Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 MIR3126-201ENST00000577443 74 ntBASIC2.75□□□□□ -1.97
PCDHGA3Q9Y5H0 AC004467.1-201ENST00000615678 330 ntBASIC2.75□□□□□ -1.97
PCDHGA3Q9Y5H0 U4.1-201ENST00000620349 87 ntBASIC2.75□□□□□ -1.97
PCDHGA3Q9Y5H0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.75□□□□□ -1.97
PCDHGA3Q9Y5H0 MIR8062-201ENST00000621515 85 ntBASIC2.75□□□□□ -1.97
PCDHGA3Q9Y5H0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.75□□□□□ -1.97
PCDHGA3Q9Y5H0 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.75□□□□□ -1.97
PCDHGA3Q9Y5H0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
PCDHGA3Q9Y5H0 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.74□□□□□ -1.97
PCDHGA3Q9Y5H0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
PCDHGA3Q9Y5H0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.74□□□□□ -1.97
PCDHGA3Q9Y5H0 RNU6-1175P-201ENST00000365200 107 ntBASIC2.74□□□□□ -1.97
PCDHGA3Q9Y5H0 RNU6-937P-201ENST00000384325 106 ntBASIC2.74□□□□□ -1.97
PCDHGA3Q9Y5H0 SNORA40.19-201ENST00000390846 128 ntBASIC2.74□□□□□ -1.97
PCDHGA3Q9Y5H0 AL139095.1-201ENST00000404326 391 ntBASIC2.74□□□□□ -1.97
PCDHGA3Q9Y5H0 MIR1302-6-201ENST00000408466 90 ntBASIC2.74□□□□□ -1.97
PCDHGA3Q9Y5H0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.74□□□□□ -1.97
PCDHGA3Q9Y5H0 AC108938.1-201ENST00000451204 136 ntBASIC2.74□□□□□ -1.97
PCDHGA3Q9Y5H0 AC005042.3-201ENST00000453230 174 ntBASIC2.74□□□□□ -1.97
PCDHGA3Q9Y5H0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.74□□□□□ -1.97
PCDHGA3Q9Y5H0 RNU6-991P-201ENST00000516168 107 ntBASIC2.74□□□□□ -1.97
PCDHGA3Q9Y5H0 RNU7-110P-201ENST00000516891 62 ntBASIC2.74□□□□□ -1.97
PCDHGA3Q9Y5H0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.74□□□□□ -1.97
PCDHGA3Q9Y5H0 AC022441.3-201ENST00000605737 136 ntBASIC2.74□□□□□ -1.97
PCDHGA3Q9Y5H0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PCDHGA3Q9Y5H0 RNU4-90P-201ENST00000362773 141 ntBASIC2.73□□□□□ -1.97
PCDHGA3Q9Y5H0 RNU6-1266P-201ENST00000362794 105 ntBASIC2.73□□□□□ -1.97
PCDHGA3Q9Y5H0 RNU6-1072P-201ENST00000384703 107 ntBASIC2.73□□□□□ -1.97
PCDHGA3Q9Y5H0 RNU6-443P-201ENST00000384780 107 ntBASIC2.73□□□□□ -1.97
PCDHGA3Q9Y5H0 MIR9-1-201ENST00000385198 89 ntBASIC2.73□□□□□ -1.97
PCDHGA3Q9Y5H0 MIR29C-201ENST00000385231 88 ntBASIC2.73□□□□□ -1.97
PCDHGA3Q9Y5H0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.73□□□□□ -1.97
PCDHGA3Q9Y5H0 MTND4LP30-201ENST00000454092 297 ntBASIC2.73□□□□□ -1.97
PCDHGA3Q9Y5H0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.73□□□□□ -1.97
PCDHGA3Q9Y5H0 RNU6-221P-201ENST00000459541 99 ntBASIC2.73□□□□□ -1.97
PCDHGA3Q9Y5H0 AC087441.2-201ENST00000529141 262 ntBASIC2.73□□□□□ -1.97
PCDHGA3Q9Y5H0 MYL12BP1-201ENST00000569826 507 ntBASIC2.73□□□□□ -1.97
PCDHGA3Q9Y5H0 AC136932.1-201ENST00000574771 208 ntBASIC2.73□□□□□ -1.97
PCDHGA3Q9Y5H0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.73□□□□□ -1.97
PCDHGA3Q9Y5H0 AC025754.2-201ENST00000606491 432 ntBASIC2.73□□□□□ -1.97
PCDHGA3Q9Y5H0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHGA3Q9Y5H0 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
PCDHGA3Q9Y5H0 Y_RNA.64-201ENST00000362845 102 ntBASIC2.72□□□□□ -1.97
PCDHGA3Q9Y5H0 SNORD81.1-201ENST00000363064 77 ntBASIC2.72□□□□□ -1.97
PCDHGA3Q9Y5H0 SNORD113-8-201ENST00000363497 74 ntBASIC2.72□□□□□ -1.97
PCDHGA3Q9Y5H0 RNU2-54P-201ENST00000410299 190 ntBASIC2.72□□□□□ -1.97
PCDHGA3Q9Y5H0 SNORA31.15-201ENST00000516771 132 ntBASIC2.72□□□□□ -1.97
PCDHGA3Q9Y5H0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.72□□□□□ -1.97
PCDHGA3Q9Y5H0 PRELID2P1-201ENST00000552837 301 ntBASIC2.72□□□□□ -1.97
