Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 RNU7-99P-201ENST00000516271 62 ntBASIC0.4□□□□□ -2.35
SCN2BO60939 SNORA18.6-201ENST00000516792 115 ntBASIC0.4□□□□□ -2.35
SCN2BO60939 RNU6-445P-201ENST00000516949 107 ntBASIC0.4□□□□□ -2.35
SCN2BO60939 RNU1-117P-201ENST00000517041 158 ntBASIC0.4□□□□□ -2.35
SCN2BO60939 MTND2P32-201ENST00000521584 1038 ntBASIC0.4□□□□□ -2.35
SCN2BO60939 AC245884.10-201ENST00000597355 337 ntBASIC0.4□□□□□ -2.35
SCN2BO60939 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.4□□□□□ -2.35
SCN2BO60939 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
SCN2BO60939 RNU6-1266P-201ENST00000362794 105 ntBASIC0.39□□□□□ -2.35
SCN2BO60939 RNU4-21P-201ENST00000362802 126 ntBASIC0.39□□□□□ -2.35
SCN2BO60939 Y_RNA.159-201ENST00000363674 87 ntBASIC0.39□□□□□ -2.35
SCN2BO60939 RNU4-28P-201ENST00000364739 141 ntBASIC0.39□□□□□ -2.35
SCN2BO60939 SNORD87-201ENST00000364849 89 ntBASIC0.39□□□□□ -2.35
SCN2BO60939 RNU6-945P-201ENST00000383947 107 ntBASIC0.39□□□□□ -2.35
SCN2BO60939 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
SCN2BO60939 AL663109.1-201ENST00000411498 844 ntBASIC0.39□□□□□ -2.35
SCN2BO60939 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.39□□□□□ -2.35
SCN2BO60939 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.39□□□□□ -2.35
SCN2BO60939 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.39□□□□□ -2.35
SCN2BO60939 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.39□□□□□ -2.35
SCN2BO60939 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.39□□□□□ -2.35
SCN2BO60939 AC233266.1-201ENST00000454518 96 ntBASIC0.39□□□□□ -2.35
SCN2BO60939 AC245047.8-201ENST00000456455 284 ntBASIC0.39□□□□□ -2.35
SCN2BO60939 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.39□□□□□ -2.35
SCN2BO60939 RNA5SP454-201ENST00000517231 127 ntBASIC0.39□□□□□ -2.35
SCN2BO60939 AP002001.1-203ENST00000534002 267 ntBASIC0.39□□□□□ -2.35
SCN2BO60939 AL118558.2-201ENST00000556294 238 ntBASIC0.39□□□□□ -2.35
SCN2BO60939 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.39□□□□□ -2.35
SCN2BO60939 AC092354.1-201ENST00000606057 376 ntBASIC0.39□□□□□ -2.35
SCN2BO60939 AC006566.1-201ENST00000608943 513 ntBASIC0.39□□□□□ -2.35
SCN2BO60939 U2.17-201ENST00000611454 95 ntBASIC0.39□□□□□ -2.35
SCN2BO60939 AC242852.1-201ENST00000612151 96 ntBASIC0.39□□□□□ -2.35
SCN2BO60939 AC244015.1-201ENST00000622301 99 ntBASIC0.39□□□□□ -2.35
SCN2BO60939 AC007494.3-201ENST00000624660 743 ntBASIC0.39□□□□□ -2.35
SCN2BO60939 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.38□□□□□ -2.35
SCN2BO60939 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.38□□□□□ -2.35
SCN2BO60939 Y_RNA.123-201ENST00000363338 102 ntBASIC0.38□□□□□ -2.35
SCN2BO60939 RNU6-137P-201ENST00000363680 108 ntBASIC0.38□□□□□ -2.35
SCN2BO60939 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.38□□□□□ -2.35
SCN2BO60939 RNU6-42P-201ENST00000384165 107 ntBASIC0.38□□□□□ -2.35
SCN2BO60939 AL031577.2-201ENST00000404133 280 ntBASIC0.38□□□□□ -2.35
SCN2BO60939 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.38□□□□□ -2.35
SCN2BO60939 CALM2P4-201ENST00000430810 426 ntBASIC0.38□□□□□ -2.35
SCN2BO60939 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.38□□□□□ -2.35
SCN2BO60939 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.38□□□□□ -2.35
SCN2BO60939 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
SCN2BO60939 RNU7-167P-201ENST00000459160 62 ntBASIC0.38□□□□□ -2.35
SCN2BO60939 RNU7-180P-201ENST00000459240 63 ntBASIC0.38□□□□□ -2.35
SCN2BO60939 MTND2P14-201ENST00000482139 351 ntBASIC0.38□□□□□ -2.35
