Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RNU6-1019P-201ENST00000364424 107 ntBASIC1.56□□□□□ -2.16
ATG4BQ9Y4P1 RNA5SP363-201ENST00000365072 115 ntBASIC1.56□□□□□ -2.16
ATG4BQ9Y4P1 Y_RNA.339-201ENST00000365325 102 ntBASIC1.56□□□□□ -2.16
ATG4BQ9Y4P1 Y_RNA.482-201ENST00000384377 111 ntBASIC1.56□□□□□ -2.16
ATG4BQ9Y4P1 EBAG9P1-201ENST00000418955 543 ntBASIC1.56□□□□□ -2.16
ATG4BQ9Y4P1 MTND3P23-201ENST00000431980 347 ntBASIC1.56□□□□□ -2.16
ATG4BQ9Y4P1 FTH1P12-201ENST00000432137 551 ntBASIC1.56□□□□□ -2.16
ATG4BQ9Y4P1 RPL23AP50-201ENST00000434149 455 ntBASIC1.56□□□□□ -2.16
ATG4BQ9Y4P1 AC099677.2-201ENST00000436385 175 ntBASIC1.56□□□□□ -2.16
ATG4BQ9Y4P1 AC069257.2-201ENST00000441819 155 ntBASIC1.56□□□□□ -2.16
ATG4BQ9Y4P1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.56□□□□□ -2.16
ATG4BQ9Y4P1 SNORD13-201ENST00000459299 104 ntBASIC1.56□□□□□ -2.16
ATG4BQ9Y4P1 AC011406.1-201ENST00000512440 370 ntBASIC1.56□□□□□ -2.16
ATG4BQ9Y4P1 RNA5SP384-201ENST00000516615 116 ntBASIC1.56□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-344P-201ENST00000516635 111 ntBASIC1.56□□□□□ -2.16
ATG4BQ9Y4P1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.56□□□□□ -2.16
ATG4BQ9Y4P1 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.56□□□□□ -2.16
ATG4BQ9Y4P1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.56□□□□□ -2.16
ATG4BQ9Y4P1 AC100812.1-201ENST00000607622 580 ntBASIC1.56□□□□□ -2.16
ATG4BQ9Y4P1 MIR8074-201ENST00000615081 81 ntBASIC1.56□□□□□ -2.16
ATG4BQ9Y4P1 MTND4P12-201ENST00000498999 1377 ntBASIC1.56□□□□□ -2.16
ATG4BQ9Y4P1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.56□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-280P-201ENST00000364145 104 ntBASIC1.55□□□□□ -2.16
ATG4BQ9Y4P1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.55□□□□□ -2.16
ATG4BQ9Y4P1 Y_RNA.490-201ENST00000384413 102 ntBASIC1.55□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-331P-201ENST00000384724 107 ntBASIC1.55□□□□□ -2.16
ATG4BQ9Y4P1 MIR520A-201ENST00000384862 85 ntBASIC1.55□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-360P-201ENST00000390944 104 ntBASIC1.55□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-159P-201ENST00000391080 106 ntBASIC1.55□□□□□ -2.16
ATG4BQ9Y4P1 RNA5SP504-201ENST00000410676 117 ntBASIC1.55□□□□□ -2.16
ATG4BQ9Y4P1 PDCL2P1-201ENST00000419302 352 ntBASIC1.55□□□□□ -2.16
ATG4BQ9Y4P1 USP9YP16-201ENST00000430287 407 ntBASIC1.55□□□□□ -2.16
ATG4BQ9Y4P1 USP9YP23-201ENST00000455085 407 ntBASIC1.55□□□□□ -2.16
ATG4BQ9Y4P1 RNU7-87P-201ENST00000459343 62 ntBASIC1.55□□□□□ -2.16
ATG4BQ9Y4P1 AC005014.2-201ENST00000607795 599 ntBASIC1.55□□□□□ -2.16
ATG4BQ9Y4P1 AC126177.8-201ENST00000618339 1015 ntBASIC1.55□□□□□ -2.16
ATG4BQ9Y4P1 AC008873.1-201ENST00000625051 138 ntBASIC1.55□□□□□ -2.16
ATG4BQ9Y4P1 TPTEP1-208ENST00000636884 213 ntBASIC1.55□□□□□ -2.16
ATG4BQ9Y4P1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.55□□□□□ -2.16
ATG4BQ9Y4P1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
ATG4BQ9Y4P1 Y_RNA.106-201ENST00000363189 100 ntBASIC1.54□□□□□ -2.16
ATG4BQ9Y4P1 Y_RNA.404-201ENST00000383978 102 ntBASIC1.54□□□□□ -2.16
ATG4BQ9Y4P1 Y_RNA.415-201ENST00000384012 112 ntBASIC1.54□□□□□ -2.16
ATG4BQ9Y4P1 SNORA67.2-201ENST00000384300 149 ntBASIC1.54□□□□□ -2.16
ATG4BQ9Y4P1 MIR515-2-201ENST00000384883 83 ntBASIC1.54□□□□□ -2.16
ATG4BQ9Y4P1 MIR515-1-201ENST00000384884 83 ntBASIC1.54□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-700P-201ENST00000391043 107 ntBASIC1.54□□□□□ -2.16
ATG4BQ9Y4P1 AL117342.1-201ENST00000404861 406 ntBASIC1.54□□□□□ -2.16