PCDHGA3Q9Y5H0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.72□□□□□ -1.97
PCDHGA3Q9Y5H0 AC004817.2-201ENST00000561794 651 ntBASIC2.72□□□□□ -1.97
PCDHGA3Q9Y5H0 MIR3945-201ENST00000581853 98 ntBASIC2.72□□□□□ -1.97
PCDHGA3Q9Y5H0 AC008749.1-201ENST00000597650 306 ntBASIC2.72□□□□□ -1.97
PCDHGA3Q9Y5H0 AL109918.3-201ENST00000603072 338 ntBASIC2.72□□□□□ -1.97
PCDHGA3Q9Y5H0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.72□□□□□ -1.97
PCDHGA3Q9Y5H0 AC006001.4-201ENST00000622243 395 ntBASIC2.72□□□□□ -1.97
PCDHGA3Q9Y5H0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.72□□□□□ -1.97
PCDHGA3Q9Y5H0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
PCDHGA3Q9Y5H0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.71□□□□□ -1.98
PCDHGA3Q9Y5H0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PCDHGA3Q9Y5H0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PCDHGA3Q9Y5H0 RNU1-91P-201ENST00000364746 163 ntBASIC2.71□□□□□ -1.98
PCDHGA3Q9Y5H0 Y_RNA.452-201ENST00000384202 108 ntBASIC2.71□□□□□ -1.98
PCDHGA3Q9Y5H0 Y_RNA.581-201ENST00000391017 97 ntBASIC2.71□□□□□ -1.98
PCDHGA3Q9Y5H0 AC004486.1-201ENST00000546846 233 ntBASIC2.71□□□□□ -1.98
PCDHGA3Q9Y5H0 AC079600.2-201ENST00000550076 130 ntBASIC2.71□□□□□ -1.98
PCDHGA3Q9Y5H0 MIR4446-201ENST00000578505 67 ntBASIC2.71□□□□□ -1.98
PCDHGA3Q9Y5H0 AP000942.4-201ENST00000604811 241 ntBASIC2.71□□□□□ -1.98
PCDHGA3Q9Y5H0 AC013412.1-201ENST00000610687 192 ntBASIC2.71□□□□□ -1.98
PCDHGA3Q9Y5H0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
PCDHGA3Q9Y5H0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PCDHGA3Q9Y5H0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PCDHGA3Q9Y5H0 RNU4-82P-201ENST00000362443 140 ntBASIC2.7□□□□□ -1.98
PCDHGA3Q9Y5H0 RNU6-160P-201ENST00000384591 107 ntBASIC2.7□□□□□ -1.98
PCDHGA3Q9Y5H0 AC009963.1-201ENST00000417265 157 ntBASIC2.7□□□□□ -1.98
PCDHGA3Q9Y5H0 AC024067.1-201ENST00000426199 223 ntBASIC2.7□□□□□ -1.98
PCDHGA3Q9Y5H0 MTCO1P44-201ENST00000441935 243 ntBASIC2.7□□□□□ -1.98
PCDHGA3Q9Y5H0 RNU1-131P-201ENST00000458943 161 ntBASIC2.7□□□□□ -1.98
PCDHGA3Q9Y5H0 SNORD109B-201ENST00000458961 67 ntBASIC2.7□□□□□ -1.98
PCDHGA3Q9Y5H0 SNORD109A-201ENST00000459128 67 ntBASIC2.7□□□□□ -1.98
PCDHGA3Q9Y5H0 RN7SL297P-201ENST00000483161 293 ntBASIC2.7□□□□□ -1.98
PCDHGA3Q9Y5H0 RNA5SP137-201ENST00000516833 135 ntBASIC2.7□□□□□ -1.98
PCDHGA3Q9Y5H0 MIR3670-2-201ENST00000582974 65 ntBASIC2.7□□□□□ -1.98
PCDHGA3Q9Y5H0 MIR3670-1-201ENST00000584160 65 ntBASIC2.7□□□□□ -1.98
PCDHGA3Q9Y5H0 MIR3670-3-201ENST00000584855 65 ntBASIC2.7□□□□□ -1.98
PCDHGA3Q9Y5H0 AC037487.3-201ENST00000606668 112 ntBASIC2.7□□□□□ -1.98
PCDHGA3Q9Y5H0 MIR3670-4-201ENST00000612260 65 ntBASIC2.7□□□□□ -1.98
PCDHGA3Q9Y5H0 AL590240.4-201ENST00000616908 390 ntBASIC2.7□□□□□ -1.98
PCDHGA3Q9Y5H0 AC091932.3-201ENST00000624223 323 ntBASIC2.7□□□□□ -1.98
PCDHGA3Q9Y5H0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.7□□□□□ -1.98
PCDHGA3Q9Y5H0 FO624990.1-201ENST00000636373 85 ntBASIC2.7□□□□□ -1.98
PCDHGA3Q9Y5H0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.7□□□□□ -1.98
PCDHGA3Q9Y5H0 AC092593.1-201ENST00000515413 1815 ntBASIC2.7□□□□□ -1.98
PCDHGA3Q9Y5H0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PCDHGA3Q9Y5H0 SNORD114-7-201ENST00000362520 77 ntBASIC2.69□□□□□ -1.98
PCDHGA3Q9Y5H0 Y_RNA.193-201ENST00000363979 102 ntBASIC2.69□□□□□ -1.98
PCDHGA3Q9Y5H0 Y_RNA.331-201ENST00000365267 102 ntBASIC2.69□□□□□ -1.98
PCDHGA3Q9Y5H0 RNU6-418P-201ENST00000384035 107 ntBASIC2.69□□□□□ -1.98
PCDHGA3Q9Y5H0 Y_RNA.446-201ENST00000384178 104 ntBASIC2.69□□□□□ -1.98
PCDHGA3Q9Y5H0 SNORD14D-201ENST00000384390 87 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms