Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
KLF4O43474 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
KLF4O43474 Y_RNA.60-201ENST00000362831 98 ntBASIC3.16□□□□□ -1.9
KLF4O43474 Y_RNA.243-201ENST00000364481 109 ntBASIC3.16□□□□□ -1.9
KLF4O43474 AL603910.2-201ENST00000407268 136 ntBASIC3.16□□□□□ -1.9
KLF4O43474 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.16□□□□□ -1.9
KLF4O43474 SNORA70.18-201ENST00000516696 98 ntBASIC3.16□□□□□ -1.9
KLF4O43474 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.16□□□□□ -1.9
KLF4O43474 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.16□□□□□ -1.9
KLF4O43474 AC013412.1-201ENST00000610687 192 ntBASIC3.16□□□□□ -1.9
KLF4O43474 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.16□□□□□ -1.9
KLF4O43474 AC073346.2-201ENST00000624724 2058 ntBASIC3.16□□□□□ -1.9
KLF4O43474 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KLF4O43474 AL356274.2-201ENST00000624379 3752 ntBASIC3.16□□□□□ -1.9
KLF4O43474 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
KLF4O43474 SNORA9-201ENST00000384215 133 ntBASIC3.15□□□□□ -1.91
KLF4O43474 RNVU1-14-201ENST00000384770 164 ntBASIC3.15□□□□□ -1.91
KLF4O43474 MIR490-201ENST00000384865 128 ntBASIC3.15□□□□□ -1.91
KLF4O43474 AL139095.1-201ENST00000404326 391 ntBASIC3.15□□□□□ -1.91
KLF4O43474 RNU6-1199P-201ENST00000411249 104 ntBASIC3.15□□□□□ -1.91
KLF4O43474 MRPS10P1-201ENST00000448483 130 ntBASIC3.15□□□□□ -1.91
KLF4O43474 AC245102.2-201ENST00000448956 180 ntBASIC3.15□□□□□ -1.91
KLF4O43474 CENPBD1P1-201ENST00000464061 469 ntBASIC3.15□□□□□ -1.91
KLF4O43474 SNORA31.26-201ENST00000517250 137 ntBASIC3.15□□□□□ -1.91
KLF4O43474 AC141273.2-201ENST00000618989 130 ntBASIC3.15□□□□□ -1.91
KLF4O43474 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.15□□□□□ -1.91
KLF4O43474 U6.115-201ENST00000636045 103 ntBASIC3.15□□□□□ -1.91
KLF4O43474 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
KLF4O43474 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.15□□□□□ -1.91
KLF4O43474 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
KLF4O43474 PWAR6-201ENST00000552334 4618 ntBASIC3.15□□□□□ -1.91
KLF4O43474 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KLF4O43474 RNA5SP50-201ENST00000363731 107 ntBASIC3.14□□□□□ -1.91
KLF4O43474 Y_RNA.257-201ENST00000364596 102 ntBASIC3.14□□□□□ -1.91
KLF4O43474 Y_RNA.329-201ENST00000365209 107 ntBASIC3.14□□□□□ -1.91
KLF4O43474 Y_RNA.332-201ENST00000365271 113 ntBASIC3.14□□□□□ -1.91
KLF4O43474 RNU6-418P-201ENST00000384035 107 ntBASIC3.14□□□□□ -1.91
KLF4O43474 SNORD14D-201ENST00000384390 87 ntBASIC3.14□□□□□ -1.91
KLF4O43474 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.14□□□□□ -1.91
KLF4O43474 AL357134.1-201ENST00000445848 426 ntBASIC3.14□□□□□ -1.91
KLF4O43474 AC016717.1-201ENST00000448918 286 ntBASIC3.14□□□□□ -1.91
KLF4O43474 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.14□□□□□ -1.91
KLF4O43474 RNU6-436P-201ENST00000516171 114 ntBASIC3.14□□□□□ -1.91
KLF4O43474 SNORA27.4-201ENST00000516650 95 ntBASIC3.14□□□□□ -1.91
KLF4O43474 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.14□□□□□ -1.91
KLF4O43474 AC026271.5-201ENST00000577873 130 ntBASIC3.14□□□□□ -1.91
KLF4O43474 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KLF4O43474 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
KLF4O43474 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.14□□□□□ -1.91
KLF4O43474 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
KLF4O43474 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KLF4O43474 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KLF4O43474 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KLF4O43474 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.13□□□□□ -1.91
KLF4O43474 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.13□□□□□ -1.91
KLF4O43474 RNU6-271P-201ENST00000363858 105 ntBASIC3.13□□□□□ -1.91
KLF4O43474 AL031003.1-201ENST00000404229 172 ntBASIC3.13□□□□□ -1.91
KLF4O43474 EDDM3CP-201ENST00000415977 425 ntBASIC3.13□□□□□ -1.91
KLF4O43474 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.13□□□□□ -1.91
KLF4O43474 MTCO1P5-201ENST00000433573 344 ntBASIC3.13□□□□□ -1.91
KLF4O43474 RN7SL442P-201ENST00000473804 320 ntBASIC3.13□□□□□ -1.91
KLF4O43474 AC091959.1-201ENST00000495857 238 ntBASIC3.13□□□□□ -1.91
KLF4O43474 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.13□□□□□ -1.91
KLF4O43474 AC093331.1-201ENST00000521474 169 ntBASIC3.13□□□□□ -1.91
KLF4O43474 NDUFA5P6-201ENST00000542110 379 ntBASIC3.13□□□□□ -1.91
KLF4O43474 U4.6-201ENST00000621618 127 ntBASIC3.13□□□□□ -1.91
KLF4O43474 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
KLF4O43474 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KLF4O43474 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
KLF4O43474 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KLF4O43474 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.12□□□□□ -1.91
KLF4O43474 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
KLF4O43474 SNORD114-7-201ENST00000362520 77 ntBASIC3.12□□□□□ -1.91
KLF4O43474 SNORD115-30-201ENST00000364117 82 ntBASIC3.12□□□□□ -1.91
KLF4O43474 Y_RNA.277-201ENST00000364754 102 ntBASIC3.12□□□□□ -1.91
KLF4O43474 RNA5SP267-201ENST00000364893 126 ntBASIC3.12□□□□□ -1.91
KLF4O43474 Y_RNA.418-201ENST00000384029 102 ntBASIC3.12□□□□□ -1.91
KLF4O43474 MIR592-201ENST00000384959 97 ntBASIC3.12□□□□□ -1.91
KLF4O43474 RNU2-48P-201ENST00000410694 191 ntBASIC3.12□□□□□ -1.91
KLF4O43474 AC010154.1-201ENST00000425857 269 ntBASIC3.12□□□□□ -1.91
KLF4O43474 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.12□□□□□ -1.91
KLF4O43474 AC018868.1-201ENST00000491307 315 ntBASIC3.12□□□□□ -1.91
KLF4O43474 AC010598.1-201ENST00000510378 103 ntBASIC3.12□□□□□ -1.91
KLF4O43474 RNU4-71P-201ENST00000516258 113 ntBASIC3.12□□□□□ -1.91
KLF4O43474 Y_RNA.680-201ENST00000516441 93 ntBASIC3.12□□□□□ -1.91
KLF4O43474 RPPH1-2P-201ENST00000516688 293 ntBASIC3.12□□□□□ -1.91
KLF4O43474 AC107934.2-201ENST00000518653 310 ntBASIC3.12□□□□□ -1.91
KLF4O43474 AC104027.1-201ENST00000521887 300 ntBASIC3.12□□□□□ -1.91
KLF4O43474 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.12□□□□□ -1.91
KLF4O43474 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.12□□□□□ -1.91
KLF4O43474 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.12□□□□□ -1.91
KLF4O43474 PRELID2P1-201ENST00000552837 301 ntBASIC3.12□□□□□ -1.91
KLF4O43474 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.12□□□□□ -1.91
KLF4O43474 AL162424.1-201ENST00000602325 221 ntBASIC3.12□□□□□ -1.91
KLF4O43474 DEFB117-201ENST00000602356 141 ntBASIC3.12□□□□□ -1.91
KLF4O43474 MIR7851-201ENST00000610611 160 ntBASIC3.12□□□□□ -1.91
KLF4O43474 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.12□□□□□ -1.91
KLF4O43474 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
KLF4O43474 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
KLF4O43474 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 195 ms