Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 SNORA48.11-201ENST00000517015 89 ntBASIC1.83□□□□□ -2.12
PHF1O43189 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.83□□□□□ -2.12
PHF1O43189 snoU13.31-201ENST00000607291 104 ntBASIC1.83□□□□□ -2.12
PHF1O43189 AC100812.1-201ENST00000607622 580 ntBASIC1.83□□□□□ -2.12
PHF1O43189 AC087588.2-201ENST00000617667 426 ntBASIC1.83□□□□□ -2.12
PHF1O43189 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.83□□□□□ -2.12
PHF1O43189 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
PHF1O43189 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
PHF1O43189 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
PHF1O43189 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.82□□□□□ -2.12
PHF1O43189 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.82□□□□□ -2.12
PHF1O43189 Y_RNA.796-201ENST00000364268 102 ntBASIC1.82□□□□□ -2.12
PHF1O43189 RNU6-99P-201ENST00000364721 107 ntBASIC1.82□□□□□ -2.12
PHF1O43189 Y_RNA.799-201ENST00000364992 102 ntBASIC1.82□□□□□ -2.12
PHF1O43189 RNU6-378P-201ENST00000384324 107 ntBASIC1.82□□□□□ -2.12
PHF1O43189 MIR499A-201ENST00000384903 122 ntBASIC1.82□□□□□ -2.12
PHF1O43189 MIR153-2-201ENST00000385225 87 ntBASIC1.82□□□□□ -2.12
PHF1O43189 RNU6-700P-201ENST00000391043 107 ntBASIC1.82□□□□□ -2.12
PHF1O43189 RNU1-139P-201ENST00000391307 165 ntBASIC1.82□□□□□ -2.12
PHF1O43189 MIR190B-201ENST00000401119 79 ntBASIC1.82□□□□□ -2.12
PHF1O43189 MIR1302-11-201ENST00000408051 138 ntBASIC1.82□□□□□ -2.12
PHF1O43189 MIR548P-201ENST00000408336 84 ntBASIC1.82□□□□□ -2.12
PHF1O43189 MIR1302-9-201ENST00000408365 138 ntBASIC1.82□□□□□ -2.12
PHF1O43189 MIR1302-10-201ENST00000408734 138 ntBASIC1.82□□□□□ -2.12
PHF1O43189 RNU2-40P-201ENST00000410833 196 ntBASIC1.82□□□□□ -2.12
PHF1O43189 AC108667.1-201ENST00000428618 249 ntBASIC1.82□□□□□ -2.12
PHF1O43189 AL035666.1-201ENST00000446195 348 ntBASIC1.82□□□□□ -2.12
PHF1O43189 AC055731.1-201ENST00000474387 401 ntBASIC1.82□□□□□ -2.12
PHF1O43189 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.82□□□□□ -2.12
PHF1O43189 AC140059.1-201ENST00000489238 361 ntBASIC1.82□□□□□ -2.12
PHF1O43189 AC145146.1-201ENST00000496370 254 ntBASIC1.82□□□□□ -2.12
PHF1O43189 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.82□□□□□ -2.12
PHF1O43189 RNU6-1153P-201ENST00000516760 105 ntBASIC1.82□□□□□ -2.12
PHF1O43189 RNU1-40P-201ENST00000516816 164 ntBASIC1.82□□□□□ -2.12
PHF1O43189 RNU1-97P-201ENST00000516872 164 ntBASIC1.82□□□□□ -2.12
PHF1O43189 SNORA31.25-201ENST00000517242 134 ntBASIC1.82□□□□□ -2.12
PHF1O43189 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.82□□□□□ -2.12
PHF1O43189 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
PHF1O43189 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.82□□□□□ -2.12
PHF1O43189 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.82□□□□□ -2.12
PHF1O43189 MIR1302-2-201ENST00000607096 138 ntBASIC1.82□□□□□ -2.12
PHF1O43189 AL355802.3-201ENST00000607571 545 ntBASIC1.82□□□□□ -2.12
PHF1O43189 AL162373.1-201ENST00000620433 407 ntBASIC1.82□□□□□ -2.12
PHF1O43189 MIR6132-201ENST00000622083 109 ntBASIC1.82□□□□□ -2.12
PHF1O43189 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
PHF1O43189 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.82□□□□□ -2.12
PHF1O43189 BX322639.1-202ENST00000423987 2213 ntBASIC1.81□□□□□ -2.12
PHF1O43189 snoU2_19.1-201ENST00000362361 80 ntBASIC1.81□□□□□ -2.12
PHF1O43189 Y_RNA.31-201ENST00000362574 102 ntBASIC1.81□□□□□ -2.12
PHF1O43189 Y_RNA.122-201ENST00000363331 96 ntBASIC1.81□□□□□ -2.12
PHF1O43189 RNU4-52P-201ENST00000384209 138 ntBASIC1.81□□□□□ -2.12
PHF1O43189 RNU6-1156P-201ENST00000410365 100 ntBASIC1.81□□□□□ -2.12
PHF1O43189 RNA5SP270-201ENST00000411361 118 ntBASIC1.81□□□□□ -2.12
PHF1O43189 HMGB3P2-201ENST00000411913 584 ntBASIC1.81□□□□□ -2.12
PHF1O43189 AC007098.1-201ENST00000420122 367 ntBASIC1.81□□□□□ -2.12
PHF1O43189 AC005534.2-201ENST00000431047 433 ntBASIC1.81□□□□□ -2.12
PHF1O43189 AL021397.1-201ENST00000451806 248 ntBASIC1.81□□□□□ -2.12
PHF1O43189 AC025033.1-201ENST00000463883 194 ntBASIC1.81□□□□□ -2.12
PHF1O43189 AC090515.1-201ENST00000465295 476 ntBASIC1.81□□□□□ -2.12
PHF1O43189 RNU6-264P-201ENST00000517134 104 ntBASIC1.81□□□□□ -2.12
PHF1O43189 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.81□□□□□ -2.12
PHF1O43189 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.81□□□□□ -2.12
PHF1O43189 EIF4A1P12-201ENST00000551910 141 ntBASIC1.81□□□□□ -2.12
PHF1O43189 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.81□□□□□ -2.12
PHF1O43189 MIR5739-201ENST00000619803 80 ntBASIC1.81□□□□□ -2.12
PHF1O43189 AC009831.4-201ENST00000620744 325 ntBASIC1.81□□□□□ -2.12
PHF1O43189 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
PHF1O43189 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
PHF1O43189 U3.9-201ENST00000363823 204 ntBASIC1.8□□□□□ -2.12
PHF1O43189 RNU6-944P-201ENST00000364023 107 ntBASIC1.8□□□□□ -2.12
PHF1O43189 RNU4-42P-201ENST00000364738 142 ntBASIC1.8□□□□□ -2.12
PHF1O43189 Y_RNA.364-201ENST00000365532 101 ntBASIC1.8□□□□□ -2.12
PHF1O43189 RNY1P14-201ENST00000384426 108 ntBASIC1.8□□□□□ -2.12
PHF1O43189 SNORA51.11-201ENST00000384442 131 ntBASIC1.8□□□□□ -2.12
PHF1O43189 MIR32-201ENST00000384965 70 ntBASIC1.8□□□□□ -2.12
PHF1O43189 MIR487A-201ENST00000385009 80 ntBASIC1.8□□□□□ -2.12
PHF1O43189 RNU6-159P-201ENST00000391080 106 ntBASIC1.8□□□□□ -2.12
PHF1O43189 RNU2-48P-201ENST00000410694 191 ntBASIC1.8□□□□□ -2.12
PHF1O43189 CYCSP49-201ENST00000420810 319 ntBASIC1.8□□□□□ -2.12
PHF1O43189 CBX3P6-201ENST00000430257 527 ntBASIC1.8□□□□□ -2.12
PHF1O43189 RPL23AP50-201ENST00000434149 455 ntBASIC1.8□□□□□ -2.12
PHF1O43189 AL161788.1-201ENST00000441805 169 ntBASIC1.8□□□□□ -2.12
PHF1O43189 RPL23AP7-203ENST00000449021 469 ntBASIC1.8□□□□□ -2.12
PHF1O43189 CHEK2P4-201ENST00000450340 246 ntBASIC1.8□□□□□ -2.12
PHF1O43189 AC105758.1-201ENST00000506038 399 ntBASIC1.8□□□□□ -2.12
PHF1O43189 RNU6-475P-201ENST00000516073 104 ntBASIC1.8□□□□□ -2.12
PHF1O43189 RNU6-911P-201ENST00000516523 104 ntBASIC1.8□□□□□ -2.12
PHF1O43189 Y_RNA.706-201ENST00000516933 99 ntBASIC1.8□□□□□ -2.12
PHF1O43189 RNU7-4P-201ENST00000516961 62 ntBASIC1.8□□□□□ -2.12
PHF1O43189 RNU6-58P-201ENST00000517143 103 ntBASIC1.8□□□□□ -2.12
PHF1O43189 RNU6-586P-201ENST00000517265 104 ntBASIC1.8□□□□□ -2.12
PHF1O43189 DEFB131C-201ENST00000528817 165 ntBASIC1.8□□□□□ -2.12
PHF1O43189 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.8□□□□□ -2.12
PHF1O43189 7SK.7-201ENST00000603504 247 ntBASIC1.8□□□□□ -2.12
PHF1O43189 AL138963.2-201ENST00000605137 226 ntBASIC1.8□□□□□ -2.12
PHF1O43189 MIR6845-201ENST00000613182 61 ntBASIC1.8□□□□□ -2.12
PHF1O43189 U4atac.1-201ENST00000618345 95 ntBASIC1.8□□□□□ -2.12
PHF1O43189 AP000553.5-201ENST00000641933 54 ntBASIC1.8□□□□□ -2.12
PHF1O43189 AL359851.1-201ENST00000569460 4997 ntBASIC1.8□□□□□ -2.12
PHF1O43189 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 463 ms