SCN2BO60939 AC022493.2-201ENST00000506122 481 ntBASIC0.38□□□□□ -2.35
SCN2BO60939 MTATP6P9-201ENST00000515039 680 ntBASIC0.38□□□□□ -2.35
SCN2BO60939 RNU6-344P-201ENST00000516635 111 ntBASIC0.38□□□□□ -2.35
SCN2BO60939 AC106038.2-201ENST00000520706 568 ntBASIC0.38□□□□□ -2.35
SCN2BO60939 AP001372.4-201ENST00000524889 472 ntBASIC0.38□□□□□ -2.35
SCN2BO60939 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.38□□□□□ -2.35
SCN2BO60939 AC087683.2-201ENST00000611384 326 ntBASIC0.38□□□□□ -2.35
SCN2BO60939 HULC.1-201ENST00000612720 240 ntBASIC0.38□□□□□ -2.35
SCN2BO60939 AC243829.3-201ENST00000622177 108 ntBASIC0.38□□□□□ -2.35
SCN2BO60939 AC134026.1-201ENST00000623249 2239 ntBASIC0.38□□□□□ -2.35
SCN2BO60939 Y_RNA.100-201ENST00000363141 102 ntBASIC0.37□□□□□ -2.35
SCN2BO60939 RNU6-553P-201ENST00000364047 96 ntBASIC0.37□□□□□ -2.35
SCN2BO60939 RNY1P8-201ENST00000383970 114 ntBASIC0.37□□□□□ -2.35
SCN2BO60939 RNA5SP219-201ENST00000390940 113 ntBASIC0.37□□□□□ -2.35
SCN2BO60939 SNORD99-201ENST00000408612 74 ntBASIC0.37□□□□□ -2.35
SCN2BO60939 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.37□□□□□ -2.35
SCN2BO60939 MTND2P18-201ENST00000419962 1030 ntBASIC0.37□□□□□ -2.35
SCN2BO60939 AC244023.1-201ENST00000426884 112 ntBASIC0.37□□□□□ -2.35
SCN2BO60939 HSFY5P-201ENST00000453726 309 ntBASIC0.37□□□□□ -2.35
SCN2BO60939 RNU6-1132P-201ENST00000459214 107 ntBASIC0.37□□□□□ -2.35
SCN2BO60939 AC016957.1-201ENST00000534895 309 ntBASIC0.37□□□□□ -2.35
SCN2BO60939 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
SCN2BO60939 HIF1AP1-201ENST00000553642 175 ntBASIC0.37□□□□□ -2.35
SCN2BO60939 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.37□□□□□ -2.35
SCN2BO60939 MIR3915-201ENST00000578518 97 ntBASIC0.37□□□□□ -2.35
SCN2BO60939 AC234772.3-201ENST00000602277 528 ntBASIC0.37□□□□□ -2.35
SCN2BO60939 AC242498.1-201ENST00000604134 111 ntBASIC0.37□□□□□ -2.35
SCN2BO60939 AL096861.1-201ENST00000610899 123 ntBASIC0.37□□□□□ -2.35
SCN2BO60939 AC243994.1-201ENST00000618627 109 ntBASIC0.37□□□□□ -2.35
SCN2BO60939 U6.73-201ENST00000619194 103 ntBASIC0.37□□□□□ -2.35
SCN2BO60939 AC137590.2-201ENST00000619709 240 ntBASIC0.37□□□□□ -2.35
SCN2BO60939 MIR6513-201ENST00000621188 64 ntBASIC0.37□□□□□ -2.35
SCN2BO60939 SCARNA4-201ENST00000629045 128 ntBASIC0.37□□□□□ -2.35
SCN2BO60939 MIR6516-201ENST00000630554 81 ntBASIC0.37□□□□□ -2.35
SCN2BO60939 OR5AK4P-201ENST00000635912 903 ntBASIC0.37□□□□□ -2.35
SCN2BO60939 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.37□□□□□ -2.35
SCN2BO60939 ZNF204P-201ENST00000416749 2397 ntBASIC0.37□□□□□ -2.35
SCN2BO60939 Y_RNA.265-201ENST00000364677 108 ntBASIC0.36□□□□□ -2.35
SCN2BO60939 RNU1-133P-201ENST00000364867 167 ntBASIC0.36□□□□□ -2.35
SCN2BO60939 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.36□□□□□ -2.35
SCN2BO60939 RNU6-1286P-201ENST00000383871 107 ntBASIC0.36□□□□□ -2.35
SCN2BO60939 SNORD89-201ENST00000390981 114 ntBASIC0.36□□□□□ -2.35
SCN2BO60939 U8.16-201ENST00000391279 133 ntBASIC0.36□□□□□ -2.35
SCN2BO60939 RNU6-584P-201ENST00000410350 95 ntBASIC0.36□□□□□ -2.35
SCN2BO60939 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.36□□□□□ -2.35
SCN2BO60939 MTCO2P11-201ENST00000431069 680 ntBASIC0.36□□□□□ -2.35
SCN2BO60939 Z82188.1-201ENST00000436709 154 ntBASIC0.36□□□□□ -2.35
SCN2BO60939 MTND4P32-201ENST00000437189 1237 ntBASIC0.36□□□□□ -2.35
SCN2BO60939 U8.21-201ENST00000459536 136 ntBASIC0.36□□□□□ -2.35
SCN2BO60939 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.36□□□□□ -2.35
SCN2BO60939 RN7SKP12-201ENST00000516275 143 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 1247.4 ms