Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 AL355355.2-201ENST00000442321 338 ntBASIC18.28■□□□□ 0.52
KRT78Q8N1N4 AC011506.1-201ENST00000474329 610 ntBASIC18.28■□□□□ 0.52
KRT78Q8N1N4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 Z99916.2-201ENST00000604037 246 ntBASIC18.28■□□□□ 0.52
KRT78Q8N1N4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT78Q8N1N4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.27■□□□□ 0.52
KRT78Q8N1N4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.27■□□□□ 0.52
KRT78Q8N1N4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.27■□□□□ 0.52
KRT78Q8N1N4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
KRT78Q8N1N4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT78Q8N1N4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT78Q8N1N4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
KRT78Q8N1N4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.27■□□□□ 0.52
KRT78Q8N1N4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
KRT78Q8N1N4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT78Q8N1N4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
KRT78Q8N1N4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT78Q8N1N4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
KRT78Q8N1N4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.27■□□□□ 0.52
KRT78Q8N1N4 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.27■□□□□ 0.52
KRT78Q8N1N4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.27■□□□□ 0.52
KRT78Q8N1N4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.27■□□□□ 0.52
KRT78Q8N1N4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.27■□□□□ 0.52
KRT78Q8N1N4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.27■□□□□ 0.52
KRT78Q8N1N4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.27■□□□□ 0.52
KRT78Q8N1N4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT78Q8N1N4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.27■□□□□ 0.52
KRT78Q8N1N4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.27■□□□□ 0.51
KRT78Q8N1N4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
KRT78Q8N1N4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
KRT78Q8N1N4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
KRT78Q8N1N4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
KRT78Q8N1N4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
KRT78Q8N1N4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
KRT78Q8N1N4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.27■□□□□ 0.51
KRT78Q8N1N4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
KRT78Q8N1N4 TNXA-203ENST00000507684 2038 ntBASIC18.27■□□□□ 0.51
KRT78Q8N1N4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 AC116562.2-201ENST00000507042 360 ntBASIC18.26■□□□□ 0.51
KRT78Q8N1N4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 AP000692.2-201ENST00000608391 879 ntBASIC18.26■□□□□ 0.51
KRT78Q8N1N4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRT78Q8N1N4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms