Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 RNY3P1-201ENST00000365085 102 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 RNU6-1240P-201ENST00000365155 104 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 RNY3-201ENST00000365484 102 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 RNU6-1264P-201ENST00000383891 107 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 Y_RNA.463-201ENST00000384271 102 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 MIR221-201ENST00000385135 110 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 MIR1253-201ENST00000408273 105 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 AL135786.1-201ENST00000415892 214 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.06□□□□□ -2.08
ABCD3P28288 AL356320.1-201ENST00000429616 163 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 PCNPP5-201ENST00000452246 481 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 TRBV12-1-201ENST00000479785 344 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 RNU6-976P-201ENST00000516086 111 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 RNU6-699P-201ENST00000517081 110 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.06□□□□□ -2.08
ABCD3P28288 U2.15-201ENST00000611544 191 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 U2.16-201ENST00000613119 191 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 U2.12-201ENST00000613778 191 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 U2.20-201ENST00000613956 192 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 U2.9-201ENST00000615427 191 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 U2.11-201ENST00000616345 191 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 U2.2-201ENST00000616535 191 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 U2.3-201ENST00000617785 191 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 U2.19-201ENST00000618602 191 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 RNU2-1-201ENST00000618664 191 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 U2.6-201ENST00000619225 191 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 U2.5-201ENST00000619465 191 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 U2.10-201ENST00000620268 191 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 AC006001.4-201ENST00000622243 395 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 ZNF720P1-201ENST00000562403 1939 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
ABCD3P28288 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
ABCD3P28288 RNU6-1115P-201ENST00000362490 106 ntBASIC2.05□□□□□ -2.08
ABCD3P28288 RNU6-1301P-201ENST00000362724 104 ntBASIC2.05□□□□□ -2.08
ABCD3P28288 RNU1-96P-201ENST00000364163 162 ntBASIC2.05□□□□□ -2.08
ABCD3P28288 SNORA51.11-201ENST00000384442 131 ntBASIC2.05□□□□□ -2.08
ABCD3P28288 SNORA3.2-201ENST00000408221 125 ntBASIC2.05□□□□□ -2.08
ABCD3P28288 U3.40-201ENST00000408706 208 ntBASIC2.05□□□□□ -2.08
ABCD3P28288 AC009310.1-201ENST00000414414 451 ntBASIC2.05□□□□□ -2.08
ABCD3P28288 MRPS18CP6-201ENST00000423587 223 ntBASIC2.05□□□□□ -2.08
ABCD3P28288 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.05□□□□□ -2.08
ABCD3P28288 RNA5SP57-201ENST00000459463 123 ntBASIC2.05□□□□□ -2.08
ABCD3P28288 AC079804.2-201ENST00000490376 200 ntBASIC2.05□□□□□ -2.08
ABCD3P28288 RNU6-107P-201ENST00000516643 102 ntBASIC2.05□□□□□ -2.08
ABCD3P28288 SNORD116.3-201ENST00000517176 78 ntBASIC2.05□□□□□ -2.08
ABCD3P28288 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.05□□□□□ -2.08
ABCD3P28288 SNRPGP18-201ENST00000553000 214 ntBASIC2.05□□□□□ -2.08
ABCD3P28288 AC091544.4-201ENST00000555268 342 ntBASIC2.05□□□□□ -2.08
ABCD3P28288 SUB1P4-201ENST00000566062 339 ntBASIC2.05□□□□□ -2.08
ABCD3P28288 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.05□□□□□ -2.08
ABCD3P28288 AC009831.4-201ENST00000620744 325 ntBASIC2.05□□□□□ -2.08
ABCD3P28288 MIR338-201ENST00000636369 67 ntBASIC2.05□□□□□ -2.08
ABCD3P28288 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.05□□□□□ -2.08
ABCD3P28288 AC245060.5-201ENST00000610778 3293 ntBASIC2.05□□□□□ -2.08
ABCD3P28288 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
ABCD3P28288 RNU6-862P-201ENST00000362804 105 ntBASIC2.04□□□□□ -2.08
ABCD3P28288 SNORA72.2-201ENST00000365028 127 ntBASIC2.04□□□□□ -2.08
ABCD3P28288 RNU6-318P-201ENST00000384283 103 ntBASIC2.04□□□□□ -2.08
ABCD3P28288 MIR628-201ENST00000385229 95 ntBASIC2.04□□□□□ -2.08
ABCD3P28288 AL117342.1-201ENST00000404861 406 ntBASIC2.04□□□□□ -2.08
ABCD3P28288 Z98742.3-201ENST00000418637 326 ntBASIC2.04□□□□□ -2.08
ABCD3P28288 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.04□□□□□ -2.08
ABCD3P28288 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.04□□□□□ -2.08
ABCD3P28288 MRPS17P9-201ENST00000511924 393 ntBASIC2.04□□□□□ -2.08
ABCD3P28288 MIR5094-201ENST00000578766 85 ntBASIC2.04□□□□□ -2.08
ABCD3P28288 MIR3684-201ENST00000579779 74 ntBASIC2.04□□□□□ -2.08
ABCD3P28288 AL133255.1-201ENST00000606374 441 ntBASIC2.04□□□□□ -2.08
ABCD3P28288 U2.1-201ENST00000618978 145 ntBASIC2.04□□□□□ -2.08
ABCD3P28288 MIR6873-201ENST00000622788 63 ntBASIC2.04□□□□□ -2.08
ABCD3P28288 MIRLET7G-201ENST00000362280 84 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 RNU4-42P-201ENST00000364738 142 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 RNA5SP425-201ENST00000410336 112 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 Y_RNA.604-201ENST00000410574 102 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 RNA5SP100-201ENST00000410903 110 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 RNA5SP59-201ENST00000410922 110 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 AC016909.1-201ENST00000415916 166 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 AC099677.2-201ENST00000436385 175 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 HMGN2P34-201ENST00000437647 269 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 AC069257.2-201ENST00000441819 155 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 RNU6-1170P-201ENST00000515974 106 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 RNA5SP200-201ENST00000516360 103 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.03□□□□□ -2.08
ABCD3P28288 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.03□□□□□ -2.08
ABCD3P28288 AL442163.3-201ENST00000554110 156 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 MIR4713-201ENST00000582691 75 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 AC022432.1-201ENST00000595739 310 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 AL096840.1-201ENST00000603287 93 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 MIR6715A-201ENST00000615929 79 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 AL138825.1-201ENST00000618587 192 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 MIR6132-201ENST00000622083 109 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.03□□□□□ -2.08
ABCD3P28288 ZNF658B-202ENST00000615961 3375 ntBASIC2.03□□□□□ -2.08
ABCD3P28288 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
ABCD3P28288 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
ABCD3P28288 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
ABCD3P28288 MIR410-201ENST00000362222 80 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 192.1 ms