Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.43□□□□□ -2.34
UBBP0CG47 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.43□□□□□ -2.34
UBBP0CG47 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.43□□□□□ -2.34
UBBP0CG47 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.43□□□□□ -2.34
UBBP0CG47 GPR143P-201ENST00000434155 205 ntBASIC0.43□□□□□ -2.34
UBBP0CG47 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.43□□□□□ -2.34
UBBP0CG47 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.43□□□□□ -2.34
UBBP0CG47 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.43□□□□□ -2.34
UBBP0CG47 AC079781.2-201ENST00000446424 169 ntBASIC0.43□□□□□ -2.34
UBBP0CG47 AC009237.7-201ENST00000447357 229 ntBASIC0.43□□□□□ -2.34
UBBP0CG47 NFU1P2-201ENST00000448700 469 ntBASIC0.43□□□□□ -2.34
UBBP0CG47 BET1P1-201ENST00000482276 359 ntBASIC0.43□□□□□ -2.34
UBBP0CG47 COX6CP6-201ENST00000490840 228 ntBASIC0.43□□□□□ -2.34
UBBP0CG47 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.43□□□□□ -2.34
UBBP0CG47 RNA5SP255-201ENST00000516370 107 ntBASIC0.43□□□□□ -2.34
UBBP0CG47 RNU6-948P-201ENST00000516374 107 ntBASIC0.43□□□□□ -2.34
UBBP0CG47 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.43□□□□□ -2.34
UBBP0CG47 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.43□□□□□ -2.34
UBBP0CG47 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.43□□□□□ -2.34
UBBP0CG47 MIR4753-201ENST00000585119 83 ntBASIC0.43□□□□□ -2.34
UBBP0CG47 Z99497.2-201ENST00000603634 310 ntBASIC0.43□□□□□ -2.34
UBBP0CG47 MIR8054-201ENST00000620877 86 ntBASIC0.43□□□□□ -2.34
UBBP0CG47 AL513423.1-201ENST00000621695 132 ntBASIC0.43□□□□□ -2.34
UBBP0CG47 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.43□□□□□ -2.34
UBBP0CG47 AL603839.4-201ENST00000624658 1005 ntBASIC0.43□□□□□ -2.34
UBBP0CG47 AP000720.1-201ENST00000625091 483 ntBASIC0.43□□□□□ -2.34
UBBP0CG47 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.43□□□□□ -2.34
UBBP0CG47 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.42□□□□□ -2.34
UBBP0CG47 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
UBBP0CG47 RNA5SP361-201ENST00000362686 118 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 RNY1P12-201ENST00000364251 105 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 RNU6-434P-201ENST00000384376 107 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 MIR1-2-201ENST00000384961 85 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 MIR586-201ENST00000385035 97 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 RNA5SP504-201ENST00000410676 117 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 RNU6-321P-201ENST00000410912 106 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 RPS3AP1-201ENST00000413190 320 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 AC106883.1-201ENST00000418805 562 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 AC090960.1-201ENST00000421072 306 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.42□□□□□ -2.34
UBBP0CG47 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.42□□□□□ -2.34
UBBP0CG47 AC005002.2-201ENST00000438228 269 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 AC004386.2-201ENST00000441858 148 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.42□□□□□ -2.34
UBBP0CG47 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.42□□□□□ -2.34
UBBP0CG47 AC108729.3-201ENST00000513484 108 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 RNA5SP121-201ENST00000516537 101 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 AC026470.2-201ENST00000561492 181 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 CYP3A137P-201ENST00000562436 69 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.42□□□□□ -2.34
UBBP0CG47 AC104984.5-201ENST00000586878 94 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 AC068790.2-201ENST00000602601 557 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 AC009229.3-201ENST00000608056 282 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 TUSC7.1-201ENST00000610969 165 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 GHRLOS.1-201ENST00000610995 70 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 AL133173.2-201ENST00000614270 90 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 AC006001.4-201ENST00000622243 395 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 AC005858.4-201ENST00000623191 700 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 SNORD3E-202ENST00000627253 216 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 U6.114-201ENST00000636407 96 ntBASIC0.42□□□□□ -2.34
UBBP0CG47 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
UBBP0CG47 RNU6-950P-201ENST00000384651 107 ntBASIC0.41□□□□□ -2.34
UBBP0CG47 MIR620-201ENST00000385232 95 ntBASIC0.41□□□□□ -2.34
UBBP0CG47 MIR660-201ENST00000385235 97 ntBASIC0.41□□□□□ -2.34
UBBP0CG47 RNU6-195P-201ENST00000411352 109 ntBASIC0.41□□□□□ -2.34
UBBP0CG47 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.41□□□□□ -2.34
UBBP0CG47 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.41□□□□□ -2.34
UBBP0CG47 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.41□□□□□ -2.34
UBBP0CG47 MTCO3P8-201ENST00000453691 755 ntBASIC0.41□□□□□ -2.34
UBBP0CG47 snoU13.25-201ENST00000458945 104 ntBASIC0.41□□□□□ -2.34
UBBP0CG47 RNU7-182P-201ENST00000459009 62 ntBASIC0.41□□□□□ -2.34
UBBP0CG47 AC098869.1-201ENST00000481627 292 ntBASIC0.41□□□□□ -2.34
UBBP0CG47 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.41□□□□□ -2.34
UBBP0CG47 RPL39P5-202ENST00000512505 151 ntBASIC0.41□□□□□ -2.34
UBBP0CG47 RNU4-54P-201ENST00000516428 129 ntBASIC0.41□□□□□ -2.34
UBBP0CG47 RNU6-323P-201ENST00000521915 107 ntBASIC0.41□□□□□ -2.34
UBBP0CG47 DEFB108E-201ENST00000524692 240 ntBASIC0.41□□□□□ -2.34
UBBP0CG47 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.41□□□□□ -2.34
UBBP0CG47 AL391840.1-201ENST00000571144 367 ntBASIC0.41□□□□□ -2.34
UBBP0CG47 AC004223.4-201ENST00000612426 332 ntBASIC0.41□□□□□ -2.34
UBBP0CG47 TCL6_2.1-201ENST00000615162 119 ntBASIC0.41□□□□□ -2.34
UBBP0CG47 MIR6715A-201ENST00000615929 79 ntBASIC0.41□□□□□ -2.34
UBBP0CG47 RNU1-93P-201ENST00000364704 169 ntBASIC0.4□□□□□ -2.35
UBBP0CG47 Y_RNA.598-201ENST00000410480 95 ntBASIC0.4□□□□□ -2.35
UBBP0CG47 RPS3AP3-201ENST00000411933 242 ntBASIC0.4□□□□□ -2.35
UBBP0CG47 AL035398.1-201ENST00000430869 322 ntBASIC0.4□□□□□ -2.35
UBBP0CG47 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.4□□□□□ -2.35
UBBP0CG47 MTCO2P3-201ENST00000442543 421 ntBASIC0.4□□□□□ -2.35
UBBP0CG47 GMFBP1-201ENST00000467831 427 ntBASIC0.4□□□□□ -2.35
UBBP0CG47 MTND2P14-201ENST00000482139 351 ntBASIC0.4□□□□□ -2.35
UBBP0CG47 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.4□□□□□ -2.35
UBBP0CG47 HMGB1P29-201ENST00000505659 499 ntBASIC0.4□□□□□ -2.35
UBBP0CG47 RNU6-1146P-201ENST00000516282 102 ntBASIC0.4□□□□□ -2.35
UBBP0CG47 RNU6-917P-201ENST00000516294 104 ntBASIC0.4□□□□□ -2.35
UBBP0CG47 RNA5SP102-201ENST00000516865 106 ntBASIC0.4□□□□□ -2.35
UBBP0CG47 AC025647.1-201ENST00000517879 253 ntBASIC0.4□□□□□ -2.35
UBBP0CG47 AC011604.1-201ENST00000545978 196 ntBASIC0.4□□□□□ -2.35
UBBP0CG47 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.4□□□□□ -2.35
UBBP0CG47 MIR548AB-201ENST00000584917 84 ntBASIC0.4□□□□□ -2.35
UBBP0CG47 RSL24D1P11-201ENST00000591045 491 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 300.8 ms