Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 Y_RNA.424-201ENST00000384063 103 ntBASIC2.82□□□□□ -1.96
TRIM43Q96BQ3 RNU2-63P-201ENST00000410792 194 ntBASIC2.82□□□□□ -1.96
TRIM43Q96BQ3 DPH3P2-201ENST00000422618 250 ntBASIC2.82□□□□□ -1.96
TRIM43Q96BQ3 AL118496.2-201ENST00000448300 230 ntBASIC2.82□□□□□ -1.96
TRIM43Q96BQ3 AC090515.1-201ENST00000465295 476 ntBASIC2.82□□□□□ -1.96
TRIM43Q96BQ3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.82□□□□□ -1.96
TRIM43Q96BQ3 RN7SKP43-201ENST00000516173 320 ntBASIC2.82□□□□□ -1.96
TRIM43Q96BQ3 RNU6-911P-201ENST00000516523 104 ntBASIC2.82□□□□□ -1.96
TRIM43Q96BQ3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.82□□□□□ -1.96
TRIM43Q96BQ3 RN7SKP40-201ENST00000517211 242 ntBASIC2.82□□□□□ -1.96
TRIM43Q96BQ3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.82□□□□□ -1.96
TRIM43Q96BQ3 AL356575.1-201ENST00000603008 283 ntBASIC2.82□□□□□ -1.96
TRIM43Q96BQ3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.82□□□□□ -1.96
TRIM43Q96BQ3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
TRIM43Q96BQ3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
TRIM43Q96BQ3 ZNF72P-201ENST00000425869 1908 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 RNU6-280P-201ENST00000364145 104 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 RNA5SP240-201ENST00000365355 128 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 RNU1-109P-201ENST00000383960 147 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 RNU6-1274P-201ENST00000384557 107 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 Y_RNA.526-201ENST00000384572 110 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 Y_RNA.557-201ENST00000384680 107 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 MIR181A2-201ENST00000384863 110 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 RNU6-220P-201ENST00000390919 107 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 RNU6-159P-201ENST00000391080 106 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 RNU1-139P-201ENST00000391307 165 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 Y_RNA.597-201ENST00000410463 100 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 RPL19P1-201ENST00000411635 428 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 AC092427.1-202ENST00000430569 476 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 CHEK2P4-201ENST00000450340 246 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 UQCRHP3-201ENST00000451503 251 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 AC007215.1-201ENST00000464893 276 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 SNORA40.14-201ENST00000516543 86 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 AC022868.1-201ENST00000517767 391 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 AC026470.2-201ENST00000561492 181 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 MIR5695-201ENST00000579717 85 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 MIR4635-201ENST00000583759 79 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 SNRPGP20-201ENST00000604477 205 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 SNORD58B-201ENST00000607313 66 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 AC138305.3-201ENST00000624988 240 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 ZNF204P-201ENST00000416749 2397 ntBASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TRIM43Q96BQ3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.8□□□□□ -1.96
TRIM43Q96BQ3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TRIM43Q96BQ3 AC091812.1-201ENST00000432235 1948 ntBASIC2.8□□□□□ -1.96
TRIM43Q96BQ3 Y_RNA.162-201ENST00000363683 102 ntBASIC2.8□□□□□ -1.96
TRIM43Q96BQ3 Y_RNA.485-201ENST00000384395 102 ntBASIC2.8□□□□□ -1.96
TRIM43Q96BQ3 MIR606-201ENST00000384851 96 ntBASIC2.8□□□□□ -1.96
TRIM43Q96BQ3 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.8□□□□□ -1.96
TRIM43Q96BQ3 AC007064.1-201ENST00000412238 351 ntBASIC2.8□□□□□ -1.96
TRIM43Q96BQ3 WARS2P1-201ENST00000429678 537 ntBASIC2.8□□□□□ -1.96
TRIM43Q96BQ3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.8□□□□□ -1.96
TRIM43Q96BQ3 AL445687.1-201ENST00000439946 251 ntBASIC2.8□□□□□ -1.96
TRIM43Q96BQ3 AC112492.4-201ENST00000456549 352 ntBASIC2.8□□□□□ -1.96
TRIM43Q96BQ3 RPS27AP9-201ENST00000477681 438 ntBASIC2.8□□□□□ -1.96
TRIM43Q96BQ3 AC103975.1-201ENST00000482506 483 ntBASIC2.8□□□□□ -1.96
TRIM43Q96BQ3 Y_RNA.721-201ENST00000517207 102 ntBASIC2.8□□□□□ -1.96
TRIM43Q96BQ3 AC090517.1-201ENST00000569307 266 ntBASIC2.8□□□□□ -1.96
TRIM43Q96BQ3 MIR5188-201ENST00000583467 113 ntBASIC2.8□□□□□ -1.96
TRIM43Q96BQ3 AC016727.2-201ENST00000603988 621 ntBASIC2.8□□□□□ -1.96
TRIM43Q96BQ3 AC005296.1-201ENST00000616145 209 ntBASIC2.8□□□□□ -1.96
TRIM43Q96BQ3 AL449363.1-201ENST00000617815 186 ntBASIC2.8□□□□□ -1.96
TRIM43Q96BQ3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.8□□□□□ -1.96
TRIM43Q96BQ3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.8□□□□□ -1.96
TRIM43Q96BQ3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.79□□□□□ -1.96
TRIM43Q96BQ3 BX322639.1-202ENST00000423987 2213 ntBASIC2.79□□□□□ -1.96
TRIM43Q96BQ3 RNU6-879P-201ENST00000364328 108 ntBASIC2.79□□□□□ -1.96
TRIM43Q96BQ3 RNU6-1160P-201ENST00000384546 104 ntBASIC2.79□□□□□ -1.96
TRIM43Q96BQ3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.79□□□□□ -1.96
TRIM43Q96BQ3 SNORA12-201ENST00000391162 147 ntBASIC2.79□□□□□ -1.96
TRIM43Q96BQ3 RPL21P3-201ENST00000395517 478 ntBASIC2.79□□□□□ -1.96
TRIM43Q96BQ3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.79□□□□□ -1.96
TRIM43Q96BQ3 AL356320.1-201ENST00000429616 163 ntBASIC2.79□□□□□ -1.96
TRIM43Q96BQ3 AL445305.1-201ENST00000432577 575 ntBASIC2.79□□□□□ -1.96
TRIM43Q96BQ3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.79□□□□□ -1.96
TRIM43Q96BQ3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.79□□□□□ -1.96
TRIM43Q96BQ3 AL161788.1-201ENST00000441805 169 ntBASIC2.79□□□□□ -1.96
TRIM43Q96BQ3 AC107032.1-201ENST00000485945 480 ntBASIC2.79□□□□□ -1.96
TRIM43Q96BQ3 AC132942.1-201ENST00000486753 483 ntBASIC2.79□□□□□ -1.96
TRIM43Q96BQ3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.79□□□□□ -1.96
TRIM43Q96BQ3 UBL5P4-201ENST00000562584 236 ntBASIC2.79□□□□□ -1.96
TRIM43Q96BQ3 AC090616.3-201ENST00000582184 217 ntBASIC2.79□□□□□ -1.96
TRIM43Q96BQ3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.79□□□□□ -1.96
TRIM43Q96BQ3 AC023043.3-201ENST00000593113 385 ntBASIC2.79□□□□□ -1.96
TRIM43Q96BQ3 RPS29P30-201ENST00000600975 111 ntBASIC2.79□□□□□ -1.96
TRIM43Q96BQ3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
TRIM43Q96BQ3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.78□□□□□ -1.96
TRIM43Q96BQ3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM43Q96BQ3 SNORD114-1-201ENST00000362705 72 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms