Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.31□□□□□ -2.2
ITCHQ96J02 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.31□□□□□ -2.2
ITCHQ96J02 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
ITCHQ96J02 Y_RNA.151-201ENST00000363566 112 ntBASIC1.31□□□□□ -2.2
ITCHQ96J02 RNU6-1090P-201ENST00000364065 94 ntBASIC1.31□□□□□ -2.2
ITCHQ96J02 RNU6-790P-201ENST00000384479 105 ntBASIC1.31□□□□□ -2.2
ITCHQ96J02 MIR520A-201ENST00000384862 85 ntBASIC1.31□□□□□ -2.2
ITCHQ96J02 MIR758-201ENST00000390227 88 ntBASIC1.31□□□□□ -2.2
ITCHQ96J02 AC004866.1-201ENST00000411748 78 ntBASIC1.31□□□□□ -2.2
ITCHQ96J02 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.31□□□□□ -2.2
ITCHQ96J02 AC245047.4-201ENST00000433189 144 ntBASIC1.31□□□□□ -2.2
ITCHQ96J02 UBE2V1P8-201ENST00000437166 265 ntBASIC1.31□□□□□ -2.2
ITCHQ96J02 MTCO3P18-201ENST00000440206 761 ntBASIC1.31□□□□□ -2.2
ITCHQ96J02 NFU1P2-201ENST00000448700 469 ntBASIC1.31□□□□□ -2.2
ITCHQ96J02 RPL23AP75-201ENST00000491601 451 ntBASIC1.31□□□□□ -2.2
ITCHQ96J02 AC109635.3-201ENST00000529536 185 ntBASIC1.31□□□□□ -2.2
ITCHQ96J02 RRN3P3-201ENST00000549207 578 ntBASIC1.31□□□□□ -2.2
ITCHQ96J02 SNRPGP20-201ENST00000604477 205 ntBASIC1.31□□□□□ -2.2
ITCHQ96J02 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.31□□□□□ -2.2
ITCHQ96J02 AL138726.1-201ENST00000614873 333 ntBASIC1.31□□□□□ -2.2
ITCHQ96J02 SCARNA4-201ENST00000629045 128 ntBASIC1.31□□□□□ -2.2
ITCHQ96J02 MTND4P5-201ENST00000435821 1374 ntBASIC1.31□□□□□ -2.2
ITCHQ96J02 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
ITCHQ96J02 BX322639.1-202ENST00000423987 2213 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 AC010615.1-201ENST00000594254 1764 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 SNORD50.1-201ENST00000362987 71 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 RNU4-13P-201ENST00000364019 141 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 RNU1-96P-201ENST00000364163 162 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 RNU6-975P-201ENST00000384296 105 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 RNU6-95P-201ENST00000384697 107 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 MIR181A1-201ENST00000385026 110 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 RNU6-332P-201ENST00000391193 108 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 AL117342.1-201ENST00000404861 406 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 MIR320B2-201ENST00000408479 138 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.3□□□□□ -2.2
ITCHQ96J02 ZNF885P-201ENST00000420174 1098 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.3□□□□□ -2.2
ITCHQ96J02 AC060773.1-201ENST00000421698 310 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 AL590632.1-201ENST00000424289 371 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.3□□□□□ -2.2
ITCHQ96J02 PCMTD1P1-201ENST00000455560 355 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 MTND1P11-201ENST00000456661 876 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 snoU13.30-201ENST00000458951 104 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 AC114982.1-201ENST00000469402 321 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 HMGN2P9-201ENST00000476875 229 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 AC011406.1-201ENST00000512440 370 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 RNU6-948P-201ENST00000516374 107 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 RNU6-256P-201ENST00000516747 97 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.3□□□□□ -2.2
