107 ntBASIC2.05□□□□□ -2.08
LRRC53A6NM62 Y_RNA.445-201ENST00000384168 102 ntBASIC2.05□□□□□ -2.08
LRRC53A6NM62 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
LRRC53A6NM62 MIR1185-2-201ENST00000408687 86 ntBASIC2.05□□□□□ -2.08
LRRC53A6NM62 RNA5SP501-201ENST00000410990 112 ntBASIC2.05□□□□□ -2.08
LRRC53A6NM62 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.05□□□□□ -2.08
LRRC53A6NM62 RNU6-221P-201ENST00000459541 99 ntBASIC2.05□□□□□ -2.08
LRRC53A6NM62 SNORA40.9-201ENST00000515895 93 ntBASIC2.05□□□□□ -2.08
LRRC53A6NM62 RNU6-911P-201ENST00000516523 104 ntBASIC2.05□□□□□ -2.08
LRRC53A6NM62 CYCSP23-201ENST00000519781 313 ntBASIC2.05□□□□□ -2.08
LRRC53A6NM62 AC018448.1-201ENST00000552843 316 ntBASIC2.05□□□□□ -2.08
LRRC53A6NM62 VN1R91P-201ENST00000594377 169 ntBASIC2.05□□□□□ -2.08
LRRC53A6NM62 SNORD58B-201ENST00000607313 66 ntBASIC2.05□□□□□ -2.08
LRRC53A6NM62 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.05□□□□□ -2.08
LRRC53A6NM62 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.05□□□□□ -2.08
LRRC53A6NM62 AC008555.8-201ENST00000623602 2168 ntBASIC2.05□□□□□ -2.08
LRRC53A6NM62 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
LRRC53A6NM62 RNY3P4-201ENST00000384428 101 ntBASIC2.04□□□□□ -2.08
LRRC53A6NM62 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.04□□□□□ -2.08
LRRC53A6NM62 RNA5SP425-201ENST00000410336 112 ntBASIC2.04□□□□□ -2.08
LRRC53A6NM62 AC016909.1-201ENST00000415916 166 ntBASIC2.04□□□□□ -2.08
LRRC53A6NM62 PMCHL1-202ENST00000423102 261 ntBASIC2.04□□□□□ -2.08
LRRC53A6NM62 AC007677.1-201ENST00000445757 515 ntBASIC2.04□□□□□ -2.08
LRRC53A6NM62 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.04□□□□□ -2.08
LRRC53A6NM62 ATP5J2P3-201ENST00000451550 258 ntBASIC2.04□□□□□ -2.08
LRRC53A6NM62 UBE2DNL-203ENST00000474922 222 ntBASIC2.04□□□□□ -2.08
LRRC53A6NM62 AC011406.1-201ENST00000512440 370 ntBASIC2.04□□□□□ -2.08
LRRC53A6NM62 RNVU1-2-201ENST00000516326 135 ntBASIC2.04□□□□□ -2.08
LRRC53A6NM62 AC025647.1-201ENST00000517879 253 ntBASIC2.04□□□□□ -2.08
LRRC53A6NM62 MIR5188-201ENST00000583467 113 ntBASIC2.04□□□□□ -2.08
LRRC53A6NM62 AC005786.1-201ENST00000588553 154 ntBASIC2.04□□□□□ -2.08
LRRC53A6NM62 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LRRC53A6NM62 AL606534.2-204ENST00000635008 178 ntBASIC2.04□□□□□ -2.08
LRRC53A6NM62 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.04□□□□□ -2.08
LRRC53A6NM62 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LRRC53A6NM62 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
LRRC53A6NM62 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
LRRC53A6NM62 Y_RNA.498-201ENST00000384460 102 ntBASIC2.03□□□□□ -2.08
LRRC53A6NM62 MTCO2P12-201ENST00000427426 682 ntBASIC2.03□□□□□ -2.08
LRRC53A6NM62 AC099677.2-201ENST00000436385 175 ntBASIC2.03□□□□□ -2.08
LRRC53A6NM62 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.03□□□□□ -2.08
LRRC53A6NM62 MTND2P29-201ENST00000438595 412 ntBASIC2.03□□□□□ -2.08
LRRC53A6NM62 AL353689.1-201ENST00000438895 199 ntBASIC2.03□□□□□ -2.08
LRRC53A6NM62 SNORA59A-201ENST00000459326 152 ntBASIC2.03□□□□□ -2.08
LRRC53A6NM62 AC074133.1-201ENST00000515696 183 ntBASIC2.03□□□□□ -2.08
LRRC53A6NM62 SUMO2P18-201ENST00000518873 252 ntBASIC2.03□□□□□ -2.08
LRRC53A6NM62 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.03□□□□□ -2.08
LRRC53A6NM62 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.03□□□□□ -2.08
LRRC53A6NM62 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.03□□□□□ -2.08
LRRC53A6NM62 uc_338.20-201ENST00000621563 178 ntBASIC2.03□□□□□ -2.08
LRRC53A6NM62 CENPCP1-201ENST00000533085 2578 ntBASIC2.03□□□□□ -2.09
LRRC53A6NM62 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LRRC53A6NM62 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LRRC53A6NM62 RNU6-862P-201ENST00000362804 105 ntBASIC2.02□□□□□ -2.09
LRRC53A6NM62 AL512604.1-201ENST00000404812 257 ntBASIC2.02□□□□□ -2.09
LRRC53A6NM62 MCFD2P1-201ENST00000417812 300 ntBASIC2.02□□□□□ -2.09
LRRC53A6NM62 DPH3P2-201ENST00000422618 250 ntBASIC2.02□□□□□ -2.09
LRRC53A6NM62 MTND4P19-201ENST00000446659 478 ntBASIC2.02□□□□□ -2.09
LRRC53A6NM62 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.02□□□□□ -2.09
LRRC53A6NM62 RNU6-625P-201ENST00000459412 107 ntBASIC2.02□□□□□ -2.09
LRRC53A6NM62 Y_RNA.631-201ENST00000459607 101 ntBASIC2.02□□□□□ -2.09
LRRC53A6NM62 AC010469.2-201ENST00000496412 480 ntBASIC2.02□□□□□ -2.09
LRRC53A6NM62 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.02□□□□□ -2.09
LRRC53A6NM62 YWHAEP4-201ENST00000505390 198 ntBASIC2.02□□□□□ -2.09
LRRC53A6NM62 RN7SKP295-201ENST00000517264 153 ntBASIC2.02□□□□□ -2.09
LRRC53A6NM62 AP002001.1-203ENST00000534002 267 ntBASIC2.02□□□□□ -2.09
LRRC53A6NM62 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.02□□□□□ -2.09
LRRC53A6NM62 AL109918.3-201ENST00000603072 338 ntBASIC2.02□□□□□ -2.09
LRRC53A6NM62 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.02□□□□□ -2.09
LRRC53A6NM62 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.02□□□□□ -2.09
LRRC53A6NM62 AL590808.1-201ENST00000618696 141 ntBASIC2.02□□□□□ -2.09
LRRC53A6NM62 AC064859.1-201ENST00000624741 174 ntBASIC2.02□□□□□ -2.09
LRRC53A6NM62 U6.92-201ENST00000636464 89 ntBASIC2.02□□□□□ -2.09
LRRC53A6NM62 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
LRRC53A6NM62 AL359851.1-201ENST00000569460 4997 ntBASIC2.02□□□□□ -2.09
LRRC53A6NM62 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.01□□□□□ -2.09
LRRC53A6NM62 Y_RNA.27-201ENST00000362540 103 ntBASIC2.01□□□□□ -2.09
LRRC53A6NM62 Y_RNA.128-201ENST00000363391 112 ntBASIC2.01□□□□□ -2.09
LRRC53A6NM62 RNU6-961P-201ENST00000363893 105 ntBASIC2.01□□□□□ -2.09
LRRC53A6NM62 RNU6-1264P-201ENST00000383891 107 ntBASIC2.01□□□□□ -2.09
LRRC53A6NM62 SNORA48.1-201ENST00000390879 135 ntBASIC2.01□□□□□ -2.09
LRRC53A6NM62 AL117342.1-201ENST00000404861 406 ntBASIC2.01□□□□□ -2.09
LRRC53A6NM62 HMGN2P19-201ENST00000425149 265 ntBASIC2.01□□□□□ -2.09
LRRC53A6NM62 RAB28P5-201ENST00000427490 651 ntBASIC2.01□□□□□ -2.09
LRRC53A6NM62 AL160004.2-201ENST00000432935 350 ntBASIC2.01□□□□□ -2.09
LRRC53A6NM62 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms