Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AL713866.2-201ENST00000603579 219 ntBASIC3.12□□□□□ -1.91
PPARGC1AQ9UBK2 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.12□□□□□ -1.91
PPARGC1AQ9UBK2 MIR7515-201ENST00000637837 67 ntBASIC3.12□□□□□ -1.91
PPARGC1AQ9UBK2 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PPARGC1AQ9UBK2 RNU6-545P-201ENST00000362681 104 ntBASIC3.11□□□□□ -1.91
PPARGC1AQ9UBK2 RNU1-72P-201ENST00000362976 153 ntBASIC3.11□□□□□ -1.91
PPARGC1AQ9UBK2 RNU6-324P-201ENST00000363957 106 ntBASIC3.11□□□□□ -1.91
PPARGC1AQ9UBK2 SNORA68.1-201ENST00000364537 132 ntBASIC3.11□□□□□ -1.91
PPARGC1AQ9UBK2 RNU6-211P-201ENST00000384047 107 ntBASIC3.11□□□□□ -1.91
PPARGC1AQ9UBK2 MIR548B-201ENST00000385247 97 ntBASIC3.11□□□□□ -1.91
PPARGC1AQ9UBK2 AL031003.1-201ENST00000404229 172 ntBASIC3.11□□□□□ -1.91
PPARGC1AQ9UBK2 RNA5SP274-201ENST00000410484 108 ntBASIC3.11□□□□□ -1.91
PPARGC1AQ9UBK2 AL139281.1-201ENST00000422120 335 ntBASIC3.11□□□□□ -1.91
PPARGC1AQ9UBK2 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.11□□□□□ -1.91
PPARGC1AQ9UBK2 AC080013.2-201ENST00000460866 323 ntBASIC3.11□□□□□ -1.91
PPARGC1AQ9UBK2 HMGN2P9-201ENST00000476875 229 ntBASIC3.11□□□□□ -1.91
PPARGC1AQ9UBK2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.11□□□□□ -1.91
PPARGC1AQ9UBK2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.11□□□□□ -1.91
PPARGC1AQ9UBK2 AC107393.1-201ENST00000512403 346 ntBASIC3.11□□□□□ -1.91
PPARGC1AQ9UBK2 RNU6-1098P-201ENST00000516772 96 ntBASIC3.11□□□□□ -1.91
PPARGC1AQ9UBK2 RNU6-586P-201ENST00000517265 104 ntBASIC3.11□□□□□ -1.91
PPARGC1AQ9UBK2 MIR4506-201ENST00000584693 77 ntBASIC3.11□□□□□ -1.91
PPARGC1AQ9UBK2 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.11□□□□□ -1.91
PPARGC1AQ9UBK2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PPARGC1AQ9UBK2 AC131280.1-202ENST00000624067 4211 ntBASIC3.11□□□□□ -1.91
PPARGC1AQ9UBK2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PPARGC1AQ9UBK2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PPARGC1AQ9UBK2 RNU6-682P-201ENST00000363843 106 ntBASIC3.1□□□□□ -1.91
PPARGC1AQ9UBK2 RNU6-1305P-201ENST00000364353 104 ntBASIC3.1□□□□□ -1.91
PPARGC1AQ9UBK2 RNU6-1274P-201ENST00000384557 107 ntBASIC3.1□□□□□ -1.91
PPARGC1AQ9UBK2 MIR887-201ENST00000401258 79 ntBASIC3.1□□□□□ -1.91
PPARGC1AQ9UBK2 OOSP1P1-201ENST00000423265 274 ntBASIC3.1□□□□□ -1.91
PPARGC1AQ9UBK2 RPL23AP83-201ENST00000434984 473 ntBASIC3.1□□□□□ -1.91
PPARGC1AQ9UBK2 S100A11P2-201ENST00000467589 312 ntBASIC3.1□□□□□ -1.91
PPARGC1AQ9UBK2 SNORA70.12-201ENST00000516084 153 ntBASIC3.1□□□□□ -1.91
PPARGC1AQ9UBK2 RN7SKP43-201ENST00000516173 320 ntBASIC3.1□□□□□ -1.91
PPARGC1AQ9UBK2 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.1□□□□□ -1.91
PPARGC1AQ9UBK2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.1□□□□□ -1.91
PPARGC1AQ9UBK2 snoU18.1-201ENST00000629629 71 ntBASIC3.1□□□□□ -1.91
PPARGC1AQ9UBK2 U6.115-201ENST00000636045 103 ntBASIC3.1□□□□□ -1.91
PPARGC1AQ9UBK2 U6.106-201ENST00000636360 105 ntBASIC3.1□□□□□ -1.91
PPARGC1AQ9UBK2 AC009487.4-201ENST00000624969 3585 ntBASIC3.1□□□□□ -1.91
PPARGC1AQ9UBK2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.1□□□□□ -1.91
PPARGC1AQ9UBK2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.1□□□□□ -1.91
PPARGC1AQ9UBK2 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.09□□□□□ -1.91
PPARGC1AQ9UBK2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PPARGC1AQ9UBK2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.91
PPARGC1AQ9UBK2 RNU6-234P-201ENST00000365229 104 ntBASIC3.09□□□□□ -1.91
PPARGC1AQ9UBK2 SNORA26.7-201ENST00000391288 122 ntBASIC3.09□□□□□ -1.91
PPARGC1AQ9UBK2 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.09□□□□□ -1.91
PPARGC1AQ9UBK2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.09□□□□□ -1.91
PPARGC1AQ9UBK2 MIR1283-1-201ENST00000408494 87 ntBASIC3.09□□□□□ -1.91
PPARGC1AQ9UBK2 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.09□□□□□ -1.91
PPARGC1AQ9UBK2 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.09□□□□□ -1.91
PPARGC1AQ9UBK2 RPL30P4-201ENST00000429309 333 ntBASIC3.09□□□□□ -1.91
PPARGC1AQ9UBK2 AC092427.1-202ENST00000430569 476 ntBASIC3.09□□□□□ -1.91
PPARGC1AQ9UBK2 RPS29P26-201ENST00000477483 171 ntBASIC3.09□□□□□ -1.91
PPARGC1AQ9UBK2 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.09□□□□□ -1.91
PPARGC1AQ9UBK2 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.09□□□□□ -1.91
PPARGC1AQ9UBK2 RNA5SP341-201ENST00000516261 117 ntBASIC3.09□□□□□ -1.91
PPARGC1AQ9UBK2 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.09□□□□□ -1.91
PPARGC1AQ9UBK2 AC136628.3-201ENST00000521868 290 ntBASIC3.09□□□□□ -1.91
PPARGC1AQ9UBK2 AC105245.1-201ENST00000581934 244 ntBASIC3.09□□□□□ -1.91
PPARGC1AQ9UBK2 AC069294.1-201ENST00000608397 350 ntBASIC3.09□□□□□ -1.91
PPARGC1AQ9UBK2 AC007318.2-201ENST00000620999 243 ntBASIC3.09□□□□□ -1.91
PPARGC1AQ9UBK2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.09□□□□□ -1.92
PPARGC1AQ9UBK2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.09□□□□□ -1.92
PPARGC1AQ9UBK2 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PPARGC1AQ9UBK2 Y_RNA.233-201ENST00000364407 101 ntBASIC3.08□□□□□ -1.92
PPARGC1AQ9UBK2 U8.9-201ENST00000365667 134 ntBASIC3.08□□□□□ -1.92
PPARGC1AQ9UBK2 RNU6-918P-201ENST00000391219 106 ntBASIC3.08□□□□□ -1.92
PPARGC1AQ9UBK2 MIR1185-2-201ENST00000408687 86 ntBASIC3.08□□□□□ -1.92
PPARGC1AQ9UBK2 COX6CP10-201ENST00000416832 224 ntBASIC3.08□□□□□ -1.92
PPARGC1AQ9UBK2 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.08□□□□□ -1.92
PPARGC1AQ9UBK2 AP004217.1-201ENST00000480579 346 ntBASIC3.08□□□□□ -1.92
PPARGC1AQ9UBK2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.08□□□□□ -1.92
PPARGC1AQ9UBK2 AC007536.1-201ENST00000533382 349 ntBASIC3.08□□□□□ -1.92
PPARGC1AQ9UBK2 MIR3200-201ENST00000580767 85 ntBASIC3.08□□□□□ -1.92
PPARGC1AQ9UBK2 MIR4753-201ENST00000585119 83 ntBASIC3.08□□□□□ -1.92
PPARGC1AQ9UBK2 AL162274.2-201ENST00000614406 332 ntBASIC3.08□□□□□ -1.92
PPARGC1AQ9UBK2 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.08□□□□□ -1.92
PPARGC1AQ9UBK2 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.07□□□□□ -1.92
PPARGC1AQ9UBK2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.07□□□□□ -1.92
PPARGC1AQ9UBK2 RNU6-653P-201ENST00000363074 106 ntBASIC3.07□□□□□ -1.92
PPARGC1AQ9UBK2 Y_RNA.240-201ENST00000364469 95 ntBASIC3.07□□□□□ -1.92
PPARGC1AQ9UBK2 RNU6-47P-201ENST00000383866 107 ntBASIC3.07□□□□□ -1.92
PPARGC1AQ9UBK2 SNORA48.5-201ENST00000391143 135 ntBASIC3.07□□□□□ -1.92
PPARGC1AQ9UBK2 RN7SKP123-201ENST00000410732 291 ntBASIC3.07□□□□□ -1.92
PPARGC1AQ9UBK2 RNU4-61P-201ENST00000411243 107 ntBASIC3.07□□□□□ -1.92
PPARGC1AQ9UBK2 BTF3P11-201ENST00000426582 477 ntBASIC3.07□□□□□ -1.92
PPARGC1AQ9UBK2 RNU7-14P-201ENST00000459331 62 ntBASIC3.07□□□□□ -1.92
PPARGC1AQ9UBK2 RN7SL633P-201ENST00000488974 297 ntBASIC3.07□□□□□ -1.92
PPARGC1AQ9UBK2 RPPH1-2P-201ENST00000516688 293 ntBASIC3.07□□□□□ -1.92
PPARGC1AQ9UBK2 AC109329.2-201ENST00000519658 482 ntBASIC3.07□□□□□ -1.92
PPARGC1AQ9UBK2 AC107016.2-201ENST00000547968 190 ntBASIC3.07□□□□□ -1.92
PPARGC1AQ9UBK2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
PPARGC1AQ9UBK2 MIR3117-201ENST00000584034 78 ntBASIC3.07□□□□□ -1.92
PPARGC1AQ9UBK2 MIR3616-201ENST00000584070 92 ntBASIC3.07□□□□□ -1.92
PPARGC1AQ9UBK2 AL008718.3-201ENST00000610217 321 ntBASIC3.07□□□□□ -1.92
PPARGC1AQ9UBK2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 214 ms