Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 RNU7-125P-201ENST00000458760 62 ntBASIC0.45□□□□□ -2.34
SCN2BO60939 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.45□□□□□ -2.34
SCN2BO60939 CCDC34P1-201ENST00000507441 517 ntBASIC0.45□□□□□ -2.34
SCN2BO60939 RNU6-1223P-201ENST00000517124 104 ntBASIC0.45□□□□□ -2.34
SCN2BO60939 RNU7-128P-201ENST00000517247 62 ntBASIC0.45□□□□□ -2.34
SCN2BO60939 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.45□□□□□ -2.34
SCN2BO60939 MIR3913-1-201ENST00000577744 102 ntBASIC0.45□□□□□ -2.34
SCN2BO60939 MTND1P15-201ENST00000579262 949 ntBASIC0.45□□□□□ -2.34
SCN2BO60939 AC025627.3-201ENST00000582078 182 ntBASIC0.45□□□□□ -2.34
SCN2BO60939 MIR98-201ENST00000606724 119 ntBASIC0.45□□□□□ -2.34
SCN2BO60939 AL360219.1-201ENST00000610230 366 ntBASIC0.45□□□□□ -2.34
SCN2BO60939 MIR6734-201ENST00000621166 68 ntBASIC0.45□□□□□ -2.34
SCN2BO60939 AC139792.3-201ENST00000623525 224 ntBASIC0.45□□□□□ -2.34
SCN2BO60939 SNORA2.2-201ENST00000365473 135 ntBASIC0.44□□□□□ -2.34
SCN2BO60939 SNORD116-13-201ENST00000384408 92 ntBASIC0.44□□□□□ -2.34
SCN2BO60939 RNA5SP504-201ENST00000410676 117 ntBASIC0.44□□□□□ -2.34
SCN2BO60939 RNA5SP247-201ENST00000411181 105 ntBASIC0.44□□□□□ -2.34
SCN2BO60939 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.44□□□□□ -2.34
SCN2BO60939 AC114737.2-201ENST00000421583 173 ntBASIC0.44□□□□□ -2.34
SCN2BO60939 MTND3P9-201ENST00000429526 346 ntBASIC0.44□□□□□ -2.34
SCN2BO60939 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.44□□□□□ -2.34
SCN2BO60939 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.44□□□□□ -2.34
SCN2BO60939 AC005178.1-201ENST00000508392 440 ntBASIC0.44□□□□□ -2.34
SCN2BO60939 RNA5SP220-201ENST00000516298 104 ntBASIC0.44□□□□□ -2.34
SCN2BO60939 AC025647.1-201ENST00000517879 253 ntBASIC0.44□□□□□ -2.34
SCN2BO60939 AP003461.1-201ENST00000528866 78 ntBASIC0.44□□□□□ -2.34
SCN2BO60939 AC068790.2-201ENST00000602601 557 ntBASIC0.44□□□□□ -2.34
SCN2BO60939 AC025449.1-201ENST00000603896 529 ntBASIC0.44□□□□□ -2.34
SCN2BO60939 AC064836.2-201ENST00000609491 462 ntBASIC0.44□□□□□ -2.34
SCN2BO60939 AC004223.4-201ENST00000612426 332 ntBASIC0.44□□□□□ -2.34
SCN2BO60939 RNU6-108P-201ENST00000365558 107 ntBASIC0.43□□□□□ -2.34
SCN2BO60939 RNU4-48P-201ENST00000365559 182 ntBASIC0.43□□□□□ -2.34
SCN2BO60939 SNORA67.2-201ENST00000384300 149 ntBASIC0.43□□□□□ -2.34
SCN2BO60939 SNORA40.3-201ENST00000390964 122 ntBASIC0.43□□□□□ -2.34
SCN2BO60939 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.43□□□□□ -2.34
SCN2BO60939 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
SCN2BO60939 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.43□□□□□ -2.34
SCN2BO60939 AC098934.3-201ENST00000430450 190 ntBASIC0.43□□□□□ -2.34
SCN2BO60939 AL035398.1-201ENST00000430869 322 ntBASIC0.43□□□□□ -2.34
SCN2BO60939 AL445305.1-201ENST00000432577 575 ntBASIC0.43□□□□□ -2.34
SCN2BO60939 AF186996.7-201ENST00000492781 209 ntBASIC0.43□□□□□ -2.34
SCN2BO60939 BNIP3P39-201ENST00000601077 554 ntBASIC0.43□□□□□ -2.34
SCN2BO60939 PRELID3BP2-201ENST00000605362 201 ntBASIC0.43□□□□□ -2.34
SCN2BO60939 AC005014.3-201ENST00000605985 190 ntBASIC0.43□□□□□ -2.34
SCN2BO60939 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
SCN2BO60939 AP000568.1-201ENST00000282964 442 ntBASIC0.42□□□□□ -2.34
SCN2BO60939 RNU5B-2P-201ENST00000363036 113 ntBASIC0.42□□□□□ -2.34
SCN2BO60939 Y_RNA.238-201ENST00000364441 102 ntBASIC0.42□□□□□ -2.34
SCN2BO60939 Y_RNA.399-201ENST00000383955 105 ntBASIC0.42□□□□□ -2.34
SCN2BO60939 MIR1287-201ENST00000408492 90 ntBASIC0.42□□□□□ -2.34
SCN2BO60939 MTCYBP8-201ENST00000422855 651 ntBASIC0.42□□□□□ -2.34
SCN2BO60939 CYCSP46-201ENST00000423569 204 ntBASIC0.42□□□□□ -2.34
SCN2BO60939 AC092423.1-201ENST00000430165 186 ntBASIC0.42□□□□□ -2.34
SCN2BO60939 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.42□□□□□ -2.34
SCN2BO60939 MTCO2P7-201ENST00000446518 666 ntBASIC0.42□□□□□ -2.34
SCN2BO60939 SNRPGP9-201ENST00000456025 225 ntBASIC0.42□□□□□ -2.34
SCN2BO60939 LINC01399-202ENST00000458450 244 ntBASIC0.42□□□□□ -2.34
SCN2BO60939 RNU6-221P-201ENST00000459541 99 ntBASIC0.42□□□□□ -2.34
SCN2BO60939 AL049830.1-201ENST00000468034 425 ntBASIC0.42□□□□□ -2.34
SCN2BO60939 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.42□□□□□ -2.34
SCN2BO60939 RNU6-1038P-201ENST00000516516 104 ntBASIC0.42□□□□□ -2.34
SCN2BO60939 AK6P2-201ENST00000549020 471 ntBASIC0.42□□□□□ -2.34
SCN2BO60939 FRG2DP-202ENST00000566967 323 ntBASIC0.42□□□□□ -2.34
SCN2BO60939 AC008873.1-201ENST00000625051 138 ntBASIC0.42□□□□□ -2.34
SCN2BO60939 MIR5087-201ENST00000635826 76 ntBASIC0.42□□□□□ -2.34
SCN2BO60939 MTND4P4-201ENST00000439033 1366 ntBASIC0.42□□□□□ -2.34
SCN2BO60939 RNU6-227P-201ENST00000362865 103 ntBASIC0.41□□□□□ -2.34
SCN2BO60939 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
SCN2BO60939 Y_RNA.226-201ENST00000364337 114 ntBASIC0.41□□□□□ -2.34
SCN2BO60939 RNU6-456P-201ENST00000384493 107 ntBASIC0.41□□□□□ -2.34
SCN2BO60939 RNU6-925P-201ENST00000384629 104 ntBASIC0.41□□□□□ -2.34
SCN2BO60939 RNU6-903P-201ENST00000391270 109 ntBASIC0.41□□□□□ -2.34
SCN2BO60939 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.41□□□□□ -2.34
SCN2BO60939 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.41□□□□□ -2.34
SCN2BO60939 AC093850.1-201ENST00000454121 251 ntBASIC0.41□□□□□ -2.34
SCN2BO60939 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.41□□□□□ -2.34
SCN2BO60939 AC007215.1-201ENST00000464893 276 ntBASIC0.41□□□□□ -2.34
SCN2BO60939 RNU6-1129P-201ENST00000515964 104 ntBASIC0.41□□□□□ -2.34
SCN2BO60939 RNU6-917P-201ENST00000516294 104 ntBASIC0.41□□□□□ -2.34
SCN2BO60939 RNU6-612P-201ENST00000516909 102 ntBASIC0.41□□□□□ -2.34
SCN2BO60939 AC104576.1-201ENST00000524225 88 ntBASIC0.41□□□□□ -2.34
SCN2BO60939 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.41□□□□□ -2.34
SCN2BO60939 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.41□□□□□ -2.34
SCN2BO60939 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.41□□□□□ -2.34
SCN2BO60939 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.41□□□□□ -2.34
SCN2BO60939 RNU6-181P-201ENST00000363225 107 ntBASIC0.4□□□□□ -2.35
SCN2BO60939 RNU6-1317P-201ENST00000364582 104 ntBASIC0.4□□□□□ -2.35
SCN2BO60939 MIR10B-201ENST00000385011 110 ntBASIC0.4□□□□□ -2.35
SCN2BO60939 SNORA75.2-201ENST00000391138 150 ntBASIC0.4□□□□□ -2.35
SCN2BO60939 SNORA75.3-201ENST00000391231 150 ntBASIC0.4□□□□□ -2.35
SCN2BO60939 RNU6-248P-201ENST00000410720 107 ntBASIC0.4□□□□□ -2.35
SCN2BO60939 AL358934.1-201ENST00000432346 324 ntBASIC0.4□□□□□ -2.35
SCN2BO60939 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.4□□□□□ -2.35
SCN2BO60939 STAG3L5P-204ENST00000443759 179 ntBASIC0.4□□□□□ -2.35
SCN2BO60939 USP9YP29-201ENST00000445112 563 ntBASIC0.4□□□□□ -2.35
SCN2BO60939 TPT1P7-201ENST00000458300 517 ntBASIC0.4□□□□□ -2.35
SCN2BO60939 U7.7-201ENST00000459276 60 ntBASIC0.4□□□□□ -2.35
SCN2BO60939 RNU6-1037P-201ENST00000459571 107 ntBASIC0.4□□□□□ -2.35
SCN2BO60939 AC105417.1-201ENST00000514691 285 ntBASIC0.4□□□□□ -2.35
SCN2BO60939 RNU4-57P-201ENST00000515980 135 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 193.7 ms