Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC078809.1-201ENST00000427601 140 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 CBX3P6-201ENST00000430257 527 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 USP9YP16-201ENST00000430287 407 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 RPEP5-201ENST00000441137 268 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 IFNA11P-201ENST00000446352 526 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 USP9YP23-201ENST00000455085 407 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 CYP2C59P-201ENST00000457790 269 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 AC087477.1-201ENST00000465747 340 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 SNRPGP7-201ENST00000469016 106 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 AF186996.7-201ENST00000492781 209 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 RNU6-397P-201ENST00000516226 104 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 RNY3P15-201ENST00000516297 97 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 RNU6-897P-201ENST00000517135 105 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 AP002770.2-201ENST00000543613 532 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.4□□□□□ -2.03
PKP4Q99569 AC121758.2-201ENST00000553271 193 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 AC007375.1-201ENST00000554513 578 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 AC125232.2-201ENST00000592457 143 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 SNORD14A-201ENST00000606526 91 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 AC137590.2-201ENST00000619709 240 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PKP4Q99569 AL136360.1-201ENST00000503377 1900 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
PKP4Q99569 RBBP8P1-201ENST00000449447 1844 ntBASIC2.4□□□□□ -2.03
PKP4Q99569 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PKP4Q99569 AC092268.1-201ENST00000342691 405 ntBASIC2.39□□□□□ -2.03
PKP4Q99569 RNU5B-2P-201ENST00000363036 113 ntBASIC2.39□□□□□ -2.03
PKP4Q99569 Y_RNA.183-201ENST00000363882 113 ntBASIC2.39□□□□□ -2.03
PKP4Q99569 SNORA25.6-201ENST00000364121 118 ntBASIC2.39□□□□□ -2.03
PKP4Q99569 RNU6-622P-201ENST00000384272 103 ntBASIC2.39□□□□□ -2.03
PKP4Q99569 RNY3P4-201ENST00000384428 101 ntBASIC2.39□□□□□ -2.03
PKP4Q99569 MIR95-201ENST00000385072 81 ntBASIC2.39□□□□□ -2.03
PKP4Q99569 MIR153-2-201ENST00000385225 87 ntBASIC2.39□□□□□ -2.03
PKP4Q99569 AC108059.2-201ENST00000434626 151 ntBASIC2.39□□□□□ -2.03
PKP4Q99569 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.39□□□□□ -2.03
PKP4Q99569 GPM6BP3-201ENST00000442797 145 ntBASIC2.39□□□□□ -2.03
PKP4Q99569 AC112771.1-201ENST00000463581 102 ntBASIC2.39□□□□□ -2.03
PKP4Q99569 HMGB3P3-201ENST00000510526 400 ntBASIC2.39□□□□□ -2.03
PKP4Q99569 RNU6-1271P-201ENST00000517049 105 ntBASIC2.39□□□□□ -2.03
PKP4Q99569 IGLV3-17-201ENST00000519099 244 ntBASIC2.39□□□□□ -2.03
PKP4Q99569 AC090897.2-201ENST00000581715 130 ntBASIC2.39□□□□□ -2.03
PKP4Q99569 MIR4672-201ENST00000583126 81 ntBASIC2.39□□□□□ -2.03
PKP4Q99569 AC062037.2-201ENST00000610137 73 ntBASIC2.39□□□□□ -2.03
PKP4Q99569 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.39□□□□□ -2.03
PKP4Q99569 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PKP4Q99569 AC130454.1-201ENST00000622948 401 ntBASIC2.39□□□□□ -2.03
PKP4Q99569 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PKP4Q99569 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.39□□□□□ -2.03
PKP4Q99569 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PKP4Q99569 AC069528.2-201ENST00000624849 1991 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.38□□□□□ -2.03
PKP4Q99569 Y_RNA.19-201ENST00000362462 99 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 RNU1-72P-201ENST00000362976 153 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 Y_RNA.222-201ENST00000364264 102 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 Y_RNA.288-201ENST00000364854 92 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 Y_RNA.396-201ENST00000383949 103 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 Y_RNA.458-201ENST00000384240 102 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 Y_RNA.461-201ENST00000384263 103 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 Y_RNA.476-201ENST00000384347 108 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 MIR1302-6-201ENST00000408466 90 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.38□□□□□ -2.03
PKP4Q99569 EIF4EP4-201ENST00000424916 578 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 SDAD1P3-201ENST00000427380 333 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 AC244670.1-201ENST00000436879 112 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 RPS12P2-201ENST00000439728 269 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 RPL39P29-201ENST00000447779 157 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PKP4Q99569 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.38□□□□□ -2.03
PKP4Q99569 PCNPP5-201ENST00000452246 481 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 U8.22-201ENST00000459141 133 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 AC067942.3-201ENST00000512025 362 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 Y_RNA.713-201ENST00000517013 96 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 AC021231.3-201ENST00000558497 370 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.38□□□□□ -2.03
PKP4Q99569 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.38□□□□□ -2.03
PKP4Q99569 MIR6895-201ENST00000613497 78 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 U6.92-201ENST00000636464 89 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 U6.104-201ENST00000637979 90 ntBASIC2.38□□□□□ -2.03
PKP4Q99569 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
PKP4Q99569 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PKP4Q99569 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
PKP4Q99569 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.37□□□□□ -2.03
PKP4Q99569 RNU6-222P-201ENST00000362438 107 ntBASIC2.37□□□□□ -2.03
PKP4Q99569 Y_RNA.64-201ENST00000362845 102 ntBASIC2.37□□□□□ -2.03
PKP4Q99569 RNU6-1285P-201ENST00000363480 105 ntBASIC2.37□□□□□ -2.03
PKP4Q99569 SNORA3A-201ENST00000364113 130 ntBASIC2.37□□□□□ -2.03
PKP4Q99569 RNU6-806P-201ENST00000365147 105 ntBASIC2.37□□□□□ -2.03
PKP4Q99569 SNORA6-201ENST00000384033 151 ntBASIC2.37□□□□□ -2.03
PKP4Q99569 RNU6-472P-201ENST00000384299 107 ntBASIC2.37□□□□□ -2.03
PKP4Q99569 AL359511.1-201ENST00000402970 211 ntBASIC2.37□□□□□ -2.03
PKP4Q99569 RNU6-130P-201ENST00000411112 103 ntBASIC2.37□□□□□ -2.03
PKP4Q99569 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.37□□□□□ -2.03
PKP4Q99569 RPL30P12-201ENST00000474666 353 ntBASIC2.37□□□□□ -2.03
PKP4Q99569 AC010469.2-201ENST00000496412 480 ntBASIC2.37□□□□□ -2.03
PKP4Q99569 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.37□□□□□ -2.03
PKP4Q99569 RPL23AP94-201ENST00000512518 302 ntBASIC2.37□□□□□ -2.03
PKP4Q99569 RNU6-408P-201ENST00000515910 100 ntBASIC2.37□□□□□ -2.03
PKP4Q99569 AC022868.1-201ENST00000517767 391 ntBASIC2.37□□□□□ -2.03
PKP4Q99569 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 216.9 ms