Protein–RNA interactions for Protein: Q15915

ZIC1, Zinc finger protein ZIC 1, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC1Q15915 AC009248.2-201ENST00000619826 254 ntBASIC1.67□□□□□ -2.14
ZIC1Q15915 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.67□□□□□ -2.14
ZIC1Q15915 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.67□□□□□ -2.14
ZIC1Q15915 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
ZIC1Q15915 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
ZIC1Q15915 RNU6-160P-201ENST00000384591 107 ntBASIC1.66□□□□□ -2.14
ZIC1Q15915 SNORA12.2-201ENST00000391040 156 ntBASIC1.66□□□□□ -2.14
ZIC1Q15915 RNU6-510P-201ENST00000391239 108 ntBASIC1.66□□□□□ -2.14
ZIC1Q15915 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.66□□□□□ -2.14
ZIC1Q15915 RPL30P16-201ENST00000419341 429 ntBASIC1.66□□□□□ -2.14
ZIC1Q15915 AC123900.1-201ENST00000420390 96 ntBASIC1.66□□□□□ -2.14
ZIC1Q15915 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.66□□□□□ -2.14
ZIC1Q15915 SNRPEP8-201ENST00000442866 260 ntBASIC1.66□□□□□ -2.14
ZIC1Q15915 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.66□□□□□ -2.14
ZIC1Q15915 MTND1P17-201ENST00000448961 204 ntBASIC1.66□□□□□ -2.14
ZIC1Q15915 OR2AQ1P-201ENST00000451972 200 ntBASIC1.66□□□□□ -2.14
ZIC1Q15915 RPL23AP75-201ENST00000491601 451 ntBASIC1.66□□□□□ -2.14
ZIC1Q15915 HMGB3P17-201ENST00000504195 649 ntBASIC1.66□□□□□ -2.14
ZIC1Q15915 RNU6-358P-201ENST00000516564 75 ntBASIC1.66□□□□□ -2.14
ZIC1Q15915 RNU6-566P-201ENST00000516790 107 ntBASIC1.66□□□□□ -2.14
ZIC1Q15915 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.66□□□□□ -2.14
ZIC1Q15915 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.66□□□□□ -2.14
ZIC1Q15915 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.66□□□□□ -2.14
ZIC1Q15915 AC087441.2-201ENST00000529141 262 ntBASIC1.66□□□□□ -2.14
ZIC1Q15915 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.66□□□□□ -2.14
ZIC1Q15915 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.66□□□□□ -2.14
ZIC1Q15915 MIR3683-201ENST00000580847 82 ntBASIC1.66□□□□□ -2.14
ZIC1Q15915 AC060780.3-201ENST00000589464 80 ntBASIC1.66□□□□□ -2.14
ZIC1Q15915 AC016727.2-201ENST00000603988 621 ntBASIC1.66□□□□□ -2.14
ZIC1Q15915 AL022345.1-201ENST00000607292 135 ntBASIC1.66□□□□□ -2.14
ZIC1Q15915 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.66□□□□□ -2.14
ZIC1Q15915 AL353997.5-201ENST00000618886 171 ntBASIC1.66□□□□□ -2.14
ZIC1Q15915 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.65□□□□□ -2.15
ZIC1Q15915 MIR340-201ENST00000362125 95 ntBASIC1.65□□□□□ -2.15
ZIC1Q15915 RNA5SP493-201ENST00000364115 91 ntBASIC1.65□□□□□ -2.15
ZIC1Q15915 SNORD114-6-201ENST00000364393 72 ntBASIC1.65□□□□□ -2.15
ZIC1Q15915 SNORD31B-201ENST00000364977 69 ntBASIC1.65□□□□□ -2.15
ZIC1Q15915 RNU6-438P-201ENST00000365561 103 ntBASIC1.65□□□□□ -2.15
ZIC1Q15915 MTATP6P13-201ENST00000438531 667 ntBASIC1.65□□□□□ -2.15
ZIC1Q15915 MTND2P29-201ENST00000438595 412 ntBASIC1.65□□□□□ -2.15
ZIC1Q15915 AL035666.1-201ENST00000446195 348 ntBASIC1.65□□□□□ -2.15
ZIC1Q15915 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.65□□□□□ -2.15
ZIC1Q15915 RPL23AP3-201ENST00000453844 468 ntBASIC1.65□□□□□ -2.15
ZIC1Q15915 RNU6-329P-201ENST00000459618 107 ntBASIC1.65□□□□□ -2.15
ZIC1Q15915 RPS23P5-201ENST00000495419 428 ntBASIC1.65□□□□□ -2.15
ZIC1Q15915 RNU6-237P-201ENST00000515985 71 ntBASIC1.65□□□□□ -2.15
ZIC1Q15915 SNORA25.15-201ENST00000516487 89 ntBASIC1.65□□□□□ -2.15
ZIC1Q15915 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.65□□□□□ -2.15
ZIC1Q15915 ANP32BP3-201ENST00000559213 706 ntBASIC1.65□□□□□ -2.15
ZIC1Q15915 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.65□□□□□ -2.15
ZIC1Q15915 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.65□□□□□ -2.15
ZIC1Q15915 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.65□□□□□ -2.15
ZIC1Q15915 MIR4255-201ENST00000579351 72 ntBASIC1.65□□□□□ -2.15
ZIC1Q15915 MIR3618-201ENST00000580330 88 ntBASIC1.65□□□□□ -2.15
ZIC1Q15915 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.65□□□□□ -2.15
ZIC1Q15915 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.65□□□□□ -2.15
ZIC1Q15915 AL590240.4-201ENST00000616908 390 ntBASIC1.65□□□□□ -2.15
ZIC1Q15915 AC137590.2-201ENST00000619709 240 ntBASIC1.65□□□□□ -2.15
ZIC1Q15915 AC130454.1-201ENST00000622948 401 ntBASIC1.65□□□□□ -2.15
ZIC1Q15915 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
ZIC1Q15915 RNA5SP190-201ENST00000365222 118 ntBASIC1.64□□□□□ -2.15
ZIC1Q15915 MIR487A-201ENST00000385009 80 ntBASIC1.64□□□□□ -2.15
ZIC1Q15915 MIR549A-201ENST00000385268 96 ntBASIC1.64□□□□□ -2.15
ZIC1Q15915 AL139396.1-201ENST00000421137 167 ntBASIC1.64□□□□□ -2.15
ZIC1Q15915 EIF4EP2-201ENST00000422816 654 ntBASIC1.64□□□□□ -2.15
ZIC1Q15915 AL353689.1-201ENST00000438895 199 ntBASIC1.64□□□□□ -2.15
ZIC1Q15915 RPL23AP6-201ENST00000446637 472 ntBASIC1.64□□□□□ -2.15
ZIC1Q15915 SNORD13-201ENST00000459299 104 ntBASIC1.64□□□□□ -2.15
ZIC1Q15915 AC018710.1-201ENST00000506509 158 ntBASIC1.64□□□□□ -2.15
ZIC1Q15915 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.64□□□□□ -2.15
ZIC1Q15915 RNU1-54P-201ENST00000517181 120 ntBASIC1.64□□□□□ -2.15
ZIC1Q15915 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.64□□□□□ -2.15
ZIC1Q15915 AC104581.2-201ENST00000572227 430 ntBASIC1.64□□□□□ -2.15
ZIC1Q15915 MIR3169-201ENST00000578032 83 ntBASIC1.64□□□□□ -2.15
ZIC1Q15915 MIR4742-201ENST00000581069 85 ntBASIC1.64□□□□□ -2.15
ZIC1Q15915 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.64□□□□□ -2.15
ZIC1Q15915 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.64□□□□□ -2.15
ZIC1Q15915 AC005562.2-201ENST00000618264 111 ntBASIC1.64□□□□□ -2.15
ZIC1Q15915 uc_338.20-201ENST00000621563 178 ntBASIC1.64□□□□□ -2.15
ZIC1Q15915 SCARNA4-201ENST00000629045 128 ntBASIC1.64□□□□□ -2.15
ZIC1Q15915 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.64□□□□□ -2.15
ZIC1Q15915 LINC02555-201ENST00000563933 1951 ntBASIC1.64□□□□□ -2.15
ZIC1Q15915 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
ZIC1Q15915 RNU6-23P-201ENST00000363283 107 ntBASIC1.63□□□□□ -2.15
ZIC1Q15915 U8.10-201ENST00000384260 133 ntBASIC1.63□□□□□ -2.15
ZIC1Q15915 RNU6-1026P-201ENST00000384465 108 ntBASIC1.63□□□□□ -2.15
ZIC1Q15915 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
ZIC1Q15915 SNORA17.3-201ENST00000391159 129 ntBASIC1.63□□□□□ -2.15
ZIC1Q15915 AL356776.1-201ENST00000406574 447 ntBASIC1.63□□□□□ -2.15
ZIC1Q15915 AC016925.1-201ENST00000458303 298 ntBASIC1.63□□□□□ -2.15
ZIC1Q15915 AC007215.1-201ENST00000464893 276 ntBASIC1.63□□□□□ -2.15
ZIC1Q15915 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.63□□□□□ -2.15
ZIC1Q15915 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.63□□□□□ -2.15
ZIC1Q15915 AC026470.2-201ENST00000561492 181 ntBASIC1.63□□□□□ -2.15
ZIC1Q15915 MIR4790-201ENST00000577799 79 ntBASIC1.63□□□□□ -2.15
ZIC1Q15915 AC010928.2-201ENST00000588017 287 ntBASIC1.63□□□□□ -2.15
ZIC1Q15915 AC011712.1-201ENST00000588959 234 ntBASIC1.63□□□□□ -2.15
ZIC1Q15915 AC243960.4-201ENST00000600532 288 ntBASIC1.63□□□□□ -2.15
ZIC1Q15915 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.63□□□□□ -2.15
ZIC1Q15915 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms