Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 ATP5J2P3-201ENST00000451550 258 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 RNU7-66P-201ENST00000459469 62 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 AL163540.1-201ENST00000485382 386 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 RPS23P5-201ENST00000495419 428 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 AC005840.1-201ENST00000498412 377 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 MTCYBP18-201ENST00000501056 747 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.43□□□□□ -2.18
NPAS2Q99743 Y_RNA.675-201ENST00000516389 149 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.43□□□□□ -2.18
NPAS2Q99743 AC090517.1-201ENST00000569307 266 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 AL359821.1-201ENST00000605519 182 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 AC090617.10-201ENST00000624308 134 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 AC068205.3-201ENST00000636385 468 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.43□□□□□ -2.18
NPAS2Q99743 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
NPAS2Q99743 AL159152.1-201ENST00000635019 2587 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 AP000648.3-201ENST00000623539 4507 ntBASIC1.43□□□□□ -2.18
NPAS2Q99743 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
NPAS2Q99743 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
NPAS2Q99743 RNU6-227P-201ENST00000362865 103 ntBASIC1.42□□□□□ -2.18
NPAS2Q99743 RNU6-534P-201ENST00000364877 106 ntBASIC1.42□□□□□ -2.18
NPAS2Q99743 Y_RNA.295-201ENST00000364918 102 ntBASIC1.42□□□□□ -2.18
NPAS2Q99743 RNU6-214P-201ENST00000384130 107 ntBASIC1.42□□□□□ -2.18
NPAS2Q99743 RNU6-360P-201ENST00000390944 104 ntBASIC1.42□□□□□ -2.18
NPAS2Q99743 AL590632.1-201ENST00000424289 371 ntBASIC1.42□□□□□ -2.18
NPAS2Q99743 USP9YP28-201ENST00000435142 589 ntBASIC1.42□□□□□ -2.18
NPAS2Q99743 NDUFA5P4-201ENST00000436704 385 ntBASIC1.42□□□□□ -2.18
NPAS2Q99743 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.42□□□□□ -2.18
NPAS2Q99743 AC245517.4-201ENST00000448601 281 ntBASIC1.42□□□□□ -2.18
NPAS2Q99743 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.42□□□□□ -2.18
NPAS2Q99743 snoU13.6-201ENST00000458785 104 ntBASIC1.42□□□□□ -2.18
NPAS2Q99743 AC010531.2-201ENST00000465012 153 ntBASIC1.42□□□□□ -2.18
NPAS2Q99743 RPL26P26-201ENST00000480251 434 ntBASIC1.42□□□□□ -2.18
NPAS2Q99743 AC021146.2-201ENST00000504736 556 ntBASIC1.42□□□□□ -2.18
NPAS2Q99743 TRMT112P2-201ENST00000512910 132 ntBASIC1.42□□□□□ -2.18
NPAS2Q99743 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.42□□□□□ -2.18
NPAS2Q99743 SCOCP1-201ENST00000554676 349 ntBASIC1.42□□□□□ -2.18
NPAS2Q99743 DNAJC19P9-201ENST00000555084 351 ntBASIC1.42□□□□□ -2.18
NPAS2Q99743 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.42□□□□□ -2.18
NPAS2Q99743 AC015720.1-201ENST00000565251 277 ntBASIC1.42□□□□□ -2.18
NPAS2Q99743 SNORD53B-201ENST00000577887 78 ntBASIC1.42□□□□□ -2.18
NPAS2Q99743 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.42□□□□□ -2.18
NPAS2Q99743 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.42□□□□□ -2.18
NPAS2Q99743 AC083806.3-201ENST00000614016 455 ntBASIC1.42□□□□□ -2.18
NPAS2Q99743 AC090517.2-201ENST00000614966 680 ntBASIC1.42□□□□□ -2.18
NPAS2Q99743 MIR3688-2-201ENST00000636963 87 ntBASIC1.42□□□□□ -2.18
NPAS2Q99743 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
NPAS2Q99743 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
NPAS2Q99743 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
NPAS2Q99743 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.41□□□□□ -2.18
NPAS2Q99743 MIR337-201ENST00000362281 93 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 Y_RNA.123-201ENST00000363338 102 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 Y_RNA.453-201ENST00000384223 109 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 RNU6-174P-201ENST00000410406 106 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 RN7SKP51-201ENST00000410781 304 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 RNU6-1148P-201ENST00000410992 104 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 AC099677.2-201ENST00000436385 175 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 MTCO3P18-201ENST00000440206 761 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 JTBP1-201ENST00000441314 247 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 RNU7-187P-201ENST00000458985 68 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 RNU1-98P-201ENST00000458992 160 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 AC096745.1-201ENST00000509945 370 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 AC026371.1-201ENST00000551867 419 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 SUB1P3-201ENST00000564581 315 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.41□□□□□ -2.18
NPAS2Q99743 SNORA77B-201ENST00000578179 125 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 AC068790.6-201ENST00000602558 258 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 AC146944.4-201ENST00000602697 718 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 MIR3976-201ENST00000606807 139 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 U4.5-201ENST00000617137 123 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 AC100810.6-201ENST00000638068 285 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 AC073869.6-201ENST00000640656 341 ntBASIC1.41□□□□□ -2.18
NPAS2Q99743 RNU1-62P-201ENST00000362599 164 ntBASIC1.4□□□□□ -2.19
NPAS2Q99743 SNORD113-7-201ENST00000363762 77 ntBASIC1.4□□□□□ -2.19
NPAS2Q99743 RNU6-877P-201ENST00000383868 107 ntBASIC1.4□□□□□ -2.19
NPAS2Q99743 MIR521-1-201ENST00000384902 87 ntBASIC1.4□□□□□ -2.19
NPAS2Q99743 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
NPAS2Q99743 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.4□□□□□ -2.19
NPAS2Q99743 SNRPEP10-201ENST00000420249 274 ntBASIC1.4□□□□□ -2.19
NPAS2Q99743 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.4□□□□□ -2.19
NPAS2Q99743 U8.21-201ENST00000459536 136 ntBASIC1.4□□□□□ -2.19
NPAS2Q99743 RPL36AP21-201ENST00000490372 323 ntBASIC1.4□□□□□ -2.19
NPAS2Q99743 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.4□□□□□ -2.19
NPAS2Q99743 RNA5SP445-201ENST00000515889 115 ntBASIC1.4□□□□□ -2.19
NPAS2Q99743 RNA5SP481-201ENST00000516814 122 ntBASIC1.4□□□□□ -2.19
NPAS2Q99743 RNU6-273P-201ENST00000516937 96 ntBASIC1.4□□□□□ -2.19
NPAS2Q99743 RNU6-856P-201ENST00000516959 98 ntBASIC1.4□□□□□ -2.19
NPAS2Q99743 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.4□□□□□ -2.19
NPAS2Q99743 MRPS36P4-201ENST00000534436 298 ntBASIC1.4□□□□□ -2.19
NPAS2Q99743 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.4□□□□□ -2.19
NPAS2Q99743 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.4□□□□□ -2.19
NPAS2Q99743 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.4□□□□□ -2.19
NPAS2Q99743 AC100830.2-201ENST00000581636 240 ntBASIC1.4□□□□□ -2.19
NPAS2Q99743 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.4□□□□□ -2.19
NPAS2Q99743 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.4□□□□□ -2.19
NPAS2Q99743 MIR7974-201ENST00000615835 79 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms