Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 RNU6-221P-201ENST00000459541 99 ntBASIC0.61□□□□□ -2.31
SOD1P00441 SRRM1P2-201ENST00000464531 1192 ntBASIC0.61□□□□□ -2.31
SOD1P00441 MTCO3P38-201ENST00000468910 766 ntBASIC0.61□□□□□ -2.31
SOD1P00441 MTCO2P4-201ENST00000517968 247 ntBASIC0.61□□□□□ -2.31
SOD1P00441 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.61□□□□□ -2.31
SOD1P00441 MTND4P7-201ENST00000523876 130 ntBASIC0.61□□□□□ -2.31
SOD1P00441 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.61□□□□□ -2.31
SOD1P00441 AC004584.2-201ENST00000570407 410 ntBASIC0.61□□□□□ -2.31
SOD1P00441 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.61□□□□□ -2.31
SOD1P00441 AC008088.1-201ENST00000580993 280 ntBASIC0.61□□□□□ -2.31
SOD1P00441 Z94722.1-201ENST00000604328 474 ntBASIC0.61□□□□□ -2.31
SOD1P00441 SNRPGP20-201ENST00000604477 205 ntBASIC0.61□□□□□ -2.31
SOD1P00441 AC064836.2-201ENST00000609491 462 ntBASIC0.61□□□□□ -2.31
SOD1P00441 uc_338.34-201ENST00000617467 174 ntBASIC0.61□□□□□ -2.31
SOD1P00441 AC103705.1-201ENST00000619013 241 ntBASIC0.61□□□□□ -2.31
SOD1P00441 MIR8054-201ENST00000620877 86 ntBASIC0.61□□□□□ -2.31
SOD1P00441 AL513423.1-201ENST00000621695 132 ntBASIC0.61□□□□□ -2.31
SOD1P00441 snoZ196.1-201ENST00000625269 89 ntBASIC0.61□□□□□ -2.31
SOD1P00441 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
SOD1P00441 AC008163.1-202ENST00000636004 2889 ntBASIC0.6□□□□□ -2.31
SOD1P00441 RNU4-79P-201ENST00000362764 141 ntBASIC0.6□□□□□ -2.31
SOD1P00441 RNU6-82P-201ENST00000363970 107 ntBASIC0.6□□□□□ -2.31
SOD1P00441 RNA5SP499-201ENST00000363982 119 ntBASIC0.6□□□□□ -2.31
SOD1P00441 SNORA72.3-201ENST00000365074 132 ntBASIC0.6□□□□□ -2.31
SOD1P00441 RNU6-1329P-201ENST00000365664 107 ntBASIC0.6□□□□□ -2.31
SOD1P00441 RNU6-1103P-201ENST00000384150 107 ntBASIC0.6□□□□□ -2.31
SOD1P00441 RNU1-139P-201ENST00000391307 165 ntBASIC0.6□□□□□ -2.31
SOD1P00441 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
SOD1P00441 AL049545.1-201ENST00000401856 572 ntBASIC0.6□□□□□ -2.31
SOD1P00441 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.6□□□□□ -2.31
SOD1P00441 RNU6-57P-201ENST00000411348 103 ntBASIC0.6□□□□□ -2.31
SOD1P00441 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.6□□□□□ -2.31
SOD1P00441 AC008134.1-201ENST00000420943 193 ntBASIC0.6□□□□□ -2.31
SOD1P00441 MTCYBP8-201ENST00000422855 651 ntBASIC0.6□□□□□ -2.31
SOD1P00441 AC010154.1-201ENST00000425857 269 ntBASIC0.6□□□□□ -2.31
SOD1P00441 TIMM9P3-201ENST00000428659 274 ntBASIC0.6□□□□□ -2.31
SOD1P00441 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.6□□□□□ -2.31
SOD1P00441 MTCO2P18-201ENST00000457151 658 ntBASIC0.6□□□□□ -2.31
SOD1P00441 U8.21-201ENST00000459536 136 ntBASIC0.6□□□□□ -2.31
SOD1P00441 AC092991.1-201ENST00000477176 376 ntBASIC0.6□□□□□ -2.31
SOD1P00441 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.6□□□□□ -2.31
SOD1P00441 AF186996.7-201ENST00000492781 209 ntBASIC0.6□□□□□ -2.31
SOD1P00441 PSMC1P5-201ENST00000512850 177 ntBASIC0.6□□□□□ -2.31
SOD1P00441 RNU1-142P-201ENST00000516682 145 ntBASIC0.6□□□□□ -2.31
SOD1P00441 RNU7-128P-201ENST00000517247 62 ntBASIC0.6□□□□□ -2.31
SOD1P00441 AC087683.1-201ENST00000591187 441 ntBASIC0.6□□□□□ -2.31
SOD1P00441 AC146944.4-201ENST00000602697 718 ntBASIC0.6□□□□□ -2.31
SOD1P00441 AL359075.3-201ENST00000613288 217 ntBASIC0.6□□□□□ -2.31
SOD1P00441 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.6□□□□□ -2.31
SOD1P00441 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.6□□□□□ -2.31
SOD1P00441 RNU6-1240P-201ENST00000365155 104 ntBASIC0.59□□□□□ -2.31
