Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 U6atac.2-201ENST00000408644 118 ntBASIC3.16□□□□□ -1.9
PPARGC1AQ9UBK2 Y_RNA.597-201ENST00000410463 100 ntBASIC3.16□□□□□ -1.9
PPARGC1AQ9UBK2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.16□□□□□ -1.9
PPARGC1AQ9UBK2 RNU1-117P-201ENST00000517041 158 ntBASIC3.16□□□□□ -1.9
PPARGC1AQ9UBK2 AC018630.3-201ENST00000542637 96 ntBASIC3.16□□□□□ -1.9
PPARGC1AQ9UBK2 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.16□□□□□ -1.9
PPARGC1AQ9UBK2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.16□□□□□ -1.9
PPARGC1AQ9UBK2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.16□□□□□ -1.9
PPARGC1AQ9UBK2 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PPARGC1AQ9UBK2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.15□□□□□ -1.9
PPARGC1AQ9UBK2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PPARGC1AQ9UBK2 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PPARGC1AQ9UBK2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.15□□□□□ -1.9
PPARGC1AQ9UBK2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 Y_RNA.243-201ENST00000364481 109 ntBASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 SNORA51.4-201ENST00000364993 124 ntBASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 Y_RNA.435-201ENST00000384095 112 ntBASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 RNU6-662P-201ENST00000384253 104 ntBASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 SNORD67-201ENST00000390833 111 ntBASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 SNORA40.19-201ENST00000390846 128 ntBASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 SNORA12-201ENST00000391162 147 ntBASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 MIR300-201ENST00000401138 83 ntBASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 U3.40-201ENST00000408706 208 ntBASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 RNU6-710P-201ENST00000410424 105 ntBASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 RNU6-651P-201ENST00000411040 105 ntBASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 Z82209.1-201ENST00000422141 2135 ntBASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 AC008885.1-201ENST00000514930 301 ntBASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 SNORA70.24-201ENST00000517233 118 ntBASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 DEFB117-201ENST00000602356 141 ntBASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PPARGC1AQ9UBK2 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PPARGC1AQ9UBK2 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
PPARGC1AQ9UBK2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
PPARGC1AQ9UBK2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
PPARGC1AQ9UBK2 AC073325.2-201ENST00000339545 159 ntBASIC3.14□□□□□ -1.91
PPARGC1AQ9UBK2 MIR22-201ENST00000362190 85 ntBASIC3.14□□□□□ -1.91
PPARGC1AQ9UBK2 Y_RNA.150-201ENST00000363562 102 ntBASIC3.14□□□□□ -1.91
PPARGC1AQ9UBK2 SNORD115-30-201ENST00000364117 82 ntBASIC3.14□□□□□ -1.91
PPARGC1AQ9UBK2 Y_RNA.304-201ENST00000365011 112 ntBASIC3.14□□□□□ -1.91
PPARGC1AQ9UBK2 SNORA11.1-201ENST00000408133 129 ntBASIC3.14□□□□□ -1.91
PPARGC1AQ9UBK2 MIR1294-201ENST00000408503 142 ntBASIC3.14□□□□□ -1.91
PPARGC1AQ9UBK2 BMS1P22-201ENST00000414726 313 ntBASIC3.14□□□□□ -1.91
PPARGC1AQ9UBK2 AC074290.1-201ENST00000448883 135 ntBASIC3.14□□□□□ -1.91
PPARGC1AQ9UBK2 AC083906.5-201ENST00000503722 328 ntBASIC3.14□□□□□ -1.91
PPARGC1AQ9UBK2 RNU6-436P-201ENST00000516171 114 ntBASIC3.14□□□□□ -1.91
PPARGC1AQ9UBK2 RNU6-1212P-201ENST00000517023 104 ntBASIC3.14□□□□□ -1.91
PPARGC1AQ9UBK2 AC009127.3-201ENST00000570531 403 ntBASIC3.14□□□□□ -1.91
PPARGC1AQ9UBK2 MIR4325-201ENST00000583049 90 ntBASIC3.14□□□□□ -1.91
PPARGC1AQ9UBK2 AL161756.2-201ENST00000604597 246 ntBASIC3.14□□□□□ -1.91
PPARGC1AQ9UBK2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.14□□□□□ -1.91
PPARGC1AQ9UBK2 AL078604.3-201ENST00000615580 211 ntBASIC3.14□□□□□ -1.91
PPARGC1AQ9UBK2 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PPARGC1AQ9UBK2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.14□□□□□ -1.91
PPARGC1AQ9UBK2 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.13□□□□□ -1.91
PPARGC1AQ9UBK2 AC108206.1-201ENST00000570186 4159 ntBASIC3.13□□□□□ -1.91
PPARGC1AQ9UBK2 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
PPARGC1AQ9UBK2 MIR422A-201ENST00000362286 90 ntBASIC3.13□□□□□ -1.91
PPARGC1AQ9UBK2 SNORD114-7-201ENST00000362520 77 ntBASIC3.13□□□□□ -1.91
PPARGC1AQ9UBK2 RNU6-1272P-201ENST00000362776 107 ntBASIC3.13□□□□□ -1.91
PPARGC1AQ9UBK2 SNORA71.1-201ENST00000364523 117 ntBASIC3.13□□□□□ -1.91
PPARGC1AQ9UBK2 Y_RNA.329-201ENST00000365209 107 ntBASIC3.13□□□□□ -1.91
PPARGC1AQ9UBK2 Y_RNA.361-201ENST00000365515 120 ntBASIC3.13□□□□□ -1.91
PPARGC1AQ9UBK2 PCNPP3-201ENST00000393579 471 ntBASIC3.13□□□□□ -1.91
PPARGC1AQ9UBK2 RN7SL20P-201ENST00000488827 297 ntBASIC3.13□□□□□ -1.91
PPARGC1AQ9UBK2 RNU5F-4P-201ENST00000516581 114 ntBASIC3.13□□□□□ -1.91
PPARGC1AQ9UBK2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.13□□□□□ -1.91
PPARGC1AQ9UBK2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.13□□□□□ -1.91
PPARGC1AQ9UBK2 AC005828.6-201ENST00000606610 232 ntBASIC3.13□□□□□ -1.91
PPARGC1AQ9UBK2 AC090517.3-201ENST00000625170 141 ntBASIC3.13□□□□□ -1.91
PPARGC1AQ9UBK2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PPARGC1AQ9UBK2 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.13□□□□□ -1.91
PPARGC1AQ9UBK2 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.12□□□□□ -1.91
PPARGC1AQ9UBK2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
PPARGC1AQ9UBK2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
PPARGC1AQ9UBK2 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PPARGC1AQ9UBK2 Y_RNA.262-201ENST00000364641 102 ntBASIC3.12□□□□□ -1.91
PPARGC1AQ9UBK2 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PPARGC1AQ9UBK2 MIR491-201ENST00000384877 84 ntBASIC3.12□□□□□ -1.91
PPARGC1AQ9UBK2 MIR548M-201ENST00000408260 86 ntBASIC3.12□□□□□ -1.91
PPARGC1AQ9UBK2 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.12□□□□□ -1.91
PPARGC1AQ9UBK2 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.12□□□□□ -1.91
PPARGC1AQ9UBK2 AC114982.1-201ENST00000469402 321 ntBASIC3.12□□□□□ -1.91
PPARGC1AQ9UBK2 AC140059.1-201ENST00000489238 361 ntBASIC3.12□□□□□ -1.91
PPARGC1AQ9UBK2 RNA5SP385-201ENST00000515947 110 ntBASIC3.12□□□□□ -1.91
PPARGC1AQ9UBK2 SCARNA3-201ENST00000517097 143 ntBASIC3.12□□□□□ -1.91
PPARGC1AQ9UBK2 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.12□□□□□ -1.91
PPARGC1AQ9UBK2 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PPARGC1AQ9UBK2 AL137100.2-201ENST00000555786 315 ntBASIC3.12□□□□□ -1.91
PPARGC1AQ9UBK2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.12□□□□□ -1.91
PPARGC1AQ9UBK2 MIR5692C2-201ENST00000577959 77 ntBASIC3.12□□□□□ -1.91
PPARGC1AQ9UBK2 MIR3145-201ENST00000580727 82 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 259.9 ms