ITCHQ96J02 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.3□□□□□ -2.2
ITCHQ96J02 SNORA77B-201ENST00000578179 125 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 MIR4303-201ENST00000581299 66 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 AL353149.1-201ENST00000610667 244 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.3□□□□□ -2.2
ITCHQ96J02 MIR302D-201ENST00000362275 68 ntBASIC1.29□□□□□ -2.2
ITCHQ96J02 Y_RNA.100-201ENST00000363141 102 ntBASIC1.29□□□□□ -2.2
ITCHQ96J02 Y_RNA.116-201ENST00000363292 103 ntBASIC1.29□□□□□ -2.2
ITCHQ96J02 RNU6-414P-201ENST00000363705 104 ntBASIC1.29□□□□□ -2.2
ITCHQ96J02 RNU6-1019P-201ENST00000364424 107 ntBASIC1.29□□□□□ -2.2
ITCHQ96J02 Y_RNA.402-201ENST00000383972 102 ntBASIC1.29□□□□□ -2.2
ITCHQ96J02 RNU6-203P-201ENST00000384038 104 ntBASIC1.29□□□□□ -2.2
ITCHQ96J02 RNU6-1235P-201ENST00000384559 107 ntBASIC1.29□□□□□ -2.2
ITCHQ96J02 EBAG9P1-201ENST00000418955 543 ntBASIC1.29□□□□□ -2.2
ITCHQ96J02 AC016717.1-201ENST00000448918 286 ntBASIC1.29□□□□□ -2.2
ITCHQ96J02 AC079354.2-201ENST00000453523 154 ntBASIC1.29□□□□□ -2.2
ITCHQ96J02 RPS29P23-201ENST00000458635 123 ntBASIC1.29□□□□□ -2.2
ITCHQ96J02 RNU6-498P-201ENST00000459468 107 ntBASIC1.29□□□□□ -2.2
ITCHQ96J02 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.29□□□□□ -2.2
ITCHQ96J02 HMGN1P13-201ENST00000505795 138 ntBASIC1.29□□□□□ -2.2
ITCHQ96J02 RNA5SP384-201ENST00000516615 116 ntBASIC1.29□□□□□ -2.2
ITCHQ96J02 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ITCHQ96J02 SUB1P3-201ENST00000564581 315 ntBASIC1.29□□□□□ -2.2
ITCHQ96J02 AC068338.1-201ENST00000565567 176 ntBASIC1.29□□□□□ -2.2
ITCHQ96J02 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.29□□□□□ -2.2
ITCHQ96J02 POLR3GP2-201ENST00000588366 668 ntBASIC1.29□□□□□ -2.2
ITCHQ96J02 AC024614.3-201ENST00000637860 256 ntBASIC1.29□□□□□ -2.2
ITCHQ96J02 ZNF204P-201ENST00000416749 2397 ntBASIC1.28□□□□□ -2.2
ITCHQ96J02 AL161722.3-201ENST00000605789 2983 ntBASIC1.28□□□□□ -2.2
ITCHQ96J02 Y_RNA.67-201ENST00000362870 100 ntBASIC1.28□□□□□ -2.2
ITCHQ96J02 RNU6-623P-201ENST00000363143 105 ntBASIC1.28□□□□□ -2.2
ITCHQ96J02 Y_RNA.122-201ENST00000363331 96 ntBASIC1.28□□□□□ -2.2
ITCHQ96J02 Y_RNA.414-201ENST00000384011 101 ntBASIC1.28□□□□□ -2.2
ITCHQ96J02 Y_RNA.466-201ENST00000384294 113 ntBASIC1.28□□□□□ -2.2
ITCHQ96J02 MIR487A-201ENST00000385009 80 ntBASIC1.28□□□□□ -2.2
ITCHQ96J02 MIR586-201ENST00000385035 97 ntBASIC1.28□□□□□ -2.2
ITCHQ96J02 MIR518E-201ENST00000385252 88 ntBASIC1.28□□□□□ -2.2
ITCHQ96J02 SNORA67.5-201ENST00000391036 107 ntBASIC1.28□□□□□ -2.2
ITCHQ96J02 MIR1267-201ENST00000408723 78 ntBASIC1.28□□□□□ -2.2
ITCHQ96J02 RNU2-7P-201ENST00000410794 178 ntBASIC1.28□□□□□ -2.2
ITCHQ96J02 CST2P1-201ENST00000425770 87 ntBASIC1.28□□□□□ -2.2
ITCHQ96J02 C8orf59P1-201ENST00000429930 303 ntBASIC1.28□□□□□ -2.2
ITCHQ96J02 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.28□□□□□ -2.2
ITCHQ96J02 HSPE1P9-201ENST00000440046 311 ntBASIC1.28□□□□□ -2.2
ITCHQ96J02 AC092473.1-201ENST00000441098 221 ntBASIC1.28□□□□□ -2.2
ITCHQ96J02 DAP3P1-201ENST00000441522 278 ntBASIC1.28□□□□□ -2.2
ITCHQ96J02 RPS29P29-201ENST00000456396 171 ntBASIC1.28□□□□□ -2.2
ITCHQ96J02 MTCO2P30-201ENST00000503662 364 ntBASIC1.28□□□□□ -2.2
ITCHQ96J02 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.28□□□□□ -2.2
ITCHQ96J02 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.28□□□□□ -2.2
ITCHQ96J02 RNA5SP437-201ENST00000517249 129 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms