Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC145146.1-201ENST00000496370 254 ntBASIC3.3□□□□□ -1.88
PPARGC1AQ9UBK2 RNA5SP217-201ENST00000515959 91 ntBASIC3.3□□□□□ -1.88
PPARGC1AQ9UBK2 RN7SKP40-201ENST00000517211 242 ntBASIC3.3□□□□□ -1.88
PPARGC1AQ9UBK2 SCARNA20.6-201ENST00000517251 106 ntBASIC3.3□□□□□ -1.88
PPARGC1AQ9UBK2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.3□□□□□ -1.88
PPARGC1AQ9UBK2 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.3□□□□□ -1.88
PPARGC1AQ9UBK2 MIR4643-201ENST00000577473 78 ntBASIC3.3□□□□□ -1.88
PPARGC1AQ9UBK2 MIR5004-201ENST00000579078 107 ntBASIC3.3□□□□□ -1.88
PPARGC1AQ9UBK2 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.3□□□□□ -1.88
PPARGC1AQ9UBK2 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.3□□□□□ -1.88
PPARGC1AQ9UBK2 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
PPARGC1AQ9UBK2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PPARGC1AQ9UBK2 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
PPARGC1AQ9UBK2 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 Y_RNA.82-201ENST00000363000 102 ntBASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 Y_RNA.92-201ENST00000363043 102 ntBASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 Y_RNA.235-201ENST00000364412 102 ntBASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 Y_RNA.274-201ENST00000364714 101 ntBASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 Y_RNA.306-201ENST00000365015 102 ntBASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 Y_RNA.312-201ENST00000365089 102 ntBASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 Y_RNA.322-201ENST00000365151 102 ntBASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 Y_RNA.383-201ENST00000383855 97 ntBASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 RPL32P35-201ENST00000415214 394 ntBASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 AL513477.1-202ENST00000417061 214 ntBASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 PIGPP3-201ENST00000425307 415 ntBASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 AC009237.7-201ENST00000447357 229 ntBASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 Y_RNA.650-201ENST00000459002 102 ntBASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 SNORA27.4-201ENST00000516650 95 ntBASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 Y_RNA.777-201ENST00000516982 102 ntBASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 SNORA31.26-201ENST00000517250 137 ntBASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 MIR4282-201ENST00000583613 67 ntBASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 Y_RNA.771-201ENST00000598668 102 ntBASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 AC096577.2-201ENST00000611455 153 ntBASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 uc_338.25-201ENST00000613756 156 ntBASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 FTX_2.1-201ENST00000618816 94 ntBASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 Y_RNA.789-201ENST00000622480 102 ntBASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 AC138915.1-201ENST00000565427 1685 ntBASIC3.29□□□□□ -1.88
PPARGC1AQ9UBK2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PPARGC1AQ9UBK2 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
PPARGC1AQ9UBK2 MIR208A-201ENST00000362287 71 ntBASIC3.28□□□□□ -1.88
PPARGC1AQ9UBK2 Y_RNA.83-201ENST00000363005 113 ntBASIC3.28□□□□□ -1.88
PPARGC1AQ9UBK2 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.28□□□□□ -1.88
PPARGC1AQ9UBK2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.28□□□□□ -1.88
PPARGC1AQ9UBK2 EIF4EP4-201ENST00000424916 578 ntBASIC3.28□□□□□ -1.88
PPARGC1AQ9UBK2 Z96811.1-201ENST00000445880 108 ntBASIC3.28□□□□□ -1.88
PPARGC1AQ9UBK2 AC115115.1-201ENST00000449927 248 ntBASIC3.28□□□□□ -1.88
PPARGC1AQ9UBK2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.28□□□□□ -1.88
PPARGC1AQ9UBK2 NDUFB4P10-201ENST00000452541 359 ntBASIC3.28□□□□□ -1.88
PPARGC1AQ9UBK2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.28□□□□□ -1.88
PPARGC1AQ9UBK2 AC091959.1-201ENST00000495857 238 ntBASIC3.28□□□□□ -1.88
PPARGC1AQ9UBK2 RNA5SP112-201ENST00000515937 99 ntBASIC3.28□□□□□ -1.88
PPARGC1AQ9UBK2 SCARNA11.3-201ENST00000517276 130 ntBASIC3.28□□□□□ -1.88
PPARGC1AQ9UBK2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.28□□□□□ -1.88
PPARGC1AQ9UBK2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.28□□□□□ -1.88
PPARGC1AQ9UBK2 AC010620.2-201ENST00000600135 313 ntBASIC3.28□□□□□ -1.88
PPARGC1AQ9UBK2 AC068205.3-201ENST00000636385 468 ntBASIC3.28□□□□□ -1.88
PPARGC1AQ9UBK2 MIR3674-201ENST00000636576 68 ntBASIC3.28□□□□□ -1.88
PPARGC1AQ9UBK2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.28□□□□□ -1.88
PPARGC1AQ9UBK2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PPARGC1AQ9UBK2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.89
PPARGC1AQ9UBK2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.27□□□□□ -1.89
PPARGC1AQ9UBK2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PPARGC1AQ9UBK2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.27□□□□□ -1.89
PPARGC1AQ9UBK2 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.27□□□□□ -1.89
PPARGC1AQ9UBK2 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PPARGC1AQ9UBK2 SNORA38.1-201ENST00000364172 131 ntBASIC3.27□□□□□ -1.89
PPARGC1AQ9UBK2 Y_RNA.418-201ENST00000384029 102 ntBASIC3.27□□□□□ -1.89
PPARGC1AQ9UBK2 SNORA7.4-201ENST00000384249 137 ntBASIC3.27□□□□□ -1.89
PPARGC1AQ9UBK2 MIR29B2-201ENST00000385055 81 ntBASIC3.27□□□□□ -1.89
PPARGC1AQ9UBK2 RPL21P3-201ENST00000395517 478 ntBASIC3.27□□□□□ -1.89
PPARGC1AQ9UBK2 AC104332.2-201ENST00000429959 156 ntBASIC3.27□□□□□ -1.89
PPARGC1AQ9UBK2 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.27□□□□□ -1.89
PPARGC1AQ9UBK2 BX510359.1-201ENST00000456973 237 ntBASIC3.27□□□□□ -1.89
PPARGC1AQ9UBK2 PRELID3BP1-201ENST00000457142 540 ntBASIC3.27□□□□□ -1.89
PPARGC1AQ9UBK2 AC146507.2-201ENST00000460608 476 ntBASIC3.27□□□□□ -1.89
PPARGC1AQ9UBK2 RN7SL863P-201ENST00000462370 296 ntBASIC3.27□□□□□ -1.89
PPARGC1AQ9UBK2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.27□□□□□ -1.89
PPARGC1AQ9UBK2 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.27□□□□□ -1.89
PPARGC1AQ9UBK2 Z83818.1-201ENST00000603584 150 ntBASIC3.27□□□□□ -1.89
PPARGC1AQ9UBK2 AC018692.3-201ENST00000623929 123 ntBASIC3.27□□□□□ -1.89
PPARGC1AQ9UBK2 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PPARGC1AQ9UBK2 AC073346.2-201ENST00000624724 2058 ntBASIC3.27□□□□□ -1.89
PPARGC1AQ9UBK2 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PPARGC1AQ9UBK2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PPARGC1AQ9UBK2 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PPARGC1AQ9UBK2 MIR411-201ENST00000362239 96 ntBASIC3.26□□□□□ -1.89
PPARGC1AQ9UBK2 Y_RNA.122-201ENST00000363331 96 ntBASIC3.26□□□□□ -1.89
PPARGC1AQ9UBK2 Y_RNA.199-201ENST00000364014 102 ntBASIC3.26□□□□□ -1.89
PPARGC1AQ9UBK2 RNU6-740P-201ENST00000364734 105 ntBASIC3.26□□□□□ -1.89
PPARGC1AQ9UBK2 RNU6-1062P-201ENST00000383908 107 ntBASIC3.26□□□□□ -1.89
PPARGC1AQ9UBK2 MIR23A-201ENST00000385245 73 ntBASIC3.26□□□□□ -1.89
PPARGC1AQ9UBK2 RNU6-1248P-201ENST00000391096 64 ntBASIC3.26□□□□□ -1.89
PPARGC1AQ9UBK2 RNU2-54P-201ENST00000410299 190 ntBASIC3.26□□□□□ -1.89
PPARGC1AQ9UBK2 RNA5SP475-201ENST00000410568 110 ntBASIC3.26□□□□□ -1.89
PPARGC1AQ9UBK2 RPL19P1-201ENST00000411635 428 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 225.4 ms