SOD1P00441 RNU6-996P-201ENST00000365438 107 ntBASIC0.59□□□□□ -2.31
SOD1P00441 RNU6-784P-201ENST00000384330 106 ntBASIC0.59□□□□□ -2.31
SOD1P00441 RNU6-505P-201ENST00000384427 107 ntBASIC0.59□□□□□ -2.31
SOD1P00441 MIR653-201ENST00000385279 96 ntBASIC0.59□□□□□ -2.31
SOD1P00441 RNA5SP323-201ENST00000391094 133 ntBASIC0.59□□□□□ -2.31
SOD1P00441 MIR1253-201ENST00000408273 105 ntBASIC0.59□□□□□ -2.31
SOD1P00441 RNA5SP504-201ENST00000410676 117 ntBASIC0.59□□□□□ -2.31
SOD1P00441 MTND3P9-201ENST00000429526 346 ntBASIC0.59□□□□□ -2.31
SOD1P00441 AL445567.1-201ENST00000439121 144 ntBASIC0.59□□□□□ -2.31
SOD1P00441 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.59□□□□□ -2.31
SOD1P00441 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.59□□□□□ -2.31
SOD1P00441 SNORA31.4-201ENST00000516049 129 ntBASIC0.59□□□□□ -2.31
SOD1P00441 RN7SKP287-201ENST00000516546 266 ntBASIC0.59□□□□□ -2.31
SOD1P00441 RNU6-430P-201ENST00000517078 107 ntBASIC0.59□□□□□ -2.31
SOD1P00441 AC087854.1-201ENST00000519706 414 ntBASIC0.59□□□□□ -2.31
SOD1P00441 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.59□□□□□ -2.31
SOD1P00441 MRPS36P4-201ENST00000534436 298 ntBASIC0.59□□□□□ -2.31
SOD1P00441 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.59□□□□□ -2.31
SOD1P00441 CPDP1-201ENST00000579660 283 ntBASIC0.59□□□□□ -2.31
SOD1P00441 AC008536.2-201ENST00000607284 349 ntBASIC0.59□□□□□ -2.31
SOD1P00441 AC087683.2-201ENST00000611384 326 ntBASIC0.59□□□□□ -2.31
SOD1P00441 AL603755.1-201ENST00000619504 163 ntBASIC0.59□□□□□ -2.31
SOD1P00441 SCARNA4-201ENST00000629045 128 ntBASIC0.59□□□□□ -2.31
SOD1P00441 Y_RNA.118-201ENST00000363300 101 ntBASIC0.58□□□□□ -2.32
SOD1P00441 Y_RNA.201-201ENST00000364052 96 ntBASIC0.58□□□□□ -2.32
SOD1P00441 RNU5A-6P-201ENST00000384136 116 ntBASIC0.58□□□□□ -2.32
SOD1P00441 RNA5SP219-201ENST00000390940 113 ntBASIC0.58□□□□□ -2.32
SOD1P00441 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
SOD1P00441 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.58□□□□□ -2.32
SOD1P00441 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.58□□□□□ -2.32
SOD1P00441 AC114482.1-201ENST00000418010 247 ntBASIC0.58□□□□□ -2.32
SOD1P00441 AC002429.1-201ENST00000437672 148 ntBASIC0.58□□□□□ -2.32
SOD1P00441 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.58□□□□□ -2.32
SOD1P00441 RNU7-63P-201ENST00000459054 62 ntBASIC0.58□□□□□ -2.32
SOD1P00441 RNU6-1132P-201ENST00000459214 107 ntBASIC0.58□□□□□ -2.32
SOD1P00441 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.58□□□□□ -2.32
SOD1P00441 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.58□□□□□ -2.32
SOD1P00441 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.58□□□□□ -2.32
SOD1P00441 SNORA31.2-201ENST00000516019 134 ntBASIC0.58□□□□□ -2.32
SOD1P00441 SNORD79.1-201ENST00000516069 84 ntBASIC0.58□□□□□ -2.32
SOD1P00441 RNU6-189P-201ENST00000516120 101 ntBASIC0.58□□□□□ -2.32
SOD1P00441 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.58□□□□□ -2.32
SOD1P00441 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.58□□□□□ -2.32
SOD1P00441 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.58□□□□□ -2.32
SOD1P00441 AC004817.2-201ENST00000561794 651 ntBASIC0.58□□□□□ -2.32
SOD1P00441 AC093424.1-201ENST00000604999 338 ntBASIC0.58□□□□□ -2.32
SOD1P00441 GHRLOS.1-201ENST00000610995 70 ntBASIC0.58□□□□□ -2.32
SOD1P00441 RMST_3.1-201ENST00000611651 109 ntBASIC0.58□□□□□ -2.32
SOD1P00441 AC137590.2-201ENST00000619709 240 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 239.2 ms