Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SNORD45.3-201ENST00000363836 72 ntBASIC3.11□□□□□ -1.91
SHISA3A0PJX4 RPL21P65-201ENST00000406094 466 ntBASIC3.11□□□□□ -1.91
SHISA3A0PJX4 U6atac.2-201ENST00000408644 118 ntBASIC3.11□□□□□ -1.91
SHISA3A0PJX4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.11□□□□□ -1.91
SHISA3A0PJX4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.11□□□□□ -1.91
SHISA3A0PJX4 AC016717.1-201ENST00000448918 286 ntBASIC3.11□□□□□ -1.91
SHISA3A0PJX4 U3.44-201ENST00000458938 192 ntBASIC3.11□□□□□ -1.91
SHISA3A0PJX4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.11□□□□□ -1.91
SHISA3A0PJX4 AC026402.1-201ENST00000513642 170 ntBASIC3.11□□□□□ -1.91
SHISA3A0PJX4 AC104027.1-201ENST00000521887 300 ntBASIC3.11□□□□□ -1.91
SHISA3A0PJX4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.11□□□□□ -1.91
SHISA3A0PJX4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.11□□□□□ -1.91
SHISA3A0PJX4 MIR6500-201ENST00000622700 86 ntBASIC3.11□□□□□ -1.91
SHISA3A0PJX4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
SHISA3A0PJX4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
SHISA3A0PJX4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.11□□□□□ -1.91
SHISA3A0PJX4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.11□□□□□ -1.91
SHISA3A0PJX4 AC093908.1-201ENST00000623125 8092 ntBASIC3.1□□□□□ -1.91
SHISA3A0PJX4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
SHISA3A0PJX4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SHISA3A0PJX4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHISA3A0PJX4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SHISA3A0PJX4 RNU6-834P-201ENST00000362367 110 ntBASIC3.1□□□□□ -1.91
SHISA3A0PJX4 RNU6-215P-201ENST00000365169 102 ntBASIC3.1□□□□□ -1.91
SHISA3A0PJX4 RNU6-438P-201ENST00000365561 103 ntBASIC3.1□□□□□ -1.91
SHISA3A0PJX4 RN7SKP202-201ENST00000410439 330 ntBASIC3.1□□□□□ -1.91
SHISA3A0PJX4 AL353705.1-201ENST00000433468 480 ntBASIC3.1□□□□□ -1.91
SHISA3A0PJX4 RPS12P18-201ENST00000442381 270 ntBASIC3.1□□□□□ -1.91
SHISA3A0PJX4 AL357552.1-201ENST00000445254 415 ntBASIC3.1□□□□□ -1.91
SHISA3A0PJX4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.1□□□□□ -1.91
SHISA3A0PJX4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.1□□□□□ -1.91
SHISA3A0PJX4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.1□□□□□ -1.91
SHISA3A0PJX4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.1□□□□□ -1.91
SHISA3A0PJX4 AL160236.1-201ENST00000556317 195 ntBASIC3.1□□□□□ -1.91
SHISA3A0PJX4 U7.2-201ENST00000607576 63 ntBASIC3.1□□□□□ -1.91
SHISA3A0PJX4 AL021707.8-201ENST00000609428 183 ntBASIC3.1□□□□□ -1.91
SHISA3A0PJX4 AC011603.4-201ENST00000611325 277 ntBASIC3.1□□□□□ -1.91
SHISA3A0PJX4 AC096577.2-201ENST00000611455 153 ntBASIC3.1□□□□□ -1.91
SHISA3A0PJX4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SHISA3A0PJX4 RNA5SP196-201ENST00000625967 102 ntBASIC3.1□□□□□ -1.91
SHISA3A0PJX4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.1□□□□□ -1.91
SHISA3A0PJX4 ZNF702P-202ENST00000434269 1966 ntBASIC3.1□□□□□ -1.91
SHISA3A0PJX4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHISA3A0PJX4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHISA3A0PJX4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHISA3A0PJX4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHISA3A0PJX4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
SHISA3A0PJX4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SHISA3A0PJX4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHISA3A0PJX4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
SHISA3A0PJX4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SHISA3A0PJX4 RNU6-1240P-201ENST00000365155 104 ntBASIC3.09□□□□□ -1.91
SHISA3A0PJX4 RNU6-117P-201ENST00000365415 107 ntBASIC3.09□□□□□ -1.91
SHISA3A0PJX4 AL139247.1-201ENST00000422768 325 ntBASIC3.09□□□□□ -1.91
SHISA3A0PJX4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.09□□□□□ -1.91
SHISA3A0PJX4 AC017083.1-201ENST00000428093 483 ntBASIC3.09□□□□□ -1.91
SHISA3A0PJX4 AL117339.2-201ENST00000430475 180 ntBASIC3.09□□□□□ -1.91
SHISA3A0PJX4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.91
SHISA3A0PJX4 RNU2-27P-201ENST00000516185 142 ntBASIC3.09□□□□□ -1.91
SHISA3A0PJX4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.09□□□□□ -1.91
SHISA3A0PJX4 SCARNA3-201ENST00000517097 143 ntBASIC3.09□□□□□ -1.91
SHISA3A0PJX4 AP001328.1-201ENST00000528550 176 ntBASIC3.09□□□□□ -1.91
SHISA3A0PJX4 MIR378D2-201ENST00000580636 98 ntBASIC3.09□□□□□ -1.91
SHISA3A0PJX4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.09□□□□□ -1.91
SHISA3A0PJX4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHISA3A0PJX4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SHISA3A0PJX4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.09□□□□□ -1.92
SHISA3A0PJX4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SHISA3A0PJX4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SHISA3A0PJX4 RNU4-13P-201ENST00000364019 141 ntBASIC3.08□□□□□ -1.92
SHISA3A0PJX4 RNU4-41P-201ENST00000364426 143 ntBASIC3.08□□□□□ -1.92
SHISA3A0PJX4 RNU6-1180P-201ENST00000364935 107 ntBASIC3.08□□□□□ -1.92
SHISA3A0PJX4 SNORA72-201ENST00000384339 132 ntBASIC3.08□□□□□ -1.92
SHISA3A0PJX4 SNORD20-201ENST00000384550 80 ntBASIC3.08□□□□□ -1.92
SHISA3A0PJX4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SHISA3A0PJX4 Y_RNA.622-201ENST00000411091 108 ntBASIC3.08□□□□□ -1.92
SHISA3A0PJX4 AC093578.1-201ENST00000415219 368 ntBASIC3.08□□□□□ -1.92
SHISA3A0PJX4 RPL30P4-201ENST00000429309 333 ntBASIC3.08□□□□□ -1.92
SHISA3A0PJX4 AC009969.1-201ENST00000438726 172 ntBASIC3.08□□□□□ -1.92
SHISA3A0PJX4 SNRPGP8-201ENST00000454064 226 ntBASIC3.08□□□□□ -1.92
SHISA3A0PJX4 RN7SL594P-201ENST00000470590 287 ntBASIC3.08□□□□□ -1.92
SHISA3A0PJX4 RNU4-57P-201ENST00000515980 135 ntBASIC3.08□□□□□ -1.92
SHISA3A0PJX4 RNU6-197P-201ENST00000516680 100 ntBASIC3.08□□□□□ -1.92
SHISA3A0PJX4 AC107934.2-201ENST00000518653 310 ntBASIC3.08□□□□□ -1.92
SHISA3A0PJX4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.08□□□□□ -1.92
SHISA3A0PJX4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.08□□□□□ -1.92
SHISA3A0PJX4 AC015720.1-201ENST00000565251 277 ntBASIC3.08□□□□□ -1.92
SHISA3A0PJX4 AC105245.1-201ENST00000581934 244 ntBASIC3.08□□□□□ -1.92
SHISA3A0PJX4 AC107294.3-201ENST00000609211 526 ntBASIC3.08□□□□□ -1.92
SHISA3A0PJX4 AC002064.3-201ENST00000623448 346 ntBASIC3.08□□□□□ -1.92
SHISA3A0PJX4 AC034229.5-201ENST00000624258 185 ntBASIC3.08□□□□□ -1.92
SHISA3A0PJX4 MIR7153-201ENST00000637758 57 ntBASIC3.08□□□□□ -1.92
SHISA3A0PJX4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.08□□□□□ -1.92
SHISA3A0PJX4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
SHISA3A0PJX4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SHISA3A0PJX4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SHISA3A0PJX4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.07□□□□□ -1.92
SHISA3A0PJX4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SHISA3A0PJX4 MIR372-201ENST00000362225 67 ntBASIC3.07□□□□□ -1.92
SHISA3A0PJX4 Y_RNA.251-201ENST00000364551 99 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 250.9 ms