ATG4BQ9Y4P1 CST2P1-201ENST00000425770 87 ntBASIC1.54□□□□□ -2.16
ATG4BQ9Y4P1 HMGN2P34-201ENST00000437647 269 ntBASIC1.54□□□□□ -2.16
ATG4BQ9Y4P1 HSPE1P21-201ENST00000438283 308 ntBASIC1.54□□□□□ -2.16
ATG4BQ9Y4P1 AC091179.3-201ENST00000474761 144 ntBASIC1.54□□□□□ -2.16
ATG4BQ9Y4P1 PRDX4P1-201ENST00000507189 574 ntBASIC1.54□□□□□ -2.16
ATG4BQ9Y4P1 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.54□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-1213P-201ENST00000517075 94 ntBASIC1.54□□□□□ -2.16
ATG4BQ9Y4P1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.54□□□□□ -2.16
ATG4BQ9Y4P1 AC068205.3-201ENST00000636385 468 ntBASIC1.54□□□□□ -2.16
ATG4BQ9Y4P1 AC099654.5-201ENST00000636479 350 ntBASIC1.54□□□□□ -2.16
ATG4BQ9Y4P1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.54□□□□□ -2.16
ATG4BQ9Y4P1 RNU1-62P-201ENST00000362599 164 ntBASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 RNY1P16-201ENST00000363063 111 ntBASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 Y_RNA.179-201ENST00000363844 90 ntBASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 SNORD81.2-201ENST00000365153 76 ntBASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-439P-201ENST00000384188 106 ntBASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-793P-201ENST00000384233 104 ntBASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 MIR10B-201ENST00000385011 110 ntBASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 MIR548B-201ENST00000385247 97 ntBASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 SNORA75.4-201ENST00000391278 119 ntBASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 FGF7P8-201ENST00000402994 292 ntBASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 MIR1253-201ENST00000408273 105 ntBASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 RNU2-7P-201ENST00000410794 178 ntBASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 AC007098.1-201ENST00000420122 367 ntBASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-1146P-201ENST00000516282 102 ntBASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 SCARNA16.2-201ENST00000516520 172 ntBASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 RNA5SP481-201ENST00000516814 122 ntBASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 AC010615.1-201ENST00000594254 1764 ntBASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 snoZ196.1-201ENST00000625269 89 ntBASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.53□□□□□ -2.16
ATG4BQ9Y4P1 AC006026.1-201ENST00000444025 1803 ntBASIC1.52□□□□□ -2.17
ATG4BQ9Y4P1 MTND5P16-201ENST00000460269 1703 ntBASIC1.52□□□□□ -2.17
ATG4BQ9Y4P1 Y_RNA.166-201ENST00000363730 102 ntBASIC1.52□□□□□ -2.17
ATG4BQ9Y4P1 RNU5F-3P-201ENST00000363767 117 ntBASIC1.52□□□□□ -2.17
ATG4BQ9Y4P1 SNORA63D-201ENST00000364359 132 ntBASIC1.52□□□□□ -2.17
ATG4BQ9Y4P1 SNORA72.2-201ENST00000365028 127 ntBASIC1.52□□□□□ -2.17
ATG4BQ9Y4P1 RNU4-14P-201ENST00000410858 122 ntBASIC1.52□□□□□ -2.17
ATG4BQ9Y4P1 RNU6-1304P-201ENST00000411374 106 ntBASIC1.52□□□□□ -2.17
ATG4BQ9Y4P1 RN7SKP101-201ENST00000411376 320 ntBASIC1.52□□□□□ -2.17
ATG4BQ9Y4P1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.52□□□□□ -2.17
ATG4BQ9Y4P1 AC092423.1-201ENST00000430165 186 ntBASIC1.52□□□□□ -2.17
ATG4BQ9Y4P1 AC245047.4-201ENST00000433189 144 ntBASIC1.52□□□□□ -2.17
ATG4BQ9Y4P1 AC098614.3-201ENST00000438957 440 ntBASIC1.52□□□□□ -2.17
ATG4BQ9Y4P1 RBMX2P4-201ENST00000441256 376 ntBASIC1.52□□□□□ -2.17
ATG4BQ9Y4P1 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms