Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.28□□□□□ -2.36
TPM4P67936 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.28□□□□□ -2.36
TPM4P67936 RPS29P1-201ENST00000465274 159 ntBASIC0.28□□□□□ -2.36
TPM4P67936 RNU6-467P-201ENST00000517027 110 ntBASIC0.28□□□□□ -2.36
TPM4P67936 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.28□□□□□ -2.36
TPM4P67936 AC004832.4-201ENST00000608952 331 ntBASIC0.28□□□□□ -2.36
TPM4P67936 RNU5F-6P-201ENST00000362979 116 ntBASIC0.27□□□□□ -2.37
TPM4P67936 RNU6-1240P-201ENST00000365155 104 ntBASIC0.27□□□□□ -2.37
TPM4P67936 RNU6-83P-201ENST00000384568 112 ntBASIC0.27□□□□□ -2.37
TPM4P67936 AL354692.1-201ENST00000423044 315 ntBASIC0.27□□□□□ -2.37
TPM4P67936 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.27□□□□□ -2.37
TPM4P67936 AL445305.1-201ENST00000432577 575 ntBASIC0.27□□□□□ -2.37
TPM4P67936 MTCO2P7-201ENST00000446518 666 ntBASIC0.27□□□□□ -2.37
TPM4P67936 AC022493.2-201ENST00000506122 481 ntBASIC0.27□□□□□ -2.37
TPM4P67936 AC079140.5-201ENST00000507882 310 ntBASIC0.27□□□□□ -2.37
TPM4P67936 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.27□□□□□ -2.37
TPM4P67936 Y_RNA.672-201ENST00000516289 104 ntBASIC0.27□□□□□ -2.37
TPM4P67936 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.27□□□□□ -2.37
TPM4P67936 MIR5093-201ENST00000583199 100 ntBASIC0.27□□□□□ -2.37
TPM4P67936 AC009878.1-201ENST00000621819 340 ntBASIC0.27□□□□□ -2.37
TPM4P67936 AC243829.3-201ENST00000622177 108 ntBASIC0.27□□□□□ -2.37
TPM4P67936 snoZ196.1-201ENST00000625269 89 ntBASIC0.27□□□□□ -2.37
TPM4P67936 RNU6-169P-201ENST00000365336 107 ntBASIC0.26□□□□□ -2.37
TPM4P67936 RPS26P42-201ENST00000413485 326 ntBASIC0.26□□□□□ -2.37
TPM4P67936 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.26□□□□□ -2.37
TPM4P67936 LINC01399-202ENST00000458450 244 ntBASIC0.26□□□□□ -2.37
TPM4P67936 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.26□□□□□ -2.37
TPM4P67936 SNORA68.3-201ENST00000515906 83 ntBASIC0.26□□□□□ -2.37
TPM4P67936 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.26□□□□□ -2.37
TPM4P67936 AL096861.1-201ENST00000610899 123 ntBASIC0.26□□□□□ -2.37
TPM4P67936 7SK.10-201ENST00000621414 298 ntBASIC0.26□□□□□ -2.37
TPM4P67936 AC068787.1-201ENST00000623908 691 ntBASIC0.26□□□□□ -2.37
TPM4P67936 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.26□□□□□ -2.37
TPM4P67936 RPS3AP3-201ENST00000411933 242 ntBASIC0.25□□□□□ -2.37
TPM4P67936 AC244098.3-201ENST00000424803 96 ntBASIC0.25□□□□□ -2.37
TPM4P67936 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.25□□□□□ -2.37
TPM4P67936 DAP3P1-201ENST00000441522 278 ntBASIC0.25□□□□□ -2.37
TPM4P67936 MTCO3P8-201ENST00000453691 755 ntBASIC0.25□□□□□ -2.37
TPM4P67936 snoU13.25-201ENST00000458945 104 ntBASIC0.25□□□□□ -2.37
TPM4P67936 RNU6-221P-201ENST00000459541 99 ntBASIC0.25□□□□□ -2.37
TPM4P67936 AC002044.1-201ENST00000606707 158 ntBASIC0.25□□□□□ -2.37
TPM4P67936 SNORA28-201ENST00000606769 126 ntBASIC0.25□□□□□ -2.37
TPM4P67936 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.25□□□□□ -2.37
TPM4P67936 RNU6-501P-201ENST00000364072 100 ntBASIC0.24□□□□□ -2.37
TPM4P67936 SNORD114-22-201ENST00000365423 72 ntBASIC0.24□□□□□ -2.37
TPM4P67936 Y_RNA.367-201ENST00000365544 101 ntBASIC0.24□□□□□ -2.37
TPM4P67936 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
TPM4P67936 RNU6-348P-201ENST00000384386 107 ntBASIC0.24□□□□□ -2.37
TPM4P67936 RNU6-393P-201ENST00000384475 107 ntBASIC0.24□□□□□ -2.37
TPM4P67936 RNU6-1186P-201ENST00000410429 97 ntBASIC0.24□□□□□ -2.37
TPM4P67936 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.24□□□□□ -2.37
TPM4P67936 RPL23AP50-201ENST00000434149 455 ntBASIC0.24□□□□□ -2.37
TPM4P67936 AC084290.1-201ENST00000434995 374 ntBASIC0.24□□□□□ -2.37
TPM4P67936 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.24□□□□□ -2.37
TPM4P67936 STAG3L5P-204ENST00000443759 179 ntBASIC0.24□□□□□ -2.37
TPM4P67936 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.24□□□□□ -2.37
TPM4P67936 RNU2-69P-201ENST00000516061 100 ntBASIC0.24□□□□□ -2.37
TPM4P67936 RNU6-1110P-201ENST00000516462 101 ntBASIC0.24□□□□□ -2.37
TPM4P67936 PCMTD1P2-201ENST00000565017 355 ntBASIC0.24□□□□□ -2.37
TPM4P67936 MIR5000-201ENST00000577717 103 ntBASIC0.24□□□□□ -2.37
TPM4P67936 AC131055.1-201ENST00000584626 316 ntBASIC0.24□□□□□ -2.37
TPM4P67936 AC005771.1-201ENST00000585581 349 ntBASIC0.24□□□□□ -2.37
TPM4P67936 AP000907.4-201ENST00000604143 237 ntBASIC0.24□□□□□ -2.37
TPM4P67936 AC099654.13-201ENST00000639774 207 ntBASIC0.24□□□□□ -2.37
TPM4P67936 MTND5P16-201ENST00000460269 1703 ntBASIC0.24□□□□□ -2.37
TPM4P67936 AC090625.1-201ENST00000357130 210 ntBASIC0.23□□□□□ -2.37
TPM4P67936 MIRLET7D-201ENST00000362263 87 ntBASIC0.23□□□□□ -2.37
TPM4P67936 RNU6-1200P-201ENST00000384162 107 ntBASIC0.23□□□□□ -2.37
TPM4P67936 SNORA67.2-201ENST00000384300 149 ntBASIC0.23□□□□□ -2.37
TPM4P67936 RNU6-424P-201ENST00000384367 105 ntBASIC0.23□□□□□ -2.37
TPM4P67936 RNU6-1067P-201ENST00000384752 107 ntBASIC0.23□□□□□ -2.37
TPM4P67936 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.23□□□□□ -2.37
TPM4P67936 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.23□□□□□ -2.37
TPM4P67936 AL596276.1-201ENST00000434465 418 ntBASIC0.23□□□□□ -2.37
TPM4P67936 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.23□□□□□ -2.37
TPM4P67936 RNU7-94P-201ENST00000459576 63 ntBASIC0.23□□□□□ -2.37
TPM4P67936 AC022868.1-201ENST00000517767 391 ntBASIC0.23□□□□□ -2.37
TPM4P67936 AC090572.1-201ENST00000519251 160 ntBASIC0.23□□□□□ -2.37
TPM4P67936 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.23□□□□□ -2.37
TPM4P67936 AC004223.2-201ENST00000590309 544 ntBASIC0.23□□□□□ -2.37
TPM4P67936 RSL24D1P11-201ENST00000591045 491 ntBASIC0.23□□□□□ -2.37
TPM4P67936 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.23□□□□□ -2.37
TPM4P67936 AP000811.1-201ENST00000603803 651 ntBASIC0.23□□□□□ -2.37
TPM4P67936 AC018714.1-201ENST00000605028 208 ntBASIC0.23□□□□□ -2.37
TPM4P67936 AC068792.1-201ENST00000621354 417 ntBASIC0.23□□□□□ -2.37
TPM4P67936 AL049777.1-201ENST00000622740 518 ntBASIC0.23□□□□□ -2.37
TPM4P67936 AL078596.1-201ENST00000624856 447 ntBASIC0.23□□□□□ -2.37
TPM4P67936 AC008873.1-201ENST00000625051 138 ntBASIC0.23□□□□□ -2.37
TPM4P67936 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
TPM4P67936 VTRNA1-3-201ENST00000365645 89 ntBASIC0.22□□□□□ -2.37
TPM4P67936 RNU6-434P-201ENST00000384376 107 ntBASIC0.22□□□□□ -2.37
TPM4P67936 RNU4-46P-201ENST00000410818 138 ntBASIC0.22□□□□□ -2.37
TPM4P67936 AL365184.2-201ENST00000431139 435 ntBASIC0.22□□□□□ -2.37
TPM4P67936 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.22□□□□□ -2.37
TPM4P67936 AC010493.1-201ENST00000513479 292 ntBASIC0.22□□□□□ -2.37
TPM4P67936 RNU7-99P-201ENST00000516271 62 ntBASIC0.22□□□□□ -2.37
TPM4P67936 MTND4LP26-201ENST00000518144 282 ntBASIC0.22□□□□□ -2.37
TPM4P67936 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.22□□□□□ -2.37
TPM4P67936 MIR6788-201ENST00000618842 66 ntBASIC0.22□□□□□ -2.37
TPM4P67936 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms