Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 MIR548B-201ENST00000385247 97 ntBASIC2.36□□□□□ -2.03
HMGB4Q8WW32 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HMGB4Q8WW32 MRPL35P1-201ENST00000404272 572 ntBASIC2.36□□□□□ -2.03
HMGB4Q8WW32 SUMO1P4-201ENST00000429430 302 ntBASIC2.36□□□□□ -2.03
HMGB4Q8WW32 MTCO1P44-201ENST00000441935 243 ntBASIC2.36□□□□□ -2.03
HMGB4Q8WW32 AC010531.2-201ENST00000465012 153 ntBASIC2.36□□□□□ -2.03
HMGB4Q8WW32 AC114982.1-201ENST00000469402 321 ntBASIC2.36□□□□□ -2.03
HMGB4Q8WW32 RPL26P26-201ENST00000480251 434 ntBASIC2.36□□□□□ -2.03
HMGB4Q8WW32 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.36□□□□□ -2.03
HMGB4Q8WW32 MIR3670-2-201ENST00000582974 65 ntBASIC2.36□□□□□ -2.03
HMGB4Q8WW32 MIR3670-1-201ENST00000584160 65 ntBASIC2.36□□□□□ -2.03
HMGB4Q8WW32 MIR3670-3-201ENST00000584855 65 ntBASIC2.36□□□□□ -2.03
HMGB4Q8WW32 AL390123.1-201ENST00000603216 237 ntBASIC2.36□□□□□ -2.03
HMGB4Q8WW32 MIR3670-4-201ENST00000612260 65 ntBASIC2.36□□□□□ -2.03
HMGB4Q8WW32 AC010205.1-201ENST00000616668 449 ntBASIC2.36□□□□□ -2.03
HMGB4Q8WW32 AL162373.1-201ENST00000620433 407 ntBASIC2.36□□□□□ -2.03
HMGB4Q8WW32 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
HMGB4Q8WW32 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HMGB4Q8WW32 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
HMGB4Q8WW32 RNU4-50P-201ENST00000364361 141 ntBASIC2.35□□□□□ -2.03
HMGB4Q8WW32 RNU6-450P-201ENST00000364654 107 ntBASIC2.35□□□□□ -2.03
HMGB4Q8WW32 Y_RNA.389-201ENST00000383924 113 ntBASIC2.35□□□□□ -2.03
HMGB4Q8WW32 RNU6-926P-201ENST00000384075 107 ntBASIC2.35□□□□□ -2.03
HMGB4Q8WW32 RNU1-104P-201ENST00000517280 175 ntBASIC2.35□□□□□ -2.03
HMGB4Q8WW32 AC018448.1-201ENST00000552843 316 ntBASIC2.35□□□□□ -2.03
HMGB4Q8WW32 MIR4659A-201ENST00000580269 81 ntBASIC2.35□□□□□ -2.03
HMGB4Q8WW32 AL031274.2-201ENST00000599419 203 ntBASIC2.35□□□□□ -2.03
HMGB4Q8WW32 AC124312.5-201ENST00000604451 268 ntBASIC2.35□□□□□ -2.03
HMGB4Q8WW32 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGB4Q8WW32 AL121655.1-201ENST00000605811 308 ntBASIC2.35□□□□□ -2.03
HMGB4Q8WW32 AC240442.1-201ENST00000616055 283 ntBASIC2.35□□□□□ -2.03
HMGB4Q8WW32 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.34□□□□□ -2.03
HMGB4Q8WW32 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.34□□□□□ -2.03
HMGB4Q8WW32 SNORA3A-201ENST00000364113 130 ntBASIC2.34□□□□□ -2.03
HMGB4Q8WW32 RNU6-418P-201ENST00000384035 107 ntBASIC2.34□□□□□ -2.03
HMGB4Q8WW32 Y_RNA.458-201ENST00000384240 102 ntBASIC2.34□□□□□ -2.03
HMGB4Q8WW32 Y_RNA.527-201ENST00000384573 102 ntBASIC2.34□□□□□ -2.03
HMGB4Q8WW32 RNU6-101P-201ENST00000410323 104 ntBASIC2.34□□□□□ -2.03
HMGB4Q8WW32 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.34□□□□□ -2.03
HMGB4Q8WW32 AL591806.2-201ENST00000433122 173 ntBASIC2.34□□□□□ -2.03
HMGB4Q8WW32 HMGN2P3-201ENST00000433603 273 ntBASIC2.34□□□□□ -2.03
HMGB4Q8WW32 HMGN2P5-201ENST00000436882 273 ntBASIC2.34□□□□□ -2.03
HMGB4Q8WW32 AL357134.1-201ENST00000445848 426 ntBASIC2.34□□□□□ -2.03
HMGB4Q8WW32 AC245102.2-201ENST00000448956 180 ntBASIC2.34□□□□□ -2.03
HMGB4Q8WW32 snoU13.23-201ENST00000458863 104 ntBASIC2.34□□□□□ -2.03
HMGB4Q8WW32 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.34□□□□□ -2.03
HMGB4Q8WW32 AC067942.3-201ENST00000512025 362 ntBASIC2.34□□□□□ -2.03
HMGB4Q8WW32 AC006504.6-201ENST00000590142 199 ntBASIC2.34□□□□□ -2.03
HMGB4Q8WW32 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.34□□□□□ -2.03
HMGB4Q8WW32 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.34□□□□□ -2.03
HMGB4Q8WW32 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.34□□□□□ -2.03
HMGB4Q8WW32 AC011476.5-201ENST00000615594 130 ntBASIC2.34□□□□□ -2.03
HMGB4Q8WW32 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.34□□□□□ -2.03
HMGB4Q8WW32 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.34□□□□□ -2.04
HMGB4Q8WW32 AC016717.2-201ENST00000609089 5141 ntBASIC2.34□□□□□ -2.04
HMGB4Q8WW32 LINC02555-201ENST00000563933 1951 ntBASIC2.34□□□□□ -2.04
HMGB4Q8WW32 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.33□□□□□ -2.04
HMGB4Q8WW32 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
HMGB4Q8WW32 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HMGB4Q8WW32 SNORD114-1-201ENST00000362705 72 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 RNU6-961P-201ENST00000363893 105 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 RNU6-1164P-201ENST00000364428 107 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 SNORA63.7-201ENST00000365579 123 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 Y_RNA.455-201ENST00000384230 98 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 RNU6-1235P-201ENST00000384559 107 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 Y_RNA.551-201ENST00000384661 102 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 MIR764-201ENST00000390811 85 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 RNU6-985P-201ENST00000410182 104 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.33□□□□□ -2.04
HMGB4Q8WW32 AC139712.2-201ENST00000424302 339 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 RPS12P2-201ENST00000439728 269 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 RPEP5-201ENST00000441137 268 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 AC074290.1-201ENST00000448883 135 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 AC016717.1-201ENST00000448918 286 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 AL139109.1-201ENST00000455491 297 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 RNU6-625P-201ENST00000459412 107 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 RNU6-498P-201ENST00000459468 107 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 RNU7-57P-201ENST00000459540 60 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 AC108210.2-201ENST00000503681 201 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.33□□□□□ -2.04
HMGB4Q8WW32 RNU6-408P-201ENST00000515910 100 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 RNU6-948P-201ENST00000516374 107 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 SCARNA15.1-201ENST00000516384 125 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 RNU2-34P-201ENST00000516534 121 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 Y_RNA.715-201ENST00000517082 110 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.33□□□□□ -2.04
HMGB4Q8WW32 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HMGB4Q8WW32 AC009487.4-201ENST00000624969 3585 ntBASIC2.33□□□□□ -2.04
HMGB4Q8WW32 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HMGB4Q8WW32 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.32□□□□□ -2.04
HMGB4Q8WW32 MIR410-201ENST00000362222 80 ntBASIC2.32□□□□□ -2.04
HMGB4Q8WW32 RNA5SP393-201ENST00000363423 117 ntBASIC2.32□□□□□ -2.04
HMGB4Q8WW32 RNU6-1264P-201ENST00000383891 107 ntBASIC2.32□□□□□ -2.04
HMGB4Q8WW32 Y_RNA.471-201ENST00000384312 102 ntBASIC2.32□□□□□ -2.04
HMGB4Q8WW32 Y_RNA.498-201ENST00000384460 102 ntBASIC2.32□□□□□ -2.04
HMGB4Q8WW32 RNU6-1160P-201ENST00000384546 104 ntBASIC2.32□□□□□ -2.04
HMGB4Q8WW32 MIR606-201ENST00000384851 96 ntBASIC2.32□□□□□ -2.04
HMGB4Q8WW32 MIR29C-201ENST00000385231 88 ntBASIC2.32□□□□□ -2.04
HMGB4Q8WW32 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 381.7 ms