Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 RNU6-1135P-201ENST00000411083 103 ntBASIC3.2□□□□□ -1.9
NPHS1O60500 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.2□□□□□ -1.9
NPHS1O60500 YME1L1P1-201ENST00000429435 297 ntBASIC3.2□□□□□ -1.9
NPHS1O60500 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.2□□□□□ -1.9
NPHS1O60500 AC025518.1-201ENST00000479856 347 ntBASIC3.2□□□□□ -1.9
NPHS1O60500 AC104619.4-201ENST00000510773 249 ntBASIC3.2□□□□□ -1.9
NPHS1O60500 AC093331.1-201ENST00000521474 169 ntBASIC3.2□□□□□ -1.9
NPHS1O60500 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.2□□□□□ -1.9
NPHS1O60500 UCA1.1-201ENST00000620952 75 ntBASIC3.2□□□□□ -1.9
NPHS1O60500 AC110079.1-202ENST00000635213 138 ntBASIC3.2□□□□□ -1.9
NPHS1O60500 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.2□□□□□ -1.9
NPHS1O60500 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.2□□□□□ -1.9
NPHS1O60500 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NPHS1O60500 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPHS1O60500 AC093010.3-201ENST00000570269 15214 ntBASIC3.2□□□□□ -1.9
NPHS1O60500 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
NPHS1O60500 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NPHS1O60500 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
NPHS1O60500 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.19□□□□□ -1.9
NPHS1O60500 AC068700.1-201ENST00000565862 3754 ntBASIC3.19□□□□□ -1.9
NPHS1O60500 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.19□□□□□ -1.9
NPHS1O60500 RNA5SP139-201ENST00000364340 117 ntBASIC3.19□□□□□ -1.9
NPHS1O60500 RPL21P3-201ENST00000395517 478 ntBASIC3.19□□□□□ -1.9
NPHS1O60500 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.19□□□□□ -1.9
NPHS1O60500 AC146507.2-201ENST00000460608 476 ntBASIC3.19□□□□□ -1.9
NPHS1O60500 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
NPHS1O60500 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.19□□□□□ -1.9
NPHS1O60500 MIR449C-201ENST00000516047 92 ntBASIC3.19□□□□□ -1.9
NPHS1O60500 RNU7-200P-201ENST00000516105 62 ntBASIC3.19□□□□□ -1.9
NPHS1O60500 RNU1-95P-201ENST00000516357 160 ntBASIC3.19□□□□□ -1.9
NPHS1O60500 RNU1-128P-201ENST00000516704 160 ntBASIC3.19□□□□□ -1.9
NPHS1O60500 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.19□□□□□ -1.9
NPHS1O60500 AC136628.3-201ENST00000521868 290 ntBASIC3.19□□□□□ -1.9
NPHS1O60500 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.19□□□□□ -1.9
NPHS1O60500 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.19□□□□□ -1.9
NPHS1O60500 AC106785.1-201ENST00000565935 262 ntBASIC3.19□□□□□ -1.9
NPHS1O60500 AC099778.2-201ENST00000610904 211 ntBASIC3.19□□□□□ -1.9
NPHS1O60500 U6.115-201ENST00000636045 103 ntBASIC3.19□□□□□ -1.9
NPHS1O60500 AC009093.8-201ENST00000641769 292 ntBASIC3.19□□□□□ -1.9
NPHS1O60500 MAPK10-322ENST00000641485 4530 ntBASIC3.19□□□□□ -1.9
NPHS1O60500 AC134026.1-201ENST00000623249 2239 ntBASIC3.19□□□□□ -1.9
NPHS1O60500 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.19□□□□□ -1.9
NPHS1O60500 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NPHS1O60500 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NPHS1O60500 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.18□□□□□ -1.9
NPHS1O60500 RNU6-1048P-201ENST00000364054 107 ntBASIC3.18□□□□□ -1.9
NPHS1O60500 AL359837.1-201ENST00000381357 287 ntBASIC3.18□□□□□ -1.9
NPHS1O60500 RNY1P5-201ENST00000383890 115 ntBASIC3.18□□□□□ -1.9
NPHS1O60500 MTCO2P33-201ENST00000402100 465 ntBASIC3.18□□□□□ -1.9
NPHS1O60500 RNU5E-9P-201ENST00000411164 104 ntBASIC3.18□□□□□ -1.9
NPHS1O60500 CYCSP19-201ENST00000411715 316 ntBASIC3.18□□□□□ -1.9
NPHS1O60500 Z75741.1-201ENST00000446793 314 ntBASIC3.18□□□□□ -1.9
NPHS1O60500 AC106707.2-201ENST00000484182 374 ntBASIC3.18□□□□□ -1.9
NPHS1O60500 AC006483.1-201ENST00000487308 313 ntBASIC3.18□□□□□ -1.9
NPHS1O60500 AC093663.1-201ENST00000497190 394 ntBASIC3.18□□□□□ -1.9
NPHS1O60500 RNU5F-4P-201ENST00000516581 114 ntBASIC3.18□□□□□ -1.9
NPHS1O60500 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.18□□□□□ -1.9
NPHS1O60500 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.18□□□□□ -1.9
NPHS1O60500 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
NPHS1O60500 AC091564.4-201ENST00000533934 2194 ntBASIC3.18□□□□□ -1.9
NPHS1O60500 AC010329.5-201ENST00000623497 2174 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 Y_RNA.7-201ENST00000362352 102 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 Y_RNA.238-201ENST00000364441 102 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 RNU6-1083P-201ENST00000384022 107 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 Y_RNA.441-201ENST00000384123 112 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 MIR29B2-201ENST00000385055 81 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 SNORA40.19-201ENST00000390846 128 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 RNU6ATAC-201ENST00000408749 126 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 RNU2-2P-201ENST00000410396 191 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 RN7SKP202-201ENST00000410439 330 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 RNA5SP112-201ENST00000515937 99 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 RNA5SP380-201ENST00000517190 98 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 AC100767.1-201ENST00000528178 123 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.17□□□□□ -1.9
NPHS1O60500 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.17□□□□□ -1.9
NPHS1O60500 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.17□□□□□ -1.9
NPHS1O60500 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.17□□□□□ -1.9
NPHS1O60500 RPL17P51-201ENST00000605218 238 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 RNU2-4P-201ENST00000606190 192 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 U2.15-201ENST00000611544 191 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 U2.16-201ENST00000613119 191 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 U2.12-201ENST00000613778 191 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 AL121772.2-201ENST00000614331 297 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 U2.9-201ENST00000615427 191 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 AL078604.3-201ENST00000615580 211 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 U2.11-201ENST00000616345 191 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 U2.2-201ENST00000616535 191 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 U2.3-201ENST00000617785 191 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 U2.19-201ENST00000618602 191 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 RNU2-1-201ENST00000618664 191 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 U2.6-201ENST00000619225 191 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 U2.5-201ENST00000619465 191 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 U2.10-201ENST00000620268 191 ntBASIC3.17□□□□□ -1.9
NPHS1O60500 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.16□□□□□ -1.9
NPHS1O60500 SNORA51.4-201ENST00000364993 124 ntBASIC3.16□□□□□ -1.9
NPHS1O60500 RNU4-17P-201ENST00000365598 141 ntBASIC3.16□□□□□ -1.9
NPHS1O60500 SNORA5A-201ENST00000384111 134 ntBASIC3.16□□□□□ -1.9
NPHS1O60500 SNORA46-201ENST00000384762 135 ntBASIC3.16□□□□□ -1.9
NPHS1O60500 MIR586-201ENST00000385035 97 ntBASIC3.16□□□□□ -1.9
NPHS1O60500 RNU6-855P-201ENST00000410395 104 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 202.